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Researcher
Yvan Saeys
Profile
Projects
Publications
Activities
Awards & Distinctions
Results
:
ALL
(
39
)
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Title (a-z)
Title (a-z)
Chronological by starting year (new to old)
As
Promotor-spokesperson
01 January 2024 → 31 December 2028
Single-cell SPACE, the next frontier
Funding: Regional and community funding: Special Research Fund
01 January 2018 → 31 December 2022
Unravelling cellular heterogeneity and dynamics in normal and malignant hematopoiesis using singlecell bioinformatics
Funding: Regional and community funding: Special Research Fund
As
Promotor
01 October 2017 → 30 September 2018
A formal characterization of the robustness of deep learning techniques
Fellow: Jonathan Peck
Funding: Regional and community funding: Special Research Fund
01 October 2018 → 30 September 2022
A Formal Characterization of the Robustness of Deep Neural Networks to Adversarial Perturbations
Fellow: Jonathan Peck
Funding: Research Foundation - Flanders (FWO)
01 November 2021 → 31 October 2025
Aligning patient specific cell development trajectories.
Fellow: Louise Deconinck
Funding: Research Foundation - Flanders (FWO)
01 May 2009 → 31 August 2027
Alliance Research Group: Logic Engineering
Funding: Ghent University funding
01 January 2019 → 31 December 2022
An exploratory study of machine learning techniques for imaging flow cytometry
Fellow: Maxim Lippeveld
Funding: Research Foundation - Flanders (FWO)
01 November 2020 → 31 October 2024
A quantitative evaluation of deep learning techniques for unsupervised and supervised analysis of high-dimensional cytometry data
Fellow: David Novák
Funding: Research Foundation - Flanders (FWO)
01 January 2022 → 31 December 2025
Cell-cell cOmmuNicaTion As a driver of Cancer cell state identiTy - Decoding the impact of cell-cell communications on the identity of tumor states in skin cancers
Funding: Research Foundation - Flanders (FWO)
01 October 2021 → 30 September 2024
Clinical applications of computational cytometry
Fellow: Sofie Van Gassen
Funding: Regional and community funding: Special Research Fund
01 October 2022 → 30 November 2025
Computational cytometry techniques for clinical applications
Fellow: Sofie Van Gassen
Funding: Research Foundation - Flanders (FWO)
01 October 2014 → 30 September 2018
Dealing with Imbalanced and Weakly Labeled Data in Machine Learning using Fuzzy and Rough Set Methods
Fellow: Sarah Vluymans
Funding: Regional and community funding: Special Research Fund
01 January 2020 → 31 December 2030
Digital innovation for man and society
Funding: Regional and community funding: Special Research Fund
01 October 2016 → 31 July 2021
Dissecting the regulatory dynamics that govern Kupffer cell differentiation
Funding: Regional and community funding: Special Research Fund
01 November 2020 → 31 October 2021
Dissecting tissue spatial organization using machine learning and spatial transcriptomics
Fellow: Lotte Pollaris
Funding: Regional and community funding: Special Research Fund
01 October 2018 → 30 September 2021
Improving the Diagnosis and Prognosis of Primary Immunodeficiencies using Computational Flow Cytometry
Fellow: Sofie Van Gassen
Funding: Research Foundation - Flanders (FWO)
01 November 2021 → 31 October 2025
Interpretable models for integrative single-cell spatial transcriptomics
Fellow: Lotte Pollaris
Funding: Research Foundation - Flanders (FWO)
01 October 2018 → 30 September 2021
Mining of large-scale single-cell data with deep learning and parallel multi-instance algorithms
Fellow: Daniel Peralta Cámara
Funding: Research Foundation - Flanders (FWO)
01 October 2021 → 30 September 2025
Modelling intercellular communication in time and space
Fellow: Chananchida Sang-aram
Funding: Regional and community funding: Special Research Fund
01 October 2017 → 30 September 2021
Modelling intercellular signaling events during cellular differentiation from single-cell transcriptomics data
Fellows: Robin Browaeys
Funding: Research Foundation - Flanders (FWO)
01 January 2020 → 31 December 2023
Quantifying neural network interpretability: a benchmarking approach
Fellow: Arne Gevaert
Funding: Regional and community funding: Special Research Fund
01 January 2024 → 31 December 2024
TAILOR A Network of Research Excellence Centres
Funding: European funding: various
01 January 2024 → 31 December 2025
Trustworthy machine learning models for single-cell and spatial omics data
Funding: Regional and community funding: Special Research Fund
01 October 2015 → 30 September 2019
Unraveling the functional specialization of macrophages and dendritic cells using gene module networks and cell-cell signaling networks.
Fellow: Wouter Saelens
Funding: Research Foundation - Flanders (FWO)
As
Copromotor
01 November 2019 → 31 October 2023
A human pluripotent stem cell derived differentiation model for the study of normal and transformed sympathoadrenal progenitors
Fellow: Stéphane Van Haver
Funding: Research Foundation - Flanders (FWO)
01 May 2024 → 30 April 2028
FullPicture: Combining Spectral Flow Cytometry with High-Speed Cell Imaging to enable comprehensive profiling of plant and animal cells and their components in real time.
Funding: Research Foundation - Flanders (FWO)
01 January 2019 → 31 December 2022
How T cell autoreactivity develops in early rheumatoid arthritis: the smoking gun hypothesis
Funding: Research Foundation - Flanders (FWO)
01 November 2020 → 13 August 2023
‘Immunodeficiency-causing IKAROS mutations in the bright sunlight’, A comprehensive study characterizing the genetic and immunological heterogeneity in IKAROS-mediated immune diseases.
Fellow: Lisa Roels
Funding: Research Foundation - Flanders (FWO)
01 October 2014 → 01 June 2016
Multi-labeled semi-supervised learning in big data problem
Fellow: Isaac Triguero
Funding: Regional and community funding: Special Research Fund
01 May 2022 → 30 April 2026
SpatialConnect: linking tissue biology to the new era of single-cell spatial transcriptomics
Funding: Research Foundation - Flanders (FWO)
01 May 2020 → 30 April 2024
The BD FACS Symphony FACS cell sorter: the most advanced multiparameter fluorescence activated cell sorter that allows the identification and purification of rare cells for further functional characterization
Funding: Research Foundation - Flanders (FWO)
01 November 2021 → 31 October 2025
Understanding the role of nuclear receptor HNF4a in sepsis and unravel the mechanisms of its loss-of-function in relation to PPARa failure.
Fellow: Céline Van Dender
Funding: Research Foundation - Flanders (FWO)
01 November 2019 → 31 October 2023
Unraveling the choroid plexus heterogeneity and its consequences on the biological response to inflammation.
Fellow: Daan Verhaege
Funding: Research Foundation - Flanders (FWO)
01 October 2014 → 01 October 2015
Unraveling the regulatory landscape of dendritic cells using module networks.
Fellow: Wouter Saelens
Funding: Regional and community funding: Special Research Fund
As
Fellow
01 October 2007 → 30 September 2013
An exploratory study of feature selection techniques for unsupervised learning
Fellow: Yvan Saeys
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
As
Researcher
15 April 2020 → 14 April 2021
CONDITIONAL: COvid-19: iNterplay between genetic preDisposITION and immunologicAl Landscape
Funding: Regional and community funding: Special Research Fund
15 April 2020 → 14 April 2021
Covid-Track: applying quantitative virology and single-cell genomics to unravel the virus-host interactions leading to severe immunopathologies in COVID-19 patients
Funding: Regional and community funding: Special Research Fund
01 October 2018 → 30 September 2022
Role of intestinal barrier dysfunction for the pathogenesis of spondyloarthritis
Fellow: Ann-Sophie De Craemer
Funding: Regional and community funding: Special Research Fund
01 January 2021 → 31 December 2027
Understanding the immunological basis of persistent airway obstruction in asthma
Funding: Regional and community funding: Special Research Fund