Petra Van Damme

Complementary use of ribosome profiling and positional proteomics for mapping the translation initiation and nascent protein modification landscape in human cell lines

Preparative and analytical ultracentrifugation to aid integrative, multi-omics studies.

Proteogenomic-assisted exploration of the molecular mechanisms underlying Salmonella infection

Riboproteogenomics in aid of bacterial pathogen/host interaction studies

The study of N-terminal protein variants, their stability and localization by means of ribosome profiling and positional proteomics

Translational control in infection biology: the role of sORFs in Salmonella pathogenesis. 

Unraveling the heterogeneous nature of host/pathogen encounters and their role in bacterial pathogenesis.

A MALDI-8020 mass spectrometer for peptide and protein analysis.

Development of C-terminal peptide-based proteome-analytical strategies and the extensive mapping of the granzyme substrate-repertoire

Identification of in planta secreted fungal effectors and characterization of their interacting tomato proteins to ameliorate arbuscular mycorrhiza-based agriculture

Mapping the tomato protein network exploited by type III effectors involved in bacterial wilt

Protein interplay during the establishment of arbuscular mycorrhiza: revealing the function of tomato root proteins interacting with fungal plant effectors

Towards molecular insights into the arbuscular mycorrhizal fungal-plant interface for improved tomato yield upon drought.

Granzyme-mediated cell-targeted and antiviral methods-of-action: a targeted proteomic analysis