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Researcher
Yves Van de Peer
Profile
Projects
Publications
Activities
Awards & Distinctions
Results
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ALL
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92
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Title (a-z)
Title (a-z)
Chronological by starting year (new to old)
As
Promotor-spokesperson
01 January 2019 → 31 August 2020
Molecular adaptation to polyploidy in Australian burrowing frogs Neobatrachus
Fellow: Polina Novikova
Funding: Research Foundation - Flanders (FWO)
As
Administrative supervisor
07 September 2021 → 21 September 2025
An eco-evolutionary perspective on the invasion dynamics of polyploids
Doctoral researcher: Silvija Milosavljević
16 September 2019 → 17 November 2023
Annotation and comparative analysis of seagrass and African crop genomes
Doctoral researcher: Xiao Ma
26 September 2017 → 07 October 2022
Bayesian statistical methods in evolutionary genomics
Doctoral researcher: Arthur Zwaenepoel
04 May 2021 → 23 September 2021
Chromosome level assembly of the genome sequences of Malus x domestica (Apple) and Pyrus communis (European pear)
Doctoral researcher: Gareth Linsmith
31 January 2018 → 23 November 2023
CoMuTER – a Cas3-base editing tool for targetable in vivo mutagenesis
Doctoral researcher: Anna Sophie Zimmermann
03 January 2020 → 06 March 2024
Deciphering Genomic Dynamics: Locust Swarming, Cassava Resistance, and Unveiling Whole Genome Duplication for Evolutionary Understanding
Doctoral researcher: Jia Li
03 January 2020 → 07 October 2024
Decoding Whole-Genome Duplication: Insights from Spirodela Polyrhiza as a Model System
Doctoral researcher: Tian Wu
24 March 2011 → 22 September 2013
Doctoral project Aliaksandr Hryzlou
Doctoral researcher: Aliaksandr Hryzlou
08 April 2009 → 22 September 2013
Doctoral project Bing Li
Doctoral researcher: Bing Li
13 October 2014 → 29 January 2016
Doctoral project Bram Verhelst
Doctoral researcher: Bram Verhelst
17 January 2012 → 07 March 2013
Doctoral project Emilio Potenza
Doctoral researcher: Emilio Potenza
10 May 2010 → 25 September 2016
Doctoral project Evangelia Dougali
Doctoral researcher: Evangelia Dougali
11 September 2020 → 21 September 2025
Doctoral project Hengchi Chen
Doctoral researcher: Hengchi Chen
11 September 2020 → 21 September 2025
Doctoral project Jiyang Chang
Doctoral researcher: Jiyang Chang
19 December 2013 → 29 March 2018
Doctoral project Jonas Defoort
Doctoral researcher: Jonas Defoort
21 August 2018 → 21 September 2025
Doctoral project Lucas Prost
Doctoral researcher: Lucas Prost
14 December 2020 → 21 September 2025
Doctoral project Mehrshad Ebadi
Doctoral researcher: Mehrshad Ebadi
24 September 2012 → 13 December 2012
Doctoral project Michiel Van Bel
Doctoral researcher: Michiel Van Bel
06 November 2008 → 25 September 2011
Doctoral project Pedro Pattyn
Doctoral researcher: Pedro Pattyn
01 April 2009 → 23 September 2012
Doctoral project Sandra Cristina Milheiro Cabral Botelho
Doctoral researcher: Sandra Cristina Milheiro Cabral Botelho
20 December 2011 → 08 June 2012
Doctoral project Sara Movahedi
Doctoral researcher: Sara Movahedi
22 January 2008 → 29 March 2012
Doctoral project Sebastian Proost
Doctoral researcher: Sebastian Proost
13 October 2015 → 13 November 2020
Doctoral project Shu-Min Kao
Doctoral researcher: Shu-Min Kao
20 August 2015 → 07 May 2020
Doctoral project Srilakshmy Lakshminarayanapuram Harikrishnan
Doctoral researcher: Srilakshmy Lakshminarayanapuram Harikrishnan
18 August 2015 → 24 September 2017
Doctoral project Tim Diels
Doctoral researcher: Tim Diels
01 October 2012 → 25 September 2016
Doctoral project Xiaoguang Yu
Doctoral researcher: Xiaoguang Yu
15 January 2015 → 29 September 2015
Doctoral project Yao Yao
Doctoral researcher: Yao Yao
20 December 2011 → 20 December 2011
Doctoral project Ying He
Doctoral researcher: Ying He
02 September 2014 → 23 September 2018
Doctoral project Zaichao Zhang
Doctoral researcher: Zaichao Zhang
14 September 2012 → 19 April 2018
Doctoral project Zhen Li
Doctoral researcher: Zhen Li
09 September 2021 → 21 September 2025
Effect of genome merging and duplication on gene expression and fitness in Chlamydomonas
Doctoral researcher: Antoine Van de Vloet
26 August 2024 → 21 September 2025
Evolution of regulatory networks of angiosperm flowering.
Doctoral researcher: Xuefen Wei
17 August 2016 → 28 August 2024
Experimental exploration of the evolutionary potential of polyploid plants
Doctoral researcher: Quinten Bafort
17 January 2017 → 31 January 2023
Exploring genetic variability of <i>Pinus pinaster </i>in the molecular response pathways to the pine wood nematode as a source of markers for assisted selection
Doctoral researcher: Inês Sofia Barrios Modesto
12 October 2021 → 25 September 2024
Insights into Plant Genomic Evolution: Platycarya Adaptation, Fagales Karyotype Evolution, and Angiosperm Phylogeny
Doctoral researcher: Yu Cao
15 July 2021 → 21 September 2025
Life with more than one genome: studying the relationship between genome complexity and polyploidy
Doctoral researcher: Ewout Crombez
15 December 2023 → 21 September 2025
Phylogeny and evolution of land plants
Doctoral researcher: Shuaiya Hu
02 April 2021 → 20 December 2023
Speciation dynamics: contrasts between plants and animals
Doctoral researcher: François Monnet
30 September 2024 → 21 September 2025
Study of the evolutionary history of scaly tree ferns (Cyatheaceae).
Doctoral researcher: Zuoying Wei
21 January 2022 → 21 September 2025
The impact of polyploidy on plant gene regulatory networks
Doctoral researcher: Fabricio De Almeida Silva
21 June 2021 → 21 September 2025
The spatial ecology of polyploids as inferred from mechanistic and phenomical models
Doctoral researcher: Felipe Kauai Pereira
As
PhD Supervisor
06 July 2011 → 22 September 2013
Doctoral project Gustavo Adolfo Torres Torres
Doctoral researcher: Gustavo Adolfo Torres Torres
13 October 2014 → 25 March 2015
Doctoral project Ken Heyndrickx
Doctoral researcher: Ken Heyndrickx
01 July 2014 → 18 June 2019
Doctoral project Mahdi Heydari
Doctoral researcher: Mahdi Heydari
As
Promotor
01 October 2007 → 30 September 2013
An exploratory study of feature selection techniques for unsupervised learning
Fellow: Yvan Saeys
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 October 2007 → 01 October 2008
A thorough analysis of similarity measures for learning from heterogeneous data sources
Funding: Regional and community funding: Special Research Fund
01 April 2007 → 31 March 2011
Bioframe, a bioinformatics framework for top down systems biology
Funding: Regional and community funding: various
01 January 2007 → 31 March 2012
Bioinformatics and modeling: from genomes to networks
Funding: Federal funding: various
01 May 2010 → 30 April 2017
Bioinformatics: from nucleotids to networks (N2N)
Funding: Regional and community funding: Special Research Fund
01 May 2010 → 30 April 2017
Bioinformatics: from nucleotids to networks (N2N)
Funding: Regional and community funding: Special Research Fund
01 October 2014 → 30 September 2018
Comparative analysis of three spider mite genomes: uncovering genomic signatures to explain different feeding models of major agricultural pests
Fellow: Zaichao Zhang
Funding: Regional and community funding: Special Research Fund
01 October 2010 → 31 October 2014
Computational genome annotation with the aid of next-generation transcriptoomdata.
Fellow: Thomas Abeel
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 October 2009 → 16 June 2011
Contrast different evolutionary models to the observed genome architecture of several plant species
Fellow: Cedric Simillion
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 October 2015 → 30 September 2018
Convergent evolution of host adaptation in plant pathogenic fungi.
Fellow: Ronnie de Jonge
Funding: Research Foundation - Flanders (FWO)
16 October 2017 → 30 September 2018
Development of a computational platform for the detection and dating of whole genome duplications in plants, and their structural and functional interpretation
Fellow: Arthur Zwaenepoel
Funding: Regional and community funding: Special Research Fund
01 October 2023 → 30 September 2026
Do polyploid phenotypes facilitate their establishment: temporary existence or consistent persistence
Fellow: Frederik Mortier
Funding: Research Foundation - Flanders (FWO)
01 January 2019 → 31 December 2022
ELIXIR Infrastructure for Data and Services to strengthen Life-Sciences Research in Flanders
Funding: Research Foundation - Flanders (FWO)
01 October 2013 → 30 September 2018
ERC Professorship: DOUBLE-UP
Funding: Regional and community funding: Special Research Fund
01 October 2007 → 30 September 2011
Evolutionary analysis of transcriptional regulation in plants and other eukaryotes.
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 January 2013 → 31 December 2018
Evolving network patterns
Funding: Research Foundation - Flanders (FWO)
01 October 2017 → 30 September 2021
experimental exploration of the uncertain road from whole genome duplication to evolutionary success
Fellow: Quinten Bafort
Funding: Research Foundation - Flanders (FWO)
01 January 2007 → 31 December 2010
FlexWare: Exploitation of Flexible Hardware Platforms for Massively Parallel Bioinformatics Applications
Funding: Regional and community funding: IWT/VLAIO
01 October 2012 → 01 October 2013
Functional and evolutionary characterisation of angiosperm single-copy gene families
Funding: Regional and community funding: Special Research Fund
01 October 2018 → 30 September 2021
Gene duplicability and gene expression changes following gene and genome duplication
Fellow: Zhen Li
Funding: Regional and community funding: Special Research Fund
01 January 2019 → 31 December 2022
Identification of the major determinants that explain intolerance to gene duplication in the flowering plants
Funding: Research Foundation - Flanders (FWO)
01 October 2008 → 31 January 2013
Integrated analysis of high throughput transcriptome and genomic data for modeling of molecular pathways underlying interactions between the malaria parasite Plasmodium falciparum and the mend.
Fellow: Nathalie Pochet
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 January 2008 → 30 December 2013
Integration of genomic data for analysis of genome-evolution and transcirptional regulation in plants
Funding: Research Foundation - Flanders (FWO)
01 October 2008 → 30 September 2012
Knowledge discovery for biological processes by integraing heterogeneous data sources
Fellow: Sofie Van Landeghem
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 October 2012 → 31 December 2014
Mining the bibliome to help unravel the dynamic behaviour of molecular networks
Fellow: Sofie Van Landeghem
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 October 2018 → 30 September 2022
On the short and long term establishment of polyploidy in plant evolution
Fellow: Arthur Zwaenepoel
Funding: Research Foundation - Flanders (FWO)
01 October 2017 → 31 August 2020
Polyploidy and adaptation in Neobatrachus frogs
Fellow: Polina Novikova
Funding: Research Foundation - Flanders (FWO)
01 January 2014 → 31 December 2019
Production of secretory VHH-IgA based antibodies in plants for passive mucosal immunization
Funding: Research Foundation - Flanders (FWO)
01 October 2010 → 05 January 2016
Research on the organization and conservation of transcriptional regulation in plants on the basis of experimental high-throughput data
Fellow: Ken Heyndrickx
Funding: Regional and community funding: IWT/VLAIO
01 November 2023 → 31 October 2027
Size, metabolism and resource allocation as drivers of polyploid success
Fellow: Silvija Milosavljević
Funding: Research Foundation - Flanders (FWO)
01 February 2023 → 31 January 2026
Special Research Fund Professorship in Phylogeny and comparative analysis
Fellow: Yves Van de Peer
Funding: Regional and community funding: Special Research Fund
01 January 2021 → 31 December 2027
Studying the mechanistic underpinnings and applications of polyploidy through genomics, experimental evolution, modeling, and Artificial Intelligence
Funding: Regional and community funding: Special Research Fund
01 October 2009 → 30 September 2013
Study of the mechanisms responsible for evolutionairy innovation by gen(om)e duplication
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 October 2014 → 30 September 2017
Testing big evolutionary hypotheses with small organisms
Fellow: Kevin Vanneste
Funding: Regional and community funding: Special Research Fund
01 September 2019 → 31 August 2023
The evolution of orchid and seagrass genomes
Fellow: Xiao Ma
Funding: Regional and community funding: Special Research Fund
01 January 2012 → 31 December 2017
The impact of dosage-sensitive gene families on plant evolution and their use as genome duplication markers
Funding: Research Foundation - Flanders (FWO)
01 October 2007 → 30 September 2013
The impact of gene and genome duplications on the evolution of development in angiosperms
Fellow: Steven Maere
Funding: Regional and community funding: Special Research Fund, Research Foundation - Flanders (FWO)
01 January 2019 → 31 December 2022
The role of DNA methylation in locust swarming behaviour
Funding: Research Foundation - Flanders (FWO)
01 October 2013 → 01 May 2017
Unraveling the universal principles underlying duplication resistance in plant and animal genomes.
Fellow: Riet De Smet
Funding: Research Foundation - Flanders (FWO), Regional and community funding: Special Research Fund
01 November 2020 → 31 October 2024
When Genomes Team Up: investigation of the immediate effects of alloploidization on fitness and gene expression
Fellow: Lucas Prost
Funding: Research Foundation - Flanders (FWO)
As
Copromotor
01 January 2009 → 31 May 2012
Biotechnological Production Platform for new Tailor-made Glycolipid Biosurfactants
Funding: Regional and community funding: various
01 January 2014 → 31 December 2019
De novo genome assembly using both second and third generation sequencing data
Funding: Research Foundation - Flanders (FWO)
01 January 2023 → 31 December 2026
ELIXIR Infrastructure for Data and Services to strengthen Life-Sciences Research in Flanders
Funding: Research Foundation - Flanders (FWO)
01 March 2007 → 15 September 2009
Gene expression
Funding: Federal funding: various
01 January 2016 → 31 December 2019
Testing big evolutionary hypotheses with small organisms
Funding: Research Foundation - Flanders (FWO)
01 October 2018 → 30 September 2021
The Modern versus Extended Evolutionary Synthesis: an intra-genomic gene's eye view for the evolution-theoretic underpinning of molecular and developmental epigenetics
Fellow: Alexis De Tiège
Funding: Regional and community funding: Special Research Fund
As
Fellow
01 February 2023 → 31 January 2026
Special Research Fund Professorship in Phylogeny and comparative analysis
Fellow: Yves Van de Peer
Funding: Regional and community funding: Special Research Fund