Research Explorer

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Researcher

Stijn Dhondt

Awards & Distinctions

53 Results

2023

PhenoWell® : a novel screening system for soil‐grown plants

Ji LiMichael MintgenSam D'HaeyerAnne HelferHilde NelissenDirk InzéStijn Dhondt

A2 Journal Article in PLANT-ENVIRONMENT INTERACTIONS

Spectral correction and dimensionality reduction of hyperspectral images for plant water stress assessment

Lin Jian WenMohd Shahrimie Mohd AsaariStijn Dhondt

A2 Journal Article in PERTANIKA JOURNAL OF SCIENCE AND TECHNOLOGY

2021

Drought affects the rate and duration of organ growth but not inter-organ growth coordination

Lennart VerbraekenNathalie WuytsStien MertensBernard CannootKatrien MaleuxKirin DemuynckJolien De BlockJulie MerchieStijn DhondtGustavo Bonaventure et al.

A1 Journal Article in PLANT PHYSIOLOGY

Nocturnal gibberellin biosynthesis is carbon dependent and adjusts leaf expansion rates to variable conditions

Putri PrasetyaningrumLorenzo MariottiMaria Cristina ValeriGiacomo NoviStijn DhondtDirk InzéPierdomenico PerataHans van Veen

A1 Journal Article in PLANT PHYSIOLOGY

2019

Analysis of hyperspectral images for detection of drought stress and recovery in maize plants in a high-throughput phenotyping platform

Mohd Shahrimie Mohd AsaariStien MertensStijn DhondtDirk InzéNathalie WuytsPaul Scheunders

A1 Journal Article in COMPUTERS AND ELECTRONICS IN AGRICULTURE

Drought resistance is mediated by divergent strategies in closely related Brassicaceae

Nora Marín‐de la RosaChung‐Wen LinYang Jae KangStijn DhondtNathalie Gonzalez SanchezDirk InzéPascal Falter‐Braun

A1 Journal Article in NEW PHYTOLOGIST

Functional analysis of Arabidopsis and maize transgenic lines overexpressing the ADP-ribose/NADH pyrophosphohydrolase, AtNUDX7

Elizabeth NjugunaGriet CoussensPia NeytStijn AesaertVeronique StormeKirin DemuynckHannes VanhaerenStijn DhondtYolaine Van HaverLinus Paul et al.

A1 Journal Article in INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Histone 2B monoubiquitination complex integrates transcript elongation with RNA processing at circadian clock and flowering regulators

Magdalena WoloszynskaSabine Le GallPia NeytTommaso Matteo BoccardiMarion GrasserGernot LängstStijn AesaertGriet CoussensStijn DhondtEveline Van De Slijke et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multifaceted activity of cytokinin in leaf development shapes its size and structure in Arabidopsis

Jan SkalákLiesbeth VercruyssenHannes ClaeysJana HradilováMartin ČernýOndřej NovákLenka PlačkováIñigo Saiz-FernándezPatricie SkalákováFrederik Coppens et al.

A1 Journal Article in PLANT JOURNAL

The role of HEXOKINASE1 in Arabidopsis leaf growth

Judith Van DingenenMattias VermeerschLiesbeth De MildeSander HulsmansNancy De WinneJelle Van LeeneNathalie Gonzalez SanchezStijn DhondtGeert De JaegerFilip Rolland et al.

A1 Journal Article in PLANT MOLECULAR BIOLOGY

cis-Cinnamic acid is a natural plant growth-promoting compound

Ward SteenackersIlias El HouariAlexandra BaekelandtKlaas WitvrouwStijn DhondtOlivier LerouxNathalie Gonzalez SanchezSander CorneillieIgor CesarinoDirk Inzé et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2018

Close-range hyperspectral image analysis for the early detection of stress responses in individual plants in a high-throughput phenotyping platform

Mohd Shahrimie Mohd AsaariPuneet MishraStien MertensStijn DhondtDirk InzéNathalie WuytsPaul Scheunders

A1 Journal Article in ISPRS JOURNAL OF PHOTOGRAMMETRY AND REMOTE SENSING

Detection of plant responses to drought using close-range hyperspectral imaging in a high-throughput phenotyping platform

Mohd Shahrimie Mohd AsaariStien MertensStijn DhondtNathalie WuytsPaul Scheunders

2017

Natural variation of molecular and morphological gibberellin responses

Younjeong NamDorota HermanJonas BlommeEunyoung ChaeMikiko KojimaFrederik CoppensVeronique StormeTwiggy Van DaeleStijn DhondtHitoshi Sakakibara et al.

A1 Journal Article in PLANT PHYSIOLOGY

Robust plane-based calibration for linear cameras

Simon DonnéHiep LuongStijn DhondtNathalie WuytsDirk InzéBart GoossensWilfried Philips

Strobilurins as growth-promoting compounds : how Stroby regulates Arabidopsis leaf growth

Judith Van DingenenChrystalla AntoniouPanagiota FilippouJacob PollierNathalie Gonzalez SanchezStijn DhondtAlain GoossensVasileios FotopoulosDirk Inzé

A1 Journal Article in PLANT CELL AND ENVIRONMENT

The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis

Andrés Ritter TraubSabrina IñigoPatricia Fernandez CalvoKen HeyndrickxStijn DhondtHua ShiLiesbeth De MildeRobin Vanden BosscheRebecca De ClercqDominique Eeckhout et al.

A1 Journal Article in NATURE COMMUNICATIONS

Unlocking the potential of plant phenotyping data through integration and data-driven approaches

Frederik CoppensNathalie WuytsDirk InzéStijn Dhondt

A2 Journal Article in CURRENT OPINION IN SYSTEMS BIOLOGY

2016

3D reconstruction of maize plants in the phenoVision system

Simon DonnéHiep LuongStijn DhondtNathalie WuytsDirk InzéWilfried Philips

Chloroplasts are central players in sugar-induced leaf growth

Judith Van DingenenLiesbeth De MildeMattias VermeerschKatrien MaleuxRiet De RyckeMichiel De BruyneVeronique StormeNathalie Gonzalez SanchezStijn DhondtDirk Inzé

A1 Journal Article in PLANT PHYSIOLOGY

GPU-based maize plant analysis: accelerating CNN segmentation and voxel carving

Simon DonnéBart GoossensStijn DhondtNathalie WuytsHiep LuongDirk InzéWilfried Philips

Leaf growth response to mild drought : natural variation in Arabidopsis sheds light on trait architecture

Pieter ClauwFrederik CoppensArthur KorteDorota HermanBram SlabbinckStijn DhondtTwiggy Van DaeleLiesbeth De MildeMattias VermeerschKatrien Maleux et al.

A1 Journal Article in PLANT CELL

Machine learning for maize plant segmentation

Simon DonnéHiep LuongBart GoossensStijn DhondtNathalie WuytsDirk InzéWilfried Philips

2015

Leaf responses to mild drought stress in natural variants of Arabidopsis

Pieter ClauwFrederik CoppensKristof De BeufStijn DhondtTwiggy Van DaeleKatrien MaleuxVeronique StormeLieven ClementNathalie Gonzalez SanchezDirk Inzé

A1 Journal Article in PLANT PHYSIOLOGY

Measurement of plant growth in view of an integrative analysis of regulatory networks

Nathalie WuytsStijn DhondtDirk Inzé

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

Rotational fusion and extended field of depth for a single cell layer in DIC microscopic images

Jonas De VylderHiep LuongWilfried PhilipsStijn DhondtDirk Inzé

2014

ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development

Liesbeth VercruyssenAurine VerkestNathalie Gonzalez SanchezKen HeyndrickxDominique EeckhoutSoon-Ki HanTeddy JéguRafal ArchackiJelle Van LeeneMegan Andriankaja et al.

A1 Journal Article in PLANT CELL

High-resolution time-resolved imaging of in vitro Arabidopsis rosette growth

Stijn DhondtNathalie Gonzalez SanchezJonas BlommeLiesbeth De MildeTwiggy Van DaeleDirk Van AkoleyenVeronique StormeFrederik CoppensGerrit BeemsterDirk Inzé

A1 Journal Article in PLANT JOURNAL

Phenotyping on microscopic scale using DIC microscopy

Jonas De VylderStijn DhondtHiep LuongDirk InzéWilfried Philips

Rotation and focal depth fusion of DIC microscopic images

Jonas De VylderHiep LuongStijn DhondtMichiel VlaminckDirk InzéWilfried Philips

2013

A novel tracing method for the segmentation of cell wall networks

Jonas De VylderFilip RoomsStijn DhondtDirk InzéWilfried Philips

Brassinosteroid production and signaling differentially control cell division and expansion in the leaf

Miroslava ZhiponovaIsabelle VanhoutteVéronique BoudolfCamilla BettiStijn DhondtFrederik CoppensEvelien MylleSara MaesMary-Paz González-GarcíaAna I Caño-Delgado et al.

A1 Journal Article in NEW PHYTOLOGIST

Cell to whole-plant phenotyping: the best is yet to come

Stijn DhondtNathalie WuytsDirk Inzé

A1 Journal Article in TRENDS IN PLANT SCIENCE

ETHYLENE RESPONSE FACTOR6 acts as a central regulator of leaf growth under water-limiting conditions in Arabidopsis

Marieke DuboisAleksandra SkiryczHannes ClaeysKatrien MaleuxStijn DhondtStefanie De BodtRobin Vanden BosscheLiesbeth De MildeTakeshi YoshizumiMinami Matsui et al.

A1 Journal Article in PLANT PHYSIOLOGY

Kinematic analysis of cell division in leaves of mono- and dicotyledonous species: a basis for understanding growth and developing refined molecular sampling strategies

Hilde NelissenBart RymenFrederik CoppensStijn DhondtFabio FioraniGerrit Beemster

Bookchapter in Plant organogenesis : methods and protocols

2012

AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development

Benjamin PéretKamal SwarupAlison FergusonMalvika SethYaodong YangStijn DhondtNicholas JamesIlda CasimiroPaula PerryAdnan Syed et al.

A1 Journal Article in PLANT CELL

Arabidopsis class I and class II TCP transcription factors regulate jasmonic acid metabolism and leaf development antagonistically

Selahattin DanismanFroukje van der WalStijn DhondtRichard WaitesStefan de FolterAndrea BimboAalt-Jan van DijkJose M MuinoLucas CutriMarcelo C Dornelas et al.

A1 Journal Article in PLANT PHYSIOLOGY

Combined linkage and association mapping reveals CYCD5;1 as a quantitative trait gene for endoreduplication in Arabidopsis

Roel SterkenRaphaël KiekensJoanna BorucFanghong ZhangAnnelies VercauterenIlse VercauterenLien De SmetStijn DhondtDirk InzéLieven De Veylder et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exit from proliferation during leaf development in Arabidopsis thaliana: a not-so-gradual process

Megan AndriankajaStijn DhondtStefanie De BodtHannes VanhaerenFrederik CoppensLiesbeth De MildePer MühlenbockAleksandra SkiryczNathalie Gonzalez SanchezGerrit Beemster et al.

A1 Journal Article in DEVELOPMENTAL CELL

Identification of putative cancer genes through data integration and comparative genomics between plants and humans

Mauricio Quimbaya GomezKlaas VandepoeleEric RaspéMichiel MatthijsStijn DhondtGerrit BeemsterGeert BerxLieven De Veylder

A1 Journal Article in CELLULAR AND MOLECULAR LIFE SCIENCES

Imaging as a tool to study leaf development in Arabidopsis thaliana

Stijn DhondtDirk InzéGerrit Beemster

Quantitative analysis of venation patterns of Arabidopsis leaves by supervised image analysis

Stijn DhondtDirk Van HaerenborghCaroline Van CauwenberghRoeland MerksWilfried PhilipsGerrit BeemsterDirk Inzé

A1 Journal Article in PLANT JOURNAL

SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization

Nubia Barbosa EloyNathalie Gonzalez SanchezJelle Van LeeneKatrien MaleuxHannes VanhaerenLiesbeth De MildeStijn DhondtLeen VercruysseErwin WittersRaphaël Mercier et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2011

Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis

Steffen VannesteFrederik CoppensEunKyoung LeeTyler J. DonnerZidian XieGert Van IsterdaelStijn DhondtFreya De WinterBert De RybelMarnik Vuylsteke et al.

A1 Journal Article in EMBO JOURNAL

Model-based analysis of arabidopsis leaf epidermal cells reveals distinct division and expansion patterns for pavement and guard cells

Leila Kheibarshekan AslStijn DhondtVéronique BoudolfGerrit BeemsterTom BeeckmanDirk InzéWilly GovaertsLieven De Veylder

A1 Journal Article in PLANT PHYSIOLOGY

Survival and growth of arabidopsis plants given limited water are not equal

Aleksandra SkiryczKorneel VandenbrouckePieter ClauwKatrien MaleuxBjörn De MeyerStijn DhondtAnna PucciNathalie Gonzalez SanchezFrank HoeberichtsVanesa Tognetti et al.

A1 Journal Article in NATURE BIOTECHNOLOGY

Whole organ, venation and epidermal cell morphological variations are correlated in the leaves of Arabidopsis mutants

José Manuel Pérez-PérezSilvia Rubio-DíazStijn DhondtDiana Hernández-RomeroJoaquín Sánchez-SorianoGerrit BeemsterMaría Rosa PonceJosé Luis Micol

A1 Journal Article in PLANT CELL AND ENVIRONMENT

2010

Increased leaf size: different means to an end

Nathalie Gonzalez SanchezStefanie De BodtRonan SulpiceYusuke JikumaruEunyoung ChaeStijn DhondtTwiggy Van DaeleLiesbeth De MildeDetlef WeigelYuji Kamiya et al.

A1 Journal Article in PLANT PHYSIOLOGY

Kinematic analysis of cell division and expansion

Bart RymenFrederik CoppensStijn DhondtFabio FioraniGerrit Beemster

Bookchapter in Plant developmental biology : methods and protocols

Plant structure visualization by high-resolution X-ray computed tomography

Stijn DhondtHannes VanhaerenDenis Van LooVeerle CnuddeDirk Inzé

A1 Journal Article in TRENDS IN PLANT SCIENCE

Plant structure visualization by high-resolution X-ray computed tomography

Stijn DhondtHannes VanhaerenDenis Van LooVeerle CnuddeDirk Inzé

SHORT-ROOT and SCARECROW regulate leaf growth in Arabidopsis by stimulating S-phase progression of the cell cycle

Stijn DhondtFrederik CoppensFreya De WinterKamal SwarupRoeland MerksDirk InzéMalcolm J BennettGerrit Beemster

A1 Journal Article in PLANT PHYSIOLOGY

2009

Gibberellin signaling controls cell proliferation rate in Arabidopsis

Patrick AchardAndi GustiSolzic CheminantMalek AliouaStijn DhondtFrederik CoppensGerrit BeemsterPascal Genschik

A1 Journal Article in Current Biology