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Researcher
Kenneth Verheggen
Profile
Projects
Publications
Activities
Awards & Distinctions
14
Results
2020
Anatomy and evolution of database search engines : a central component of mass spectrometry based proteomic workflows
Kenneth Verheggen
Helge Raeder
Frode S Berven
Lennart Martens
Harald Barsnes
Marc Vaudel
A1
Journal Article
in
MASS SPECTROMETRY REVIEWS
2020
2019
LNCipedia 5 : towards a reference set of human long non-coding RNAs
Pieter-Jan Volders
Jasper Anckaert
Kenneth Verheggen
Justine Nuytens
Lennart Martens
Pieter Mestdagh
Jo Vandesompele
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2019
2018
How to till a growing field : large-scale re-analysis of public proteomics data
Kenneth Verheggen
Lennart Martens
Harald Barsnes
Dissertation
2018
SQANTI : extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
Manuel Tardaguila
Lorena de la Fuente
Cristina Marti
Cécile Pereira
Francisco Jose Pardo-Palacios
Hector del Risco
Marc Ferrell
Maravillas Mellado
Marissa Macchietto
Kenneth Verheggen
et al.
A1
Journal Article
in
GENOME RESEARCH
2018
2017
Noncoding after all : biases in proteomics data do not explain observed absence of lncRNA translation products
Kenneth Verheggen
Pieter-Jan Volders
Pieter Mestdagh
Gerben Menschaert
Petra Van Damme
Kris Gevaert
Lennart Martens
Jo Vandesompele
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2017
Unbiased protein association study on the public human proteome reveals biological connections between co-occurring protein pairs
Surya Gupta
Kenneth Verheggen
Jan Tavernier
Lennart Martens
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2017
2016
Database search engines : paradigms, challenges and solutions
Kenneth Verheggen
Lennart Martens
Frode S. Berven
Harald Barsnes
Marc Vaudel
A1
Journal Article
in
Modern proteomics : sample preparation, analysis and practical applications
2016
Exploring the potential of public proteomics data
Marc Vaudel
Kenneth Verheggen
Attila Csordas
Helge Raeder
Frode S Berven
Lennart Martens
Juan A Vizcaíno
Harald Barsnes
A1
Journal Article
in
PROTEOMICS
2016
moFF : a robust and automated approach to extract peptide ion intensities
Andrea Argentini
Ludger Goeminne
Kenneth Verheggen
Niels Hulstaert
An Staes
Lieven Clement
Lennart Martens
A1
Journal Article
in
NATURE METHODS
2016
2015
An update on LNCipedia : a database for annotated human lncRNA sequences
Pieter-Jan Volders
Kenneth Verheggen
Gerben Menschaert
Klaas Vandepoele
Lennart Martens
Jo Vandesompele
Pieter Mestdagh
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2015
Pladipus enables universal distributed computing in proteomics bioinformatics
Kenneth Verheggen
Davy Maddelein
Niels Hulstaert
Lennart Martens
Harald Barsnes
Marc Vaudel
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2015
sORFs.org : a repository of small ORFs identified by ribosome profiling
Volodimir Olexiouk
Jeroen Crappé
Steven Verbruggen
Kenneth Verheggen
Lennart Martens
Gerben Menschaert
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2015
2014
Distributed computing and data storage in proteomics: many hands make light work, and a stronger memory
Kenneth Verheggen
Harald Barsnes
Lennart Martens
A1
Journal Article
in
PROTEOMICS
2014
Toward more transparent and reproducible omics studies through a common metadata checklist and data publications
Eugene Kolker
Vural Özdemir
Lennart Martens
William Hancock
Gordon Anderson
Nathaniel Anderson
Sukru Aynacioglu
Ancha Baranova
Shawn R Campagna
Rui Chen
et al.
Editorial material
2014