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Researcher
Katleen De Preter
Profile
Projects
Publications
Activities
304
Results
2023
Cell-Free DNA as a Diagnostic and Prognostic Biomarker in Pediatric Rhabdomyosarcoma
Ruben Van Paemel
Charlotte Vandeputte
Katleen De Preter
Bram De Wilde
U
Journal Article
in
JCO Precision Oncology
2023
2022
Complementarity of single-nucleus and single-cell RNA sequencing to study the transcriptional heterogeneity of neuroblastoma tumors
Noah Bonine
Tinne Thoné
Bavo Vanneste
Liselot Mus
Celine Everaert
Bram De Wilde
Franki Speleman
Charlotte Scott
Katleen De Preter
C3
Conference
2022
Complementarity of single-nucleus and single-cell RNA sequencing to study the transcriptional heterogeneity of neuroblastoma tumors
Noah Bonine
Tinne Thoné
Bavo Vanneste
Liselot Mus
Celine Everaert
Bram De Wilde
Franki Speleman
Charlotte Scott
Katleen De Preter
C3
Conference
2022
Comprehensive RNA dataset of tissue and plasma from patients with esophageal cancer or precursor lesions
Kathleen Schoofs
Annouck Philippron
Francisco Avila Cobos
Steve Lefever
Jasper Anckaert
Danny De Looze
Jo Vandesompele
Piet Pattyn
Katleen De Preter
A1
Journal Article
in
SCIENTIFIC DATA
2022
Digital PCR-based evaluation of nucleic acid extraction kit performance for the co-purification of cell-free DNA and RNA
Jill Deleu
Kathleen Schoofs
Anneleen Decock
Kimberly Verniers
Sofie Roelandt
Angie Denolf
Joke Verreth
Bram De Wilde
Tom Van Maerken
Katleen De Preter
Jo Vandesompele
A1
Journal Article
in
HUMAN GENOMICS
2022
Opportunities and challenges in interpretable deep learning for drug sensitivity prediction of cancer cells
Bikash Ranjan Samal
Jens Uwe Loers
Vanessa Vermeirssen
Katleen De Preter
A2
Journal Article
in
FRONTIERS IN BIOINFORMATICS
2022
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
Jasper Anckaert
Francisco Avila Cobos
Anneleen Decock
Jill Deleu
Olivier De Wever
Jilke De Wilde
Bert Dhondt
Thibaut D'huyvetter
Celine Everaert
Hetty Helsmoortel
An Hendrix
Eva Hulstaert
Pieter Mestdagh
Annelien Morlion
Nele Nijs
Justine Nuytens
Annouck Philippron
Kathleen Schoofs
Eveline Vanden Eynde
Jo Vandesompele
Tom Van Maerken
Ruben Van Paemel
Kimberly Verniers
Nurten Yigit
Franco Alexander Poma Soto
Jasper Verwilt
Philippe Decruyenaere
Olivier Thas
Katleen De Preter
Preprint
2022
RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition
Carolina de Carvalho Nunes
Lisa Depestel
Liselot Mus
Louis Delhaye
Amber Louwagie
Muhammad Rishfi
Fanny De Vloed
Ellen Sanders
Aline Eggermont
Sarah-Lee Bekaert
Wouter Van Loocke
Jan Willem Bek
Givani Dewyn
Siebe Loontiens
Gert Van Isterdael
Bieke Decaesteker
Laurentijn Tilleman
Filip Van Nieuwerburgh
Vanessa Vermeirssen
Christophe Van Neste
Bart Ghesquière
Steven Goossens
Sven Eyckerman
Katleen De Preter
Bram De Wilde
Kaat Durinck
Franki Speleman
A1
Journal Article
in
SCIENCE ADVANCES
2022
The feasibility of using liquid biopsies as a complementary assay for copy number aberration profiling in routinely collected paediatric cancer patient samples
Ruben Van Paemel
Charlotte Vandeputte
Lennart Raman
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Andries De Koker
Björn Menten
Genevieve Laureys
Franki Speleman
Bram De Wilde
Tim Lammens
Katleen De Preter
Nadine Van Roy
A1
Journal Article
in
EUROPEAN JOURNAL OF CANCER
2022
When DNA gets in the way in RNA-seq experiments, a sequel
Jasper Verwilt
Wim Trypsteen
Ruben Van Paemel
Katleen De Preter
Pieter Mestdagh
Jo Vandesompele
Preprint
2022
2021
Evaluation of a marker independent isolation method for circulating tumor cells in esophageal adenocarcinoma
Annouck Philippron
Bram De Laere
Charlotte Vandeputte
Katleen De Preter
Piet Pattyn
A1
Journal Article
in
PLOS ONE
2021
Expanding the diagnostic toolbox in pediatric oncology : exploration of the value of the cell-free DNA methylome
Ruben Van Paemel
Bram De Wilde
Katleen De Preter
Dissertation
2021
Frequency and prognostic impact of ALK amplifications and mutations in the European Neuroblastoma Study Group (SIOPEN) high-risk neuroblastoma trial (HR-NBL1)
Katleen De Preter
Nadine Van Roy
A1
Journal Article
in
JOURNAL OF CLINICAL ONCOLOGY
2021
From DNA copy number gains and tumor dependencies to novel therapeutic targets for high-risk neuroblastoma
Bieke Decaesteker
Kaat Durinck
Nadine Van Roy
Bram De Wilde
Christophe Van Neste
Stéphane Van Haver
Katleen De Preter
Vanessa Vermeirssen
Franki Speleman
A1
Journal Article
in
JOURNAL OF PERSONALIZED MEDICINE
2021
Genome-wide study of the effect of blood collection tubes on the cell-free DNA methylome
Ruben Van Paemel
Andries De Koker
Annelien Morlion
Pieter Mestdagh
Bram De Wilde
Jo Vandesompele
Katleen De Preter
A1
Journal Article
in
EPIGENETICS
2021
MEIS2 is an adrenergic core regulatory transcription factor involved in early initiation of TH-MYCN-driven neuroblastoma formation
Jolien De Wyn
Carolina de Carvalho Nunes
Anneleen Beckers
Pieter-Jan Volders
Bieke Decaesteker
Katleen De Preter
Wouter Van Loocke
Franki Speleman
Kaat Durinck
A1
Journal Article
in
CANCERS
2021
Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
Ruben Van Paemel
Andries De Koker
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Jo Vandesompele
Nadine Van Roy
Nico Callewaert
Katleen De Preter
Bram De Wilde
A1
Journal Article
in
EPIGENETICS
2021
Recurrent chromosomal imbalances provide selective advantage to human embryonic stem cells under enhanced replicative stress conditions
Liselot Mus
Stéphane Van Haver
Mina Popovic
Wim Trypsteen
Steve Lefever
Eva Jacobs
Ellen Sanders
Christophe Van Neste
Suzanne Vanhauwaert
Bieke Decaesteker
Dieter Deforce
Filip Van Nieuwerburgh
Pieter Mestdagh
Jo Vandesompele
Björn Menten
Katleen De Preter
Björn Heindryckx
Kaat Durinck
Franki Speleman
A1
Journal Article
in
GENES CHROMOSOMES & CANCER
2021
SOX11 as guardian of epigenetic plasticity in neuroblastoma
Bieke Decaesteker
Amber Louwagie
Siebe Loontiens
Carolina de Carvalho Nunes
Fanny De Vloed
Lisa Depestel
Juliette Roels
Karen Verboom
Eva D'haene
Wouter Van Loocke
Volodimir Olexiouk
Pauline Depuydt
Ellen Sanders
Givani Dewyn
Liselot Mus
Lucia Lorenzi
Jo Van Dorpe
David Creytens
Kaat Durinck
Björn Menten
Nadine Van Roy
Tim Pieters
Pieter Van Vlierberghe
Suzanne Vanhauwaert
Christophe Van Neste
Katleen De Preter
Franki Speleman
C3
Conference
2021
The RNA Atlas expands the catalog of human non-coding RNAs
Lucia Lorenzi
Francisco Avila Cobos
Pieter-Jan Volders
Robrecht Cannoodt
Justine Nuytens
Katrien Vanderheyden
Jasper Anckaert
Steve Lefever
Wim Trypsteen
Fien Gysens
Marieke Vromman
Tine Goovaerts
Nele Nijs
Tom Taghon
Karim Vermaelen
Ken Bracke
Yvan Saeys
Tim De Meyer
Katleen De Preter
Jo Vandesompele
Pieter Mestdagh
A1
Journal Article
in
NATURE BIOTECHNOLOGY
2021
The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)
Francisco Avila Cobos
Pieter-Jan Volders
Robrecht Cannoodt
Justine Nuytens
Jasper Anckaert
Steve Lefever
Wim Trypsteen
Fien Gysens
Marieke Vromman
Tom Taghon
Karim Vermaelen
Ken Bracke
Yvan Saeys
Tim De Meyer
Katleen De Preter
Jo Vandesompele
Pieter Mestdagh
Correction
2021
The functional annotation and exploration the SOX11 enhanceosome
Amber Louwagie
Bieke Decaesteker
Louis Delhaye
Eva D'haene
Eric de Bony de Lavergne
Volodimir Olexiouk
Sarah Vergult
Sven Eyckerman
Pieter Mestdagh
Katleen De Preter
Franki Speleman
C3
Conference
2021
2020
Addressing challenges in transcriptome annotation and cell-type heterogeneity through integration of omics datasets and computational deconvolution
Francisco Avila Cobos
Katleen De Preter
Pieter Mestdagh
Dissertation
2020
Benchmarking of cell type deconvolution pipelines for transcriptomics data
Francisco Avila Cobos
Pieter Mestdagh
Katleen De Preter
A1
Journal Article
in
NATURE COMMUNICATIONS
2020
Distinct Notch1 and BCL11B requirements mediate human γδ/αβ T cell development
Anne-Catherine Dolens
Kaat Durinck
Marieke Lavaert
Joni Van der Meulen
Imke Velghe
Jelle De Medts
Karin Weening
Juliette Roels
Katrien De Mulder
Pieter-Jan Volders
Katleen De Preter
Tessa Kerre
Bart Vandekerckhove
Georges Leclercq
Jo Vandesompele
Pieter Mestdagh
Pieter Van Vlierberghe
Franki Speleman
Tom Taghon
A1
Journal Article
in
EMBO REPORTS
2020
Inferring the genomic landscape of lymph-node positive high-risk prostate cancer
Jan Vanwelkenhuyzen
Kim Van der Eecken
Bram De Laere
Katleen De Preter
Piet Ost
C3
Conference
2020
Long noncoding RNA SILC1 is an upstream regulator of SOX11 in neuroblastoma
Amber Louwagie
Bieke Decaesteker
Eva D'haene
Louis Delhaye
Eric de Bony de Lavergne
Christophe Van Neste
Björn Menten
Sven Eyckerman
Pieter Mestdagh
Katleen De Preter
Franki Speleman
C3
Conference
2020
Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA
Ruben Van Paemel
Andries De Koker
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Jo Vandesompele
Nadine Van Roy
Nico Callewaert
Bram De Wilde
Katleen De Preter
C3
Conference
2020
SOX11 as guardian of epigenetic plasticity in neuroblastoma
Bieke Decaesteker
Amber Louwagie
Siebe Loontiens
Carolina de Carvalho Nunes
Karen Verboom
Juliette Roels
Eva D'haene
Kaat Durinck
Suzanne Vanhauwaert
Christophe Van Neste
Katleen De Preter
Franki Speleman
C3
Conference
2020
The ETS transcription factor ETV5 is a target of activated ALK in neuroblastoma contributing to increased tumour aggressiveness
Liselot Mus
Irina Lambertz
Shana Claeys
Candy Kumps
Wouter Van Loocke
Christophe Van Neste
Genevieve Laureys
Olivier De Wever
Bram De Wilde
Kaat Durinck
Katleen De Preter
Franki Speleman
A1
Journal Article
in
SCIENTIFIC REPORTS
2020
The pitfalls and promise of liquid biopsies for diagnosing and treating solid tumors in children : a review
Ruben Van Paemel
Katleen De Preter
Nadine Van Roy
Franki Speleman
Leen Willems
Tim Lammens
Genevieve Laureys
Bram De Wilde
A1
Journal Article
in
EUROPEAN JOURNAL OF PEDIATRICS
2020
When DNA gets in the way : a cautionary note for DNA contamination in extracellular RNA-seq studies
Jasper Verwilt
Wim Trypsteen
Ruben Van Paemel
Katleen De Preter
Pieter Mestdagh
Jo Vandesompele
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2020
2019
17q gain provides proliferative advantage to human embryonic stem cells under conditions of replicative stress
Liselot Mus
Stéphane Van Haver
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2019
17q gain provides proliferative advantage to human embryonic stem cells under replicative stress
Liselot Mus
Stéphane Van Haver
Geertrui Denecker
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Vanessa Vermeirssen
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2019
A fast, affordable and minimally-invasive diagnostic test for Cancer of Unknown Primary (CUP) using DNA methylation profiling
Jilke De Wilde
Ruben Van Paemel
Charlotte Vandeputte
Andries De Koker
Joni Van der Meulen
Malaïka Van der Linden
Nico Callewaert
Jo Van Dorpe
David Creytens
Bram De Wilde
Katleen De Preter
C3
Conference
2019
A versatile method for circulating cell-free DNA methylome profiling by reduced representation bisulfite sequencing
Andries De Koker
Ruben Van Paemel
Bram De Wilde
Katleen De Preter
Nico Callewaert
Preprint
2019
ALK positively regulates MYCN activity through repression of HBP1 expression
Shana Claeys
Kaat Durinck
Bieke Decaesteker
Liselot Mus
Siebe Loontiens
Suzanne Vanhauwaert
Candy Kumps
Tom Van Maerken
Genevieve Laureys
Christophe Van Neste
Bram De Wilde
Olivier De Wever
Katleen De Preter
Franki Speleman
A1
Journal Article
in
ONCOGENE
2019
Benchmarking the impact of data transformation, pre-processing and choice of method in the computational deconvolution of transcriptomics data
Francisco Avila Cobos
Jo Vandesompele
Pieter Mestdagh
Katleen De Preter
C3
Conference
2019
Core regulatory circuitries and epigenetic plasticity in neuroblastoma
Bieke Decaesteker
Katleen De Preter
Franki Speleman
Dissertation
2019
DREAM target reactivation by core transcriptional regulators supports neuroblastoma growth
Bieke Decaesteker
Katleen De Preter
Franki Speleman
A2
Journal Article
in
MOLECULAR & CELLULAR ONCOLOGY
2019
Exploring the contribution of gene dosage effects of 17q gain genes on hESC and neuroblastoma proliferation
Liselot Mus
Stéphane Van Haver
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2019
Faster, cheaper and more accurate diagnosis of cancer of unknown primary (CUP) by using methylation profiling.
Jilke De Wilde
Ruben Van Paemel
Charlotte Vandeputte
Andries De Koker
Joni Van der Meulen
Malaïka Van der Linden
Nico Callewaert
Jo Van Dorpe
David Creytens
Bram De Wilde
Katleen De Preter
C3
Conference
2019
Genetic alterations of ALK in high-risk neuroblastoma patients : a SIOPEN study
Katleen De Preter
C3
Conference
2019
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes
Dries Rombaut
Bieke Decaesteker
Celine Everaert
Nurten Yigit
Katleen De Preter
Franki Speleman
Jo Vandesompele
Steve Lefever
Pieter Mestdagh
A1
Journal Article
in
SCIENTIFIC REPORTS
2019
Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
Ruben Van Paemel
Andries De Koker
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Jo Vandesompele
Nadine Van Roy
Nico Callewaert
Katleen De Preter
Bram De Wilde
Preprint
2019
Modelling single-cell dynamics with trajectories and gene regulatory networks
Robrecht Cannoodt
Yvan Saeys
Katleen De Preter
Dissertation
2019
Non-invasive classification of pediatric tumor types using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
Ruben Van Paemel
Charlotte Vandeputte
Tim Lammens
Jo Vandesompele
Nadine Van Roy
Katleen De Preter
Bram De Wilde
C3
Conference
2019
RNA-based liquid biopsies for better clinical management of Barrett’s esophagus and esophageal adenocarcinoma
Kathleen Schoofs
Annouck Philippron
Piet Pattyn
Jo Vandesompele
Katleen De Preter
C3
Conference
2019
SOX11 as mediator of the adrenergic cell state in NB
Bieke Decaesteker
Amber Louwagie
Sara De Brouwer
Volodimir Olexiouk
Geertrui Denecker
Carolina de Carvalho Nunes
Karen Verboom
Wouter Van Loocke
Pauline Depuydt
Fanny De Vloed
Ellen Sanders
Suzanne Vanhauwaert
Liselot Mus
Siebe Loontiens
Bram De Wilde
Genevieve Laureys
Björn Menten
Nadine Van Roy
Jo Van Dorpe
David Creytens
Christophe Van Neste
Kaat Durinck
Katleen De Preter
Franki Speleman
C3
Conference
2019
SOX11 is a key epigenetic regulator in the adrenergic MYCN amplified neuroblastoma
Amber Louwagie
Bieke Decaesteker
Sara De Brouwer
Geertrui Denecker
Carolina de Carvalho Nunes
Volodimir Olexiouk
Karen Verboom
Wouter Van Loocke
Pauline Depuydt
Fanny De Vloed
Ellen Sanders
Suzanne Vanhauwaert
Liselot Mus
Siebe Loontiens
Björn Menten
Nadine Van Roy
David Creytens
Kaat Durinck
Katleen De Preter
Franki Speleman
C3
Conference
2019
SOX11 is a key epigenetic regulator in the adrenergic MYCN amplified neuroblastoma
Amber Louwagie
Bieke Decaesteker
Carolina de Carvalho Nunes
Geertrui Denecker
Volodimir Olexiouk
Karen Verboom
Wouter Van Loocke
Pauline Depuydt
Fanny De Vloed
Ellen Sanders
Liselot Mus
Siebe Loontiens
Lucia Lorenzi
Jo Van Dorpe
David Creytens
Björn Menten
Nadine Van Roy
Kaat Durinck
Suzanne Vanhauwaert
Christophe Van Neste
Katleen De Preter
Franki Speleman
C3
Conference
2019
Searching for liquid RNA biomarkers for esophageal adenocarcinoma
Kathleen Schoofs
Annouck Philippron
Piet Pattyn
Jo Vandesompele
Katleen De Preter
C3
Conference
2019
Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
Charlotte Vandeputte
Ruben Van Paemel
Andries De Koker
Leen Willems
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Bram De Wilde
Franki Speleman
Katleen De Preter
Tim Lammens
Nadine Van Roy
C3
Conference
2019
Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
Charlotte Vandeputte
Ruben Van Paemel
Andries De Koker
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Bram De Wilde
Franki Speleman
Katleen De Preter
Nadine Van Roy
Tim Lammens
C3
Conference
2019
Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
Charlotte Vandeputte
Ruben Van Paemel
Andries De Koker
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Bram De Wilde
Franki Speleman
Katleen De Preter
Nadine Van Roy
Tim Lammens
C3
Conference
2019
Successful copy number alteration profiling using circulating cell-free tumor DNA as a non-invasive alternative for tissue biopsies in pediatric cancer patients
Charlotte Vandeputte
Ruben Van Paemel
Andries De Koker
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Bram De Wilde
Franki Speleman
Katleen De Preter
Nadine Van Roy
Tim Lammens
C3
Conference
2019
The RNA Atlas, a single nucleotide resolution map of the human transcriptome
Lucia Lorenzi
Francisco Avila Cobos
Pieter-Jan Volders
Robrecht Cannoodt
Justine Nuytens
Jasper Anckaert
Steve Lefever
Tine Goovaerts
Tom Taghon
Karim Vermaelen
Ken Bracke
Tim De Meyer
Katleen De Preter
Jo Vandesompele
Pieter Mestdagh
Preprint
2019
2018
Assessing the biological signal of different RNA fractions for computational deconvolution of healthy tissues
Francisco Avila Cobos
Lucia Lorenzi
Jo Vandesompele
Katleen De Preter
Pieter Mestdagh
C3
Conference
2018
Biallelic and monoallelic ESR2 variants associated with 46,XY disorders of sex development
Dorien Baetens
Lode De Cauwer
Frank Peelman
Hannah Verdin
Marnik Vuylsteke
Malaïka Van der Linden
Karolien De Bosscher
Martine Cools
Elfride De Baere
Katleen De Preter
A1
Journal Article
in
GENETICS IN MEDICINE
2018
Circulating microRNA biomarkers for metastatic disease in neuroblastoma patients
Fjoralba Zeka
Anneleen Decock
Alan Van Goethem
Katrien Vanderheyden
Tim Lammens
Hetty Helsmoortel
Genevieve Laureys
Tom Van Maerken
Franki Speleman
Katleen De Preter
Pieter Mestdagh
Jo Vandesompele
A1
Journal Article
in
JCI INSIGHT
2018
Circulating microRNA biomarkers for metastatic neuroblastoma
Fjoralba Zeka
Alan Van Goethem
Tim Lammens
Anneleen Decock
Hetty Helsmoortel
Genevieve Laureys
Franki Speleman
Tom Van Maerken
Katleen De Preter
Pieter Mestdagh
Jo Vandesompele
C3
Conference
2018
Computational deconvolution of transcriptomics data from mixed cell populations
Francisco Avila Cobos
Jo Vandesompele
Pieter Mestdagh
Katleen De Preter
A1
Journal Article
in
BIOINFORMATICS
2018
Cross-cohort analysis identifies a TEAD4-MYCN positive-feedback loop as the core regulatory element of high-risk neuroblastoma
Katleen De Preter
Jo Vandesompele
Pieter Mestdagh
A1
Journal Article
in
CANCER DISCOVERY
2018
DNA copy number imbalances with clinical relevance in cancer : rare events in big data
Pauline Depuydt
Katleen De Preter
Franki Speleman
Dissertation
2018
Data Descriptor: Meta-mining of copy number profiles of high-risk neuroblastoma tumors
Pauline Depuydt
Franki Speleman
Katleen De Preter
A1
Journal Article
in
SCIENTIFIC DATA
2018
Exploring the contribution of gene dosage effects of 17Q gain on ESC and neuroblastoma proliferation
Liselot Mus
Geertrui Denecker
Stéphane Van Haver
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2018
Exploring the contribution of gene dosage effects of 17q gain genes on hESC and neuroblastoma proliferation
Liselot Mus
Stéphane Van Haver
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2018
Exploring the contribution of gene dosage effects of 17q gain on ESC and neuroblastoma proliferation
Liselot Mus
Geertrui Denecker
Stéphane Van Haver
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2018
Exploring the contribution of gene dosage effects of 17q gain on ESC and neuroblastoma proliferation
Liselot Mus
Geertrui Denecker
Stéphane Van Haver
Ellen Sanders
Eva Jacobs
Mina Popovic
Christophe Van Neste
Suzanne Vanhauwaert
Kaat Durinck
Björn Menten
Katleen De Preter
Björn Heindryckx
Franki Speleman
C3
Conference
2018
Genomic amplifications and distal 6q loss : novel markers for poor survival in high-risk neuroblastoma patients
Pauline Depuydt
Robrecht Cannoodt
Genevieve Laureys
Franki Speleman
Katleen De Preter
A1
Journal Article
in
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE
2018
Identification of novel drug targets downstream of activated ALK in neuroblastoma
Shana Claeys
Franki Speleman
Katleen De Preter
Dissertation
2018
In silico discovery of a FOXM1 driven embryonal signaling pathway in therapy resistant neuroblastoma tumors
Suzanne Vanhauwaert
Bieke Decaesteker
Sara De Brouwer
Carina Leonelli
Kaat Durinck
Pieter Mestdagh
Jo Vandesompele
Geertrui Denecker
Christophe Van Neste
Franki Speleman
Katleen De Preter
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
IncGraph : incremental graphlet counting for topology optimisation
Robrecht Cannoodt
Joeri Ruyssinck
Jana Ramon
Katleen De Preter
Yvan Saeys
A1
Journal Article
in
PLOS ONE
2018
Integrated proximal proteomics reveals IRS2 as a determinant of cell survival in ALK-driven neuroblastoma
Shana Claeys
Katleen De Preter
Franki Speleman
A1
Journal Article
in
SCIENCE SIGNALING
2018
LDHA in neuroblastoma is associated with poor outcome and its depletion decreases neuroblastoma growth independent of aerobic glycolysis
Katleen De Preter
Franki Speleman
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2018
LDHA predicts poor survival in neuroblastoma and its depletion causes aerobic glycolysis-independent inhibition of neuroblastoma cells
Katleen De Preter
Franki Speleman
C3
Conference
2018
Mapping the genomic landscape of inherited retinal disease genes prioritizes genes prone to coding and noncoding copy-number variations
Kristof Van Schil
Sarah Naessens
Stijn Van de Sompele
Marjolein Carron
Caroline Van Cauwenbergh
Mattias Van Heetvelde
Miriam Bauwens
Hannah Verdin
Frauke Coppieters
Katleen De Preter
Bart Leroy
Elfride De Baere
A1
Journal Article
in
GENETICS IN MEDICINE
2018
Network modeling of microRNA-mRNA interactions in neuroblastoma tumorigenesis identifies miR-204 as a direct inhibitor of MYCN
Anneleen Beckers
Sara De Brouwer
Bieke Decaesteker
Katleen De Preter
Franki Speleman
A1
Journal Article
in
CANCER RESEARCH
2018
Non-invasive differential diagnosis of neuroblastoma with other paediatric solid tumors using methylation profiling of circulating cell-free DNA
Ruben Van Paemel
Anneleen Decock
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Franki Speleman
Wim Van Criekinge
Nadine Van Roy
Jo Vandesompele
Katleen De Preter
Bram De Wilde
C3
Conference
2018
Non-invasive differential diagnosis of neuroblastoma with other paediatric solid tumors using methylation profiling of circulating cell-free DNA
Ruben Van Paemel
Anneleen Decock
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Franki Speleman
Wim Van Criekinge
Nadine Van Roy
Jo Vandesompele
Katleen De Preter
Bram De Wilde
C3
Conference
2018
Non-invasive differential diagnosis of neuroblastoma with other paediatric solid tumors using methylation profiling of circulating cell-free DNA
Ruben Van Paemel
Anneleen Decock
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Franki Speleman
Wim Van Criekinge
Nadine Van Roy
Jo Vandesompele
Katleen De Preter
Bram De Wilde
C3
Conference
2018
Promoter-associated proteins of EPAS1 identified by enChIP-MS : a putative role of HDX as a negative regulator
Katleen De Preter
Franki Speleman
A1
Journal Article
in
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
2018
SOX11 is a transcriptional circuit dosage sensitive transcription factor controlling SWI/SNF components
Bieke Decaesteker
Sara De Brouwer
Geertrui Denecker
Fanny De Vloed
Wouter Van Loocke
Suzanne Vanhauwaert
Pauline Depuydt
Jolien De Wyn
Björn Menten
David Creytens
Jo Van Dorpe
Franki Speleman
Katleen De Preter
C3
Conference
2018
Shallow whole genome sequencing allows successful copy number profiling in formalin-fixed paraffin-embedded material in neuroblastoma patients
Charlotte Vandeputte
Ruben Van Paemel
Bram De Wilde
Malaïka Van der Linden
Jo Van Dorpe
Björn Menten
Franki Speleman
Nadine Van Roy
Katleen De Preter
C3
Conference
2018
TBX2 is a neuroblastoma core regulatory circuitry component enhancing MYCN/FOXM1 reactivation of DREAM targets
Bieke Decaesteker
Geertrui Denecker
Christophe Van Neste
Wouter Van Loocke
Carolina de Carvalho Nunes
Fanny De Vloed
Pauline Depuydt
Karen Verboom
Dries Rombaut
Siebe Loontiens
Jolien De Wyn
Kaat Durinck
Dieter Deforce
Filip Van Nieuwerburgh
Pieter Mestdagh
Suzanne Vanhauwaert
Katleen De Preter
Franki Speleman
A1
Journal Article
in
NATURE COMMUNICATIONS
2018
TBX2 is implicated in cell cycle control and proliferation in neuroblastoma
Bieke Decaesteker
Geertrui Denecker
Christophe Van Neste
Fanny De Vloed
Pauline Depuydt
Wouter Van Loocke
Shana Claeys
Dries Rombaut
Siebe Loontiens
Suzanne Vanhauwaert
Katleen De Preter
Franki Speleman
C3
Conference
2018
The core regulatory circuit component TBX2 is implicated in cell cycle control and proliferation in neuroblastoma
Bieke Decaesteker
Geertrui Denecker
Christophe Van Neste
Fanny De Vloed
Pauline Depuydt
Wouter Van Loocke
Shana Claeys
Dries Rombaut
Siebe Loontiens
Suzanne Vanhauwaert
Katleen De Preter
Franki Speleman
C3
Conference
2018
The core regulatory circuit component TBX2 is implicated in cell cycle control and proliferation in neuroblastoma
Bieke Decaesteker
Geertrui Denecker
Pauline Depuydt
Fanny De Vloed
Shana Claeys
Dries Rombaut
Siebe Loontiens
Suzanne Vanhauwaert
Christophe Van Neste
Katleen De Preter
Franki Speleman
C3
Conference
2018
The extracellular RNA quality control (exRNAQC) study : controlling pre-analytical variables of RNA sequencing in blood-based precision medicine
Francisco Avila Cobos
Anneleen Decock
Katleen De Preter
Olivier De Wever
Bram De Wilde
Bert Dhondt
Celine Everaert
Hetty Helsmoortel
An Hendrix
Eva Hulstaert
Pieter Mestdagh
Nele Nijs
Annouck Philippron
Jo Vandesompele
Ruben Van Paemel
Kimberly Verniers
Nurten Yigit
C3
Conference
2018
The extracellular RNA quality control (exRNAQC) study: controlling pre-analytical variables of RNA sequencing in blood-based precision medicine
Francisco Avila Cobos
Anneleen Decock
Katleen De Preter
Bert Dhondt
Olivier De Wever
Bram De Wilde
Celine Everaert
Hetty Helsmoortel
An Hendrix
Eva Hulstaert
Pieter Mestdagh
Nele Nijs
Annouck Philippron
Jo Vandesompele
Ruben Van Paemel
Kimberly Verniers
Nurten Yigit
U
Conference
2018
The mutational landscape of MYCN, Lin28b and ALKF1174L driven murine neuroblastoma mimics human disease
Bram De Wilde
Anneleen Beckers
Katleen De Preter
Pauline Depuydt
Pieter Mestdagh
Tom Sante
Steve Lefever
Elien Vandermarliere
Lennart Martens
Björn Menten
Jo Vandesompele
Franki Speleman
A2
Journal Article
in
ONCOTARGET
2018
The potential of methylome sequencing in the diagnostic work : up of pediatric solid tumors
Ruben Van Paemel
Charlotte Vandeputte
Bram De Wilde
Katleen De Preter
Nadine Van Roy
Jo Vandesompele
Tim Lammens
Wim Van Criekinge
Nico Callewaert
Anneleen Decock
C3
Conference
2018
Zipper plot : visualizing transcriptional activity of genomic regions
Francisco Avila Cobos
Pieter-Jan Volders
Celine Everaert
Dries Rombaut
Jo Vandesompele
Katleen De Preter
Pieter Mestdagh
C3
Conference
2018
2017
Accelerating drug development for neuroblastoma - New drug development strategy : an Innovative Therapies for Children with Cancer, European Network for Cancer Research in Children and Adolescents and International Society of Paediatric Oncology Europe Neuroblastoma project
Katleen De Preter
Tom Van Maerken
A1
Journal Article
in
EXPERT OPINION ON DRUG DISCOVERY
2017
BRD3 as a specific vulnerable therapeutic target in neuroblastoma
Jolien De Wyn
Kaat Durinck
Siebe Loontiens
Suzanne Vanhauwaert
Katleen De Preter
Franki Speleman
C3
Conference
2017
Early and late effects of pharmacological ALK inhibition on the neuroblastoma transcriptome
Shana Claeys
Geertrui Denecker
Robrecht Cannoodt
Candy Kumps
Kaat Durinck
Franki Speleman
Katleen De Preter
A1
Journal Article
in
ONCOTARGET
2017
Genomic amplifications and distal 6q loss are novel markers for poor survival in high-risk neuroblastoma patients
Pauline Depuydt
Robrecht Cannoodt
Genevieve Laureys
Franki Speleman
Katleen De Preter
C3
Conference
2017
HBP1 is a negative epigenetic regulator of MYCN-driven neuroblastoma through interaction with the PRC2 complex
Shana Claeys
Geertrui Denecker
Irina Lambertz
Els Janssens
Suzanne Vanhauwaert
Bieke Decaesteker
Tom Van Maerken
Bram De Wilde
Genevieve Laureys
Katleen De Preter
Franki Speleman
C3
Conference
2017
Identification of novel, rare markers for poor survival in high-risk neuroblastoma patients by merging and reanalysing existing datasets
Pauline Depuydt
Robrecht Cannoodt
Genevieve Laureys
Franki Speleman
Katleen De Preter
C3
Conference
2017
Mapping the genomic landscape of inherited retinal disease genes prioritizes genes prone to coding and noncoding copy-number variations
Kristof Van Schil
Sarah Naessens
Stijn Van de Sompele
Marjolein Carron
Caroline Van Cauwenbergh
Mattias Van Heetvelde
Miriam Bauwens
Hannah Verdin
Frauke Coppieters
Katleen De Preter
Bart Leroy
Elfride De Baere
C3
Conference
2017
Mapping the genomic landscape of inherited retinal disease genes prioritizes genes prone to coding and noncoding copy-number variations
Kristof Van Schil
Sarah Naessens
Stijn Van de Sompele
Marjolein Carron
Caroline Van Cauwenbergh
Mattias Van Heetvelde
Miriam Bauwens
Hannah Verdin
Frauke Coppieters
Katleen De Preter
Bart Leroy
Elfride De Baere
C3
Conference
2017
Optimizing a workflow for transcriptome analysis of CTCs isolated from venous blood
Charlotte Vandeputte
Annouck Philippron
Nadine Van Roy
Piet Pattyn
Katleen De Preter
C3
Conference
2017
Optimizing a workflow for transcriptome analysis of CTCs isolated from venous blood
Annouck Philippron
Charlotte Vandeputte
Nadine Van Roy
Piet Pattyn
Katleen De Preter
C3
Conference
2017
RRM2 is an essential and druggable component of the FOXM1 driven replicative stress DNA damage response in neuroblastoma
Carolina de Carvalho Nunes
Siebe Loontiens
Pauline Depuydt
Suzanne Vanhauwaert
Bieke Decaesteker
Bram De Wilde
Katleen De Preter
Geertrui Denecker
Christophe Van Neste
Kaat Durinck
Franki Speleman
C3
Conference
2017
RRM2 is an essential and druggable component of the FOXM1 driven replicative stress DNA damage response in neuroblastoma
Carolina de Carvalho Nunes
Siebe Loontiens
Pauline Depuydt
Suzanne Vanhauwaert
Bieke Decaesteker
Bram De Wilde
Katleen De Preter
Geertrui Denecker
Christophe Van Neste
Kaat Durinck
Franki Speleman
C3
Conference
2017
SOX11 acts as part of the MYCN-WEE1 regulatory protein complex implicated in neuroblastoma
Bieke Decaesteker
Sara De Brouwer
Fanny De Vloed
Geertrui Denecker
Suzanne Vanhauwaert
Jolien De Wyn
Genevieve Laureys
Björn Menten
Pauline Depuydt
Kris Gevaert
Franki Speleman
Katleen De Preter
C3
Conference
2017
SOX11 acts as part of the MYCN-WEE1 regulatory protein complex implicated in neuroblastoma
Bieke Decaesteker
Sara De Brouwer
Fanny De Vloed
Suzanne Vanhauwaert
Jolien De Wyn
Genevieve Laureys
Björn Menten
Pauline Depuydt
Kris Gevaert
Franki Speleman
Katleen De Preter
C3
Conference
2017
Shallow whole genome sequencing on circulating cell-free DNA allows reliable non-invasive copy number profiling in neuroblastoma patients
Nadine Van Roy
Malaïka Van der Linden
Pauline Depuydt
Björn Menten
Annelies Dheedene
Charlotte Vandeputte
Jo Van Dorpe
Genevieve Laureys
Marjolijn Renard
Tom Sante
Tim Lammens
Bram De Wilde
Franki Speleman
Katleen De Preter
C3
Conference
2017
Shallow whole genome sequencing on circulating cell-free DNA allows reliable noninvasive copy-number profiling in neuroblastoma patients
Nadine Van Roy
Malaïka Van der Linden
Björn Menten
Annelies Dheedene
Charlotte Vandeputte
Jo Van Dorpe
Genevieve Laureys
Tom Sante
Tim Lammens
Bram De Wilde
Franki Speleman
Katleen De Preter
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2017
Targeting tachykinin receptors in neuroblastoma
Anneleen Beckers
Franki Speleman
Katleen De Preter
A1
Journal Article
in
ONCOTARGET
2017
The ETV5 oncogene is a target of activated ALK signaling in neuroblastoma
Liselot Mus
Irina Lambertz
Candy Kumps
Shana Claeys
Geertrui Denecker
Wouter Van Loocke
Christophe Van Neste
Nadine Van Roy
Bram De Wilde
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2017
The ETV5 oncogene is a target of activated ALK signaling in neuroblastoma
Liselot Mus
Irina Lambertz
Candy Kumps
Shana Claeys
Geertrui Denecker
Wouter Van Loocke
Christophe Van Neste
Nadine Van Roy
Bram De Wilde
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2017
The ETV5 oncogene is a target of activated ALK signaling in neuroblastoma
Liselot Mus
Irina Lambertz
Candy Kumps
Shana Claeys
Geertrui Denecker
Wouter Van Loocke
Christophe Van Neste
Nadine Van Roy
Bram De Wilde
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2017
The FOXM1/BRIP1 axis in replicative stress induced DNA damage response in neuroblastoma : functional exploration and zebrafish modeling
Suzanne Vanhauwaert
Franki Speleman
Katleen De Preter
Dissertation
2017
The HBP1 tumor suppressor is a negative epigenetic regulator of MYCN driven neuroblastoma through interaction with the PRC2 complex
Geertrui Denecker
Shana Claeys
Irina Lambertz
Els Janssens
Suzanne Vanhauwaert
Bieke Decaesteker
Tom Van Maerken
Bram De Wilde
Genevieve Laureys
Katleen De Preter
Franki Speleman
C3
Conference
2017
The HBP1 tumour suppressor is a negative epigenetic regulator of MYCN-driven neuroblastoma through interaction with the PRC2 complex
Shana Claeys
Geertrui Denecker
Bieke Decaesteker
Els Janssens
Candy Kumps
Sara De Brouwer
Irina Lambertz
Annelies Fieuw
Suzanne Vanhauwaert
Tom Van Maerken
Genevieve Laureys
Christophe Van Neste
Bram De Wilde
Kaat Durinck
Katleen De Preter
Franki Speleman
C3
Conference
2017
The core regulatory circuit component TBX2 is implicated in cell cycle control and proliferation in neuroblastoma
Bieke Decaesteker
Geertrui Denecker
Wouter Van Loocke
Pauline Depuydt
Fanny De Vloed
Shana Claeys
Dries Rombaut
Siebe Loontiens
Suzanne Vanhauwaert
Christophe Van Neste
Katleen De Preter
Franki Speleman
C3
Conference
2017
The immunophenotypic fingerprint of patients with primary antibody deficiencies is partially present in their asymptomatic first-degree relatives
Delfien Bogaert
Marieke De Bruyne
Veronique Debacker
Pauline Depuydt
Katleen De Preter
Carolien Bonroy
Jan Philippé
Victoria Bordon Maria
Bart Lambrecht
Tessa Kerre
Karim Vermaelen
Filomeen Haerynck
Melissa Dullaers
A1
Journal Article
in
HAEMATOLOGICA
2017
The immunophenotypical fingerprint of patients with primary antibody deficiencies is partially present in their asymptomatic first-degree relatives
Delfien Bogaert
Marieke De Bruyne
Veronique Debacker
Pauline Depuydt
Katleen De Preter
Carolien Bonroy
Jan Philippé
Victoria Bordon Maria
Bart Lambrecht
Tessa Kerre
Andrea Cerutti
Karim Vermaelen
Filomeen Haerynck
Melissa Dullaers
C3
Conference
2017
Zipper plot : visualizing transcriptional activity of genomic regions
Francisco Avila Cobos
Pieter-Jan Volders
Celine Everaert
Dries Rombaut
Jo Vandesompele
Katleen De Preter
Pieter Mestdagh
A1
Journal Article
in
BMC BIOINFORMATICS
2017
2016
An embryonic stem cell activated FOXM1 transcriptional program marks ultra-high-risk primary neuroblastoma patients for FDI-6 small molecule inhibition
Suzanne Vanhauwaert
Carina Leonelli
Sara De Brouwer
Jolien De Wyn
Anneleen Beckers
Jo Vandesompele
Franki Speleman
Katleen De Preter
C3
Conference
2016
Asthma inflammatory phenotypes show differential microRNA expression in sputum
Tania Maes
Francisco Avila Cobos
Katleen De Preter
Ken Bracke
Griet Conickx
Jo Vandesompele
Lies Lahousse
Pieter Mestdagh
Guy Joos
Guy Brusselle
A1
Journal Article
in
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
2016
Characterization of pancreatic glucagon-producing tumors and pituitary gland tumors in transgenic mice overexpressing MYCN in hGFAP-positive cells
Katleen De Preter
A1
Journal Article
in
ONCOTARGET
2016
Detection of copy number aberrations in cell free DNA from plasma of neuroblastoma patients using shallow massive parallel sequencing
Katleen De Preter
Nadine Van Roy
Björn Menten
Annelies Dheedene
Genevieve Laureys
Bram De Wilde
Franki Speleman
C3
Conference
2016
Dual targeting of ALK and RET: establishing a novel basis for the treatment of neuroblastoma
Liselot Mus
Shana Claeys
Bram De Wilde
Genevieve Laureys
Alan Van Goethem
Katleen De Preter
Irina Lambertz
Franki Speleman
C3
Conference
2016
Dual targeting of ALK and RET: establishing a novel basis for the treatment of neuroblastoma
Liselot Mus
Shana Claeys
Bram De Wilde
Genevieve Laureys
Alan Van Goethem
Katleen De Preter
Irina Lambertz
Franki Speleman
C3
Conference
2016
ETV5 functionally connect ALK and CXCR4 signaling in neuroblastoma
Irina Lambertz
Shana Claeys
Candy Kumps
Liselot Mus
Nadine Van Roy
Bram De Wilde
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2016
ETV5 functionally connects ALK and CXCR4 signaling in neuroblastoma
Irina Lambertz
Liselot Mus
Candy Kumps
Shana Claeys
Bram De Wilde
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2016
Glutathione biosynthesis is upregulated at the initiation of MYCN-driven neuroblastoma tumorigenesis
Anneleen Beckers
Katleen De Preter
Franki Speleman
A1
Journal Article
in
MOLECULAR ONCOLOGY
2016
Improving marker gene discovery from high-dimensional single-cell snapshot data
Robrecht Cannoodt
Wouter Saelens
Katleen De Preter
Yvan Saeys
C3
Conference
2016
LncRNAs in the context of Chronic Obstructive Pulmonary Disease (COPD) are associated to immune response and metabolism of xenobiotics
Francisco Avila Cobos
Ken Bracke
Jo Vandesompele
Kimberly Verniers
Guy Joos
Katleen De Preter
Guy Brusselle
Pieter Mestdagh
C3
Conference
2016
MYCN and HDAC5 transcriptionally repress CD9 to trigger invasion and metastasis in neuroblastoma
Anneleen Beckers
Katleen De Preter
Anneleen Decock
Franki Speleman
A1
Journal Article
in
ONCOTARGET
2016
Methyl-CpG-binding domain sequencing reveals a prognostic methylation signature in neuroblastoma
Anneleen Decock
Maté Ongenaert
Robrecht Cannoodt
Kimberly Verniers
Bram De Wilde
Genevieve Laureys
Nadine Van Roy
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2016
Methyl-CpG-binding domain sequencing reveals a prognostic methylation signature in neuroblastoma
Anneleen Decock
Maté Ongenaert
Robrecht Cannoodt
Kimberly Verniers
Bram De Wilde
Genevieve Laureys
Nadine Van Roy
Katleen De Preter
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
ONCOTARGET
2016
Optimization of a lentiviral inducible CRISPR/Cas9 system to modulate genes essential for sustained growth of cells
Bieke Decaesteker
Suzanne Vanhauwaert
Carina Leonelli
Fanny De Vloed
Givani Dewyn
Katleen De Preter
Franki Speleman
C3
Conference
2016
Rol van microRNA in neutrofiel astma
Tania Maes
Francisco Avila Cobos
Katleen De Preter
Ken Bracke
Griet Conickx
Jo Vandesompele
Lies Lahousse
Pieter Mestdagh
Guy Joos
Guy Brusselle
A4
Journal Article
in
BLOEDVATEN HART LONGEN
2016
SOX11 acts as part of the MYCN regulatory protein complex implicated in neuroblastoma
Bieke Decaesteker
Sara De Brouwer
Suzanne Vanhauwaert
Fanny De Vloed
Anneleen Beckers
Genevieve Laureys
Franki Speleman
Katleen De Preter
C3
Conference
2016
Sensing mutant ALK: Capicua and ETV5 as executors of aberrant ALK-driven MAPK signaling
Irina Lambertz
Liselot Mus
Candy Kumps
Shana Claeys
Wouter Van Loocke
Christophe Van Neste
Nadine Van Roy
Bram De Wilde
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2016
Targeting MYCN-driven transcription by BET-bromodomain inhibition
Anneleen Beckers
Franki Speleman
Katleen De Preter
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2016
The BRIP1/FANCJ DNA helicase is a druggable 17q driver oncogene involved in G-quadruplex induced replicative stress resistance in neuroblastoma
Suzanne Vanhauwaert
Annelies Fieuw
Carina Leonelli
Bieke Decaesteker
Jolien De Wyn
Pauline Depuydt
Sara De Brouwer
Nadine Van Roy
Katleen De Preter
Franki Speleman
C3
Conference
2016
The HBP1 tumor suppressor is a negative epigenetic regulator of MYCN driven neuroblastoma through interaction with the PRC2 complex
Shana Claeys
Irina Lambertz
Els Janssens
Suzanne Vanhauwaert
Bieke Decaesteker
Candy Kumps
Sara De Brouwer
Annelies Fieuw
Tom Van Maerken
Bram De Wilde
Genevieve Laureys
Katleen De Preter
Franki Speleman
C3
Conference
2016
The HBP1 tumor suppressor is a negative epigenetic regulator of MYCN driven neuroblastoma through interaction with the PRC2 complex
Shana Claeys
Irina Lambertz
Els Janssens
Suzanne Vanhauwaert
Bieke Decaesteker
Candy Kumps
Sara De Brouwer
Annelies Fieuw
Tom Van Maerken
Bram De Wilde
Genevieve Laureys
Katleen De Preter
Franki Speleman
C3
Conference
2016
The TBX2 super-enhancer marked transcription factor on 17q is overexpressed in neuroblastoma and infers poor prognosis
Bieke Decaesteker
Fanny De Vloed
Siebe Loontiens
Geertrui Denecker
Wouter Van Loocke
Dries Rombaut
Anneleen Beckers
Shana Claeys
Suzanne Vanhauwaert
Katleen De Preter
Franki Speleman
C3
Conference
2016
The TBX2 super-enhancer marked transcription factor on 17q is overexpressed in neuroblastoma and infers poor prognosis
Bieke Decaesteker
Wouter Van Loocke
Anneleen Beckers
Siebe Loontiens
Katleen De Preter
Franki Speleman
C3
Conference
2016
The chromosome 17q super-enhancer landscape in neuroblastoma
Bieke Decaesteker
Wouter Van Loocke
Francisco Avila Cobos
Anneleen Beckers
Katleen De Preter
Franki Speleman
C3
Conference
2016
The genomic region encompassing the overlapping SOX11 and Lnc-SOX11-1:1 loci exhibits a complex DNA copy number and mRNA expression pattern
Bieke Decaesteker
Sara De Brouwer
Robrecht Cannoodt
Dries Rombaut
Wouter Van Loocke
Annelies Fieuw
Fanny De Vloed
Pieter-Jan Volders
Björn Menten
Franki Speleman
Katleen De Preter
C3
Conference
2016
The immunophenotypical landscape of patients with primary antibody deficiencies and their asymptomatic first-degree relatives : arguments for a multifactorial aetiology
Delfien Bogaert
Pauline Depuydt
Katleen De Preter
Carolien Bonroy
Jan Philippé
Victoria Bordon Maria
Tessa Kerre
Bart Lambrecht
Andrea Cerutti
Karim Vermaelen
Elfride De Baere
Filomeen Haerynck
Melissa Dullaers
C3
Conference
2016
Unbiased modelling of dynamic processes with single-cell RNA-sequencing
Robrecht Cannoodt
Wouter Saelens
Katleen De Preter
Yvan Saeys
C3
Conference
2016
Unbiased modelling of dynamic processes with single-cell RNA-sequencing
Robrecht Cannoodt
Wouter Saelens
Katleen De Preter
Yvan Saeys
C3
Conference
2016
Unbiased modelling of dynamic processes with single-cell RNA-sequencing
Robrecht Cannoodt
Wouter Saelens
Katleen De Preter
Yvan Saeys
C3
Conference
2016
2015
A Cre-conditional MYCN-driven neuroblastoma mouse model as an improved tool for preclinical studies
Anneleen Beckers
Katleen De Preter
Candy Kumps
Franki Speleman
A1
Journal Article
in
ONCOGENE
2015
An embryonic stem cell activated FOXM1 transcriptional program marks ultra-high-risk primary neuroblastoma patients for FDI-6 small molecule inhibition
Suzanne Vanhauwaert
Carina Leonelli
Sara De Brouwer
Jolien De Wyn
Anneleen Beckers
Jo Vandesompele
Franki Speleman
Katleen De Preter
C3
Conference
2015
Differential module analysis in neuroblastoma regulatory networks
Robrecht Cannoodt
Anneleen Beckers
Caroline Van Cauwenbergh
Franki Speleman
Katleen De Preter
Yvan Saeys
C3
Conference
2015
ETV5 functionally connect ALK and RET signaling in neuroblastoma
Irina Lambertz
Shana Claeys
Candy Kumps
Liselot Mus
Anneleen Beckers
Nadine Van Roy
Genevieve Laureys
Olivier De Wever
Katleen De Preter
Franki Speleman
C3
Conference
2015
Genome wide expression profiling of p53 regulated miRNAs in neuroblastoma
Ali Rihani
Alan Van Goethem
Maté Ongenaert
Sara De Brouwer
Pieter-Jan Volders
Katleen De Preter
Pieter Mestdagh
Franki Speleman
Jo Vandesompele
Tom Van Maerken
A1
Journal Article
in
SCIENTIFIC REPORTS
2015
HBP1 downregulation through mutant ALK represents a novel mechanism for cooperative MYCN activation in neuroblastoma
Shana Claeys
Irina Lambertz
Alan Van Goethem
Candy Kumps
Sara De Brouwer
Annelies Fieuw
Tom Van Maerken
Katleen De Preter
Franki Speleman
C3
Conference
2015
Identification of differentially expressed microRNAs in neutrophilic asthma
Tania Maes
Katleen De Preter
Ken Bracke
Lies Lahousse
Pieter Mestdagh
Guy Joos
Guy Brusselle
C3
Conference
2015
Individual patient risk stratification of high-risk neuroblastomas using a two-gene score suited for clinical use
Katleen De Preter
Jo Vandesompele
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2015
Inferring developmental chronologies from single cell RNA
Robrecht Cannoodt
Wouter Saelens
Katleen De Preter
Yvan Saeys
C3
Conference
2015
Integrated and cross-species omics analyses identify the DNA damage response pathway as an important vulnerable pathway in aggressive neuroblastoma tumors
Katleen De Preter
Anneleen Beckers
Suzanne Vanhauwaert
Annelies Fieuw
Sara De Brouwer
Pieter Mestdagh
Jo Vandesompele
Franki Speleman
C3
Conference
2015
Integrated genomic analysis identifies specific alterations and activation of YAP in relapsed neuroblastoma
Katleen De Preter
Franki Speleman
C3
Conference
2015
MYCN transcriptionally represses CD9 to trigger an invasion-metastasis cascade in neuroblastoma
Anneleen Beckers
Katleen De Preter
Franki Speleman
C3
Conference
2015
MYCN-driven regulatory mechanisms controlling LIN28B in neuroblastoma
Anneleen Beckers
Gert Van Peer
Hetty Helsmoortel
Yves Benoit
Jo Vandesompele
Katleen De Preter
Franki Speleman
A1
Journal Article
in
CANCER LETTERS
2015
MYCN-targeting miRNAs are predominantly downregulated during MYCN-driven neuroblastoma tumor formation
Anneleen Beckers
Gert Van Peer
Pieter Mestdagh
Jo Vandesompele
Katleen De Preter
Franki Speleman
A1
Journal Article
in
ONCOTARGET
2015
Methyl-CpG-binding domain sequencing reveals a prognostic methylation signature in neuroblastoma
Anneleen Decock
Maté Ongenaert
Robrecht Cannoodt
Kimberly Verniers
Bram De Wilde
Genevieve Laureys
Nadine Van Roy
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2015
Mutational dynamics between primary and relapse neuroblastomas
Katleen De Preter
Franki Speleman
A1
Journal Article
in
NATURE GENETICS
2015
Synergistic combined molecular treatment targeting the HBP1 tumor suppressor gene in neuroblastoma
Shana Claeys
Irina Lambertz
Alan Van Goethem
Anneleen Beckers
Candy Kumps
Tom Van Maerken
Katleen De Preter
Franki Speleman
C3
Conference
2015
Targeting super-enhancer induced gene expression with the novel BRD4 inhibitor OTX015 in preclinical models of MYCN-amplified neuroblastoma
Anneleen Beckers
Franki Speleman
Katleen De Preter
C3
Conference
2015
The HBP1 tumour suppressor at multiple regulatory cross roads in neuroblastoma
Shana Claeys
Irina Lambertz
Alan Van Goethem
Anneleen Beckers
Candy Kumps
Tom Van Maerken
Katleen De Preter
Franki Speleman
C3
Conference
2015
The chromosome 17q super-enhancer landscape in neuroblastoma
Bieke Decaesteker
Wouter Van Loocke
Anneleen Beckers
Katleen De Preter
Franki Speleman
C3
Conference
2015
The chromosome 17q super-enhancer landscape in neuroblastoma
Bieke Decaesteker
Anneleen Beckers
Katleen De Preter
Franki Speleman
C3
Conference
2015
Therapeutic targeting of the MYC signal by inhibition of histone chaperone FACT in neuroblastoma
Franki Speleman
Katleen De Preter
Anneleen Beckers
A1
Journal Article
in
SCIENCE TRANSLATIONAL MEDICINE
2015
Unraveling the MYCN-driven transcriptional landscape of neuroblastoma : a cross-species integrated transcriptome approach
Anneleen Beckers
Franki Speleman
Katleen De Preter
Dissertation
2015
Upregulation of MAPK negative feedback regulators and RET in mutant ALK neuroblastoma : implications for targeted treatment
Irina Lambertz
Candy Kumps
Shana Claeys
Anneleen Beckers
Sara De Brouwer
Genevieve Laureys
David Camacho-Trujillo
Nadine Van Roy
Alan Van Goethem
Tom Van Maerken
Franki Speleman
Katleen De Preter
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2015
Upregulation of MAPK negative feedback regulators and RET in mutant ALK neuroblastoma : implications for targeted treatment
Irina Lambertz
Candy Kumps
Shana Claeys
Anneleen Beckers
Els Janssens
David Camacho-Trujillo
Sara De Brouwer
Genevieve Laureys
Nadine Van Roy
Alan Van Goethem
Tom Van Maerken
Franki Speleman
Katleen De Preter
C3
Conference
2015
Upregulation of MAPK negative feedback regulators and RET in mutant ALK neuroblastoma : implications for targeted treatment
Irina Lambertz
Candy Kumps
Shana Claeys
Anneleen Beckers
Els Janssens
David Camacho-Trujillo
Sara De Brouwer
Genevieve Laureys
Nadine Van Roy
Alan Van Goethem
Tom Van Maerken
Franki Speleman
Katleen De Preter
C3
Conference
2015
Upregulation of MAPK negative feedback regulators and RET in mutant ALK neuroblastoma : implications for targeted treatment
Irina Lambertz
Candy Kumps
Shana Claeys
Anneleen Beckers
Els Janssens
David Camacho-Trujillo
Sara De Brouwer
Genevieve Laureys
Nadine Van Roy
Alan Van Goethem
Tom Van Maerken
Franki Speleman
Katleen De Preter
C3
Conference
2015
2014
Activated Alk triggers prolonged neurogenesis and Ret upregulation providing a therapeutic target in ALK-mutated neuroblastoma
Katleen De Preter
Candy Kumps
Franki Speleman
A1
Journal Article
in
ONCOTARGET
2014
Characterization of ALK driven molecular networks identifies perturbed RET and cholinergic signaling in neuroblastoma
Irina Lambertz
Candy Kumps
Shana Claeys
Anneleen Beckers
Sara De Brouwer
Genevieve Laureys
Alan Van Goethem
Tom Van Maerken
Nadine Van Roy
Franki Speleman
Katleen De Preter
C3
Conference
2014
Differential module analysis in neuroblastoma regulatory networks
Robrecht Cannoodt
Anneleen Beckers
Caroline Van Cauwenbergh
Katleen De Preter
Yvan Saeys
C3
Conference
2014
Genetisch geïnspireerde toekomstperspectieven voor de therapie van het neuroblastoom
Bram De Wilde
Tom Van Maerken
Katleen De Preter
Nadine Van Roy
Genevieve Laureys
Jo Vandesompele
Franki Speleman
A2
Journal Article
in
TIJDSCHRIFT VOOR GENEESKUNDE
2014
Genome-wide methylation analysis unravels differential DNA methylation patterns between (prognostic) neuroblastoma patient subgroups
Anneleen Decock
Maté Ongenaert
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2014
Histone chaperone CHAF1A inhibits differentiation and promotes aggressive neuroblastoma
Katleen De Preter
Steve Lefever
Franki Speleman
A1
Journal Article
in
CANCER RESEARCH
2014
Identifying novel neuroblastoma oncogenes using semi-supervised learning
Leen De Baets
Robrecht Cannoodt
Joeri Ruyssinck
Katleen De Preter
Tom Dhaene
Yvan Saeys
C3
Conference
2014
Integrated genomic analyses for driver gene identification in neuroblastoma
Annelies Fieuw
Franki Speleman
Katleen De Preter
Dissertation
2014
MYCN safeguards its upregulated expression through negatively controlling its upstream miRNAs
Anneleen Beckers
Gert Van Peer
Jo Vandesompele
Katleen De Preter
Franki Speleman
C3
Conference
2014
Promoter DNA-methylation in the TH-MYCN neuroblastoma mouse model
Anneleen Beckers
Wouter Van Loocke
Anneleen Decock
Maté Ongenaert
Jo Vandesompele
Franki Speleman
Katleen De Preter
C3
Conference
2014
Reduced DICER1 functionality in neuroblastoma through reduced expression levels or somatic mutations
Bram De Wilde
Anneleen Beckers
Annelies Fieuw
Katleen De Preter
Pieter Mestdagh
Jo Vandesompele
Franki Speleman
C3
Conference
2014
Robust selection of cancer survival signatures from high-throughput genomic data using two-fold subsampling
Katleen De Preter
Pieter Mestdagh
A1
Journal Article
in
PLOS ONE
2014
SOX11 is a lineage-survival oncogene in neuroblastoma
Bieke Decaesteker
Sara De Brouwer
Anneleen Beckers
Genevieve Laureys
Franki Speleman
Katleen De Preter
C3
Conference
2014
SOX11 is a lineage-survival oncogene in neuroblastoma
Sara De Brouwer
Bieke Decaesteker
Anneleen Beckers
Genevieve Laureys
Franki Speleman
Katleen De Preter
C3
Conference
2014
SOX11 is a lineage-survival oncogene in neuroblastoma
Bieke Decaesteker
Sara De Brouwer
Franki Speleman
Katleen De Preter
C3
Conference
2014
SOX11 is a lineage-survival oncogene in neuroblastoma
Bieke Decaesteker
Sara De Brouwer
Anneleen Beckers
Franki Speleman
Katleen De Preter
C3
Conference
2014
The HBP1 tumor suppressor is a druggable ALK downregulated gene controlling MYCN activity
Shana Claeys
Candy Kumps
Irina Lambertz
Sara De Brouwer
Alan Van Goethem
Tom Van Maerken
Katleen De Preter
Franki Speleman
C3
Conference
2014
The HBP1 tumor suppressor is a druggable ALK downregulated gene controlling MYCN activity
Shana Claeys
Candy Kumps
Irina Lambertz
Sara De Brouwer
Alan Van Goethem
Tom Van Maerken
Katleen De Preter
Franki Speleman
C3
Conference
2014
The MYCN/miR-26a-5p/LIN28B regulatory axis controls MYCN-driven LIN28B upregulation in neuroblastoma
Anneleen Beckers
Gert Van Peer
Sara De Brouwer
Jo Vandesompele
Katleen De Preter
Franki Speleman
C3
Conference
2014
The MYCN/miR-26a-5p/LIN28B regulatory axis explains MYCN driven LIN28B upregulation during mouse neuroblastoma development
Anneleen Beckers
Gert Van Peer
Jo Vandesompele
Katleen De Preter
Franki Speleman
C3
Conference
2014
Time-resolved transcriptome analysis of TH-MYCN driven hyperplastic ganglia and tumors marks BRD3 as a novel candidate oncogene
Anneleen Beckers
Jo Vandesompele
Katleen De Preter
Franki Speleman
C3
Conference
2014
ViVar: a comprehensive platform for the analysis and visualization of structural genomic variation
Tom Sante
Sarah Vergult
Pieter-Jan Volders
Geert Trooskens
Katleen De Preter
Annelies Dheedene
Franki Speleman
Tim De Meyer
Björn Menten
A1
Journal Article
in
PLOS ONE
2014
2013
A p53 drug response signature identifies prognostic genes in high-risk neuroblastoma
Katleen De Preter
Franki Speleman
A1
Journal Article
in
PLOS ONE
2013
Different Sarcocystis spp. are present in bovine eosinophilic myositis
Lieve Vangeel
Kurt Houf
Peter Geldhof
Katleen De Preter
Jozef Vercruysse
Richard Ducatelle
Koen Chiers
A1
Journal Article
in
VETERINARY PARASITOLOGY
2013
Dynamic regulation of miRNAs implicated in the MYCN-EZH2 regulatory axis during neuroblastoma tumor initiation and progression in a MYCN mouse model
Anneleen Beckers
Katleen De Preter
Gert Van Peer
Sara De Brouwer
Pieter Mestdagh
Genevieve Laureys
Jo Vandesompele
Franki Speleman
C3
Conference
2013
ERBB3 is a marker of a ganglioneuroblastoma/ganglioneuroma-like expression profile in neuroblastic tumours
Katleen De Preter
A1
Journal Article
in
MOLECULAR CANCER
2013
Evaluation of qPCR curve analysis methods for reliable biomarker discovery: bias, resolution, precision, and implications
Katleen De Preter
Stefaan Derveaux
Jan Hellemans
Jo Vandesompele
A1
Journal Article
in
METHODS
2013
Focal DNA copy number changes in neuroblastoma target MYCN regulated genes
Candy Kumps
Annelies Fieuw
Pieter Mestdagh
Björn Menten
Steve Lefever
Filip Pattyn
Sara De Brouwer
Tom Sante
Nadine Van Roy
Tom Van Maerken
Genevieve Laureys
Jo Vandesompele
Katleen De Preter
Franki Speleman
A1
Journal Article
in
PLOS ONE
2013
Genome wide expression, mutation and methylation analysis validates three new mouse models for neuroblastoma targeting MYCN, ALK and LIN28B for pre-clinical studies
Anneleen Beckers
Bram De Wilde
Maté Ongenaert
Candy Kumps
Jo Vandesompele
Katleen De Preter
Franki Speleman
C3
Conference
2013
Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers
Anneleen Decock
Maté Ongenaert
Jasmien Hoebeeck
Katleen De Preter
Gert Van Peer
Wim Van Criekinge
Joëlle Vermeulen
Tom Van Maerken
Franki Speleman
Jo Vandesompele
U
Conference
2013
Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers
Anneleen Decock
Maté Ongenaert
Jasmien Hoebeeck
Katleen De Preter
Gert Van Peer
Wim Van Criekinge
Genevieve Laureys
Joëlle Vermeulen
Tom Van Maerken
Franki Speleman
Jo Vandesompele
C3
Conference
2013
Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers
Anneleen Decock
Maté Ongenaert
Jasmien Hoebeeck
Katleen De Preter
Gert Van Peer
Wim Van Criekinge
Genevieve Laureys
Tom Van Maerken
Franki Speleman
Jo Vandesompele
C3
Conference
2013
Identification of miRNAs implicated in neuroblastoma tumor initiation and progression through cross-species integrated genomic analysis
Anneleen Beckers
Katleen De Preter
Sara De Brouwer
Gert Van Peer
Pieter Mestdagh
Genevieve Laureys
Jo Vandesompele
Franki Speleman
C3
Conference
2013
Identifying and validating DNA methylation biomarkers: the example of neuroblastoma
Anneleen Decock
Maté Ongenaert
Jasmien Hoebeeck
Katleen De Preter
Gert Van Peer
Wim Van Criekinge
Genevieve Laureys
Joëlle Vermeulen
Tom Van Maerken
Franki Speleman
Jo Vandesompele
C3
Conference
2013
Improved outcome prediction of children with neuroblastoma using an integrated miRNA and DNA methylation signature
Anneleen Decock
Fjoralba Zeka
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2013
MYCN and ALKF1174L are sufficient to drive neuroblastoma development from neural crest progenitor cells
Katleen De Preter
Steve Lefever
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
ONCOGENE
2013
MYCN and HDAC2 cooperate to repress miR-183 signaling in neuroblastoma
Katleen De Preter
Filip Pattyn
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2013
Network inference by integrating biclustering and feature selection
Robrecht Cannoodt
Joeri Ruyssinck
Katleen De Preter
Tom Dhaene
Yvan Saeys
C3
Conference
2013
Perturbed signaling pathways in neuroblastoma : from MYCN to ALK and back
Candy Kumps
Franki Speleman
Katleen De Preter
Dissertation
2013
The MYCN driven murine and human neuroblastoma methylome and dynamic regulation of chromatin regulators as a guide for epigenetic therapy
Anneleen Beckers
Anneleen Decock
Gert Van Peer
Sara De Brouwer
Genevieve Laureys
Jo Vandesompele
Maté Ongenaert
Katleen De Preter
Franki Speleman
C3
Conference
2013
2012
ALK(F1174L) is a driving oncogene of neuroblastoma in transgenic mice
Candy Kumps
Katleen De Preter
Bram De Wilde
Jo Vandesompele
Franki Speleman
C3
Conference
2012
Cancer gene prioritization for targeted resequencing using fitSNP scores
Annelies Fieuw
Bram De Wilde
Franki Speleman
Jo Vandesompele
Katleen De Preter
A1
Journal Article
in
PLOS ONE
2012
Copy number defects of G1-cell cycle genes in neuroblastoma are frequent and correlate with high expression of E2F target genes and a poor prognosis
Katleen De Preter
Franki Speleman
A1
Journal Article
in
GENES CHROMOSOMES & CANCER
2012
Dickkopf-3 is regulated by the MYCN-induced miR-17-92 cluster in neuroblastoma
Sara De Brouwer
Pieter Mestdagh
Irina Lambertz
Filip Pattyn
Anne De Paepe
Katleen De Preter
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2012
Exon-level expression analyses identify MYCN and NTRK1 as major determinants of alternative exon usage and robustly predict primary neuroblastoma outcome
Jo Vandesompele
Joëlle Vermeulen
Katleen De Preter
Franki Speleman
A1
Journal Article
in
BRITISH JOURNAL OF CANCER
2012
Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers.
Anneleen Decock
Maté Ongenaert
Jasmien Hoebeeck
Katleen De Preter
Gert Van Peer
Wim Van Criekinge
Genevieve Laureys
Joëlle Vermeulen
Tom Van Maerken
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
GENOME BIOLOGY
2012
Genomic profiling of MYCN and ALKF1174L transgenic neuroblastoma mouse models provides insights into the dynamic process of tumor formation
Katleen De Preter
Anneleen Beckers
Candy Kumps
Pieter Mestdagh
Jo Vandesompele
Franki Speleman
C3
Conference
2012
Identification of a novel recurrent 1q42.2-1qter deletion in high risk MYCN single copy 11q deleted neuroblastomas
Annelies Fieuw
Candy Kumps
Filip Pattyn
Björn Menten
Nadine Van Roy
Sarah Vergult
Anne De Paepe
Jo Vandesompele
Katleen De Preter
Franki Speleman
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2012
Isolation of disseminated neuroblastoma cells from bone marrow aspirates for pretreatment risk assessment by array comparative genomic hybridization
Mado Vandewoestyne
Candy Kumps
Katrien Swerts
Björn Menten
Tim Lammens
Jan Philippé
Katleen De Preter
Genevieve Laureys
Nadine Van Roy
Franki Speleman
Dieter Deforce
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2012
MiR-137 is epigenetically silenced in MYCN amplified neuroblastoma and targets the polycomb repressive complex 2 (PRC2) component EZH2
Anneleen Beckers
Maté Ongenaert
Anneleen Decock
Candy Kumps
Filip Pattyn
Pieter Mestdagh
Franki Speleman
Katleen De Preter
U
Conference
2012
MiR-137 is epigenetically silenced in MYCN amplified neuroblastomas and targets the polycomb repressive complex 2 (PRC2) component EZH2
Anneleen Beckers
Maté Ongenaert
Anneleen Decock
Candy Kumps
Filip Pattyn
Pieter Mestdagh
Franki Speleman
Katleen De Preter
C3
Conference
2012
N-Cadherin in neuroblastoma disease : expression and clinical significance
Tim Lammens
Katrien Swerts
Lara Derycke
Sara De Brouwer
Katleen De Preter
Nadine Van Roy
Jo Vandesompele
Franki Speleman
Jan Philippé
Yves Benoit
Marc Bracke
Genevieve Laureys
A1
Journal Article
in
PLOS ONE
2012
Pharmacological activation of the p53 pathway by nutlin-3 exerts anti-tumoral effects in medulloblastomas
Katleen De Preter
Franki Speleman
A1
Journal Article
in
NEURO-ONCOLOGY
2012
Promoter methylation analysis identifies prognostic methylation biomarkers in neuroblastoma
Anneleen Decock
Maté Ongenaert
Jasmien Hoebeeck
Katleen De Preter
Gert Van Peer
Wim Van Criekinge
Genevieve Laureys
Joëlle Vermeulen
Tom Van Maerken
Franki Speleman
Jo Vandesompele
C3
Conference
2012
Targeted expression of mutated ALK induces neuroblastoma in transgenic mice
Katleen De Preter
Candy Kumps
Bram De Wilde
Filip Pattyn
Pieter Mestdagh
Björn Menten
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
SCIENCE TRANSLATIONAL MEDICINE
2012
Transcriptional miRNA/mRNA networks in neuroblastoma: from integrative analysis to molecular therapy
Sara De Brouwer
Franki Speleman
Katleen De Preter
Dissertation
2012
2011
A 6-gene signature identifies four molecular subgroups of neuroblastoma
Katleen De Preter
Joëlle Vermeulen
A1
Journal Article
in
CANCER CELL INTERNATIONAL
2011
EVI1-mediated down regulation of MIR449A is essential for the survival of EVI1 positive leukaemic cells
An De Weer
Joni Van der Meulen
Pieter Rondou
Tom Taghon
Katleen De Preter
Pieter Mestdagh
Tom Van Maerken
Nadine Van Roy
Lucien Noens
Anne De Paepe
Bruno Verhasselt
Jan Philippé
Jo Vandesompele
Pieter Van Vlierberghe
Bruce Poppe
Franki Speleman
A1
Journal Article
in
BRITISH JOURNAL OF HAEMATOLOGY
2011
High ALK receptor tyrosine kinase expression supersedes ALK mutation as a determining factor of an unfavorable phenotype in primary neuroblastoma
Katleen De Preter
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2011
Identification of a new rare recurrent 1q42.2-qter deletion in neuroblastoma
Annelies Fieuw
Candy Kumps
Björn Menten
Nadine Van Roy
Sarah Vergult
Jo Vandesompele
Katleen De Preter
Franki Speleman
C3
Conference
2011
Identification of tumoral glial precursor cells in neuroblastoma
Katleen De Preter
Candy Kumps
A1
Journal Article
in
CANCER LETTERS
2011
Measurable impact of RNA quality on gene expression results from quantitative PCR
Joëlle Vermeulen
Katleen De Preter
Steve Lefever
Justine Nuytens
Fanny De Vloed
Stefaan Derveaux
Jan Hellemans
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2011
Neuroblastoma genetics and phenotype: a tale of heterogeneity
Franki Speleman
Katleen De Preter
Jo Vandesompele
A1
Journal Article
in
SEMINARS IN CANCER BIOLOGY
2011
Pharmacological activation of the p53 pathway by nutlin-3 inhibits medulloblastoma cell proliferation in vitro and in vivo
Katleen De Preter
Jo Vandesompele
C3
Conference
2011
miRNA Expression profiling enables risk stratification in archived and fresh neuroblastoma tumor samples
Katleen De Preter
Pieter Mestdagh
Joëlle Vermeulen
Fjoralba Zeka
Genevieve Laureys
Nadine Van Roy
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2011
2010
Accurate Outcome Prediction in Neuroblastoma across Independent Data Sets Using a Multigene Signature
Katleen De Preter
Joëlle Vermeulen
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2010
Accurate prediction of neuroblastoma outcome based on miRNA expression profiles
Pieter Mestdagh
Joëlle Vermeulen
Katleen De Preter
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2010
Accurate prediction of neuroblastoma outcome based on miRNA expression profiles
Pieter Mestdagh
Joëlle Vermeulen
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2010
An integrative genomics screen uncovers ncRNA T-UCR functions in neuroblastoma tumours
Pieter Mestdagh
Filip Pattyn
Ali Rihani
Tom Van Maerken
Joëlle Vermeulen
Candy Kumps
Björn Menten
Katleen De Preter
Genevieve Laureys
Franki Speleman
Jo Vandesompele
C3
Conference
2010
An integrative genomics screen uncovers ncRNA T-UCR functions in neuroblastoma tumours
Pieter Mestdagh
Filip Pattyn
Ali Rihani
Tom Van Maerken
Joëlle Vermeulen
Candy Kumps
Björn Menten
Katleen De Preter
Genevieve Laureys
David Nittner
Jean-Christophe Marine
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
ONCOGENE
2010
Chromosomal and microRNA expression patterns reveal biologically distinct subgroups of 11q- neuroblastoma
Pieter Mestdagh
Katleen De Preter
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2010
High expression of the ALK receptor tyrosine kinase precedes mutation as a determining factor of unfavourable phenotype in primary neuroblastoma
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2010
MYCN/c-MYC-induced microRNAs repress coding gene networks associated with poor outcome in MYCN/c-MYC-activated tumors
Pieter Mestdagh
Filip Pattyn
Joëlle Vermeulen
Candy Kumps
Katleen De Preter
Nadine Van Roy
Genevieve Laureys
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
ONCOGENE
2010
Meta-analysis of neuroblastomas reveals a skewed ALK mutation spectrum in tumors with MYCN amplification
Sara De Brouwer
Katleen De Preter
Candy Kumps
Jo Vandesompele
Jasmien Hoebeeck
Tom Van Maerken
Anne De Paepe
Genevieve Laureys
Joëlle Vermeulen
Nadine Van Roy
Franki Speleman
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2010
Multiplex Amplicon Quantification (MAQ), a fast and efficient method for the simultaneous detection of copy number alterations in neuroblastoma
Candy Kumps
Nadine Van Roy
Jo Vandesompele
Franki Speleman
Katleen De Preter
A1
Journal Article
in
BMC GENOMICS
2010
Pharmacologic activation of the P53 pathway by Nutlin-3 inhibits medulloblastoma cell proliferation in vitro
Katleen De Preter
Jo Vandesompele
C3
Conference
2010
Predicting outcomes for children with neuroblastoma
Joëlle Vermeulen
Katleen De Preter
Pieter Mestdagh
Genevieve Laureys
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
DISCOVERY MEDICINE
2010
The quassinoid derivative NBT-272 targets both the AKT and ERK signaling pathways in embryonal tumors
Candy Kumps
Katleen De Preter
Franki Speleman
A1
Journal Article
in
MOLECULAR CANCER THERAPEUTICS
2010
2009
59-gene prognostic signature sub-stratifies high-risk neuroblastoma patients
Joëlle Vermeulen
Katleen De Preter
Genevieve Laureys
Franki Speleman
Jo Vandesompele
Editorial material
2009
Comparison of miRNA profiles of microdissected Hodgkin/Reed-Sternberg cells and Hodgkin cell lines versus CD77+ B-cells reveals a distinct subset of differentially expressed miRNAs
Pieter Van Vlierberghe
An De Weer
Pieter Mestdagh
Katleen De Preter
Anne De Paepe
Kathleen Lambein
Jo Vandesompele
Nadine Van Roy
Bruno Verhasselt
Bruce Poppe
Franki Speleman
A1
Journal Article
in
BRITISH JOURNAL OF HAEMATOLOGY
2009
Downregulation of miR-449a is essential for the survival of EVI1 positive leukemic cells through modulation of NOTCH1 and BCL2
An De Weer
Pieter Mestdagh
Katleen De Preter
Joni Van der Meulen
Pieter Van Vlierberghe
Tom Van Maerken
Nadine Van Roy
Lucien Noens
Anne De Paepe
Bruno Verhasselt
Jan Philippé
Jo Vandesompele
Bruce Poppe
Franki Speleman
C3
Conference
2009
External oligonucleotide standards enable cross laboratory comparison and exchange of real-time quantitative PCR data
Joëlle Vermeulen
Filip Pattyn
Katleen De Preter
Liesbeth Vercruysse
Stefaan Derveaux
Pieter Mestdagh
Steve Lefever
Jan Hellemans
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2009
Gebruik van genexpresieanalyse in de aanpak van neuroblastoom bij kinderen
Joëlle Vermeulen
Katleen De Preter
Pieter Mestdagh
Filip Pattyn
Anne De Paepe
Nadine Van Roy
Genevieve Laureys
Franki Speleman
Jo Vandesompele
A4
Journal Article
in
ONCO (NEDERLANDSE ED.)
2009
MODULATION OF MIR-449A EXPRESSION DECREASES CELL VIABILITY, INCREASES APOPTOSIS AND INDUCES DIFFERENTIATION IN EVI1 DEREGULATED LEUKEMIA CELLS
An De Weer
Bruce Poppe
Pieter Mestdagh
Katleen De Preter
Pieter Van Vlierberghe
Nadine Van Roy
Bruno Verhasselt
Jan Philippé
Lucien Noens
Anne De Paepe
Jo Vandesompele
Franki Speleman
C3
Conference
2009
Meta-mining of Neuroblastoma and Neuroblast Gene Expression Profiles Reveals Candidate Therapeutic Compounds
Katleen De Preter
Sara De Brouwer
Tom Van Maerken
Filip Pattyn
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2009
Modeling neuroblastomagenesis from neural crest stem cells in vitro and in vivo
Katleen De Preter
Jo Vandesompele
Franki Speleman
C3
Conference
2009
Predicting outcomes for children with neuroblastoma using a multigene-expression signature: a retrospective SIOPEN/COG/GPOH study
Joëlle Vermeulen
Katleen De Preter
Liesbeth Vercruysse
Nadine Van Roy
Jan Hellemans
Katrien Swerts
Genevieve Laureys
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
LANCET ONCOLOGY
2009
Prognostic role and functional analyses of miRNA expression in neuroblastoma
Pieter Mestdagh
Katleen De Preter
Jo Vandesompele
C3
Conference
2009
RNA pre-amplification enables large-scale RT-qPCR gene-expression studies on limiting sample amounts
Joëlle Vermeulen
Stefaan Derveaux
Steve Lefever
Els De Smet
Katleen De Preter
Nurten Yigit
Anne De Paepe
Filip Pattyn
Franki Speleman
Jo Vandesompele
A2
Journal Article
in
BMC RESEARCH NOTES
2009
Sarcocystis in bovine eosinophilic myositis: contribution to pathogenesis
Lieve Vangeel
Kurt Houf
Peter Geldhof
Heidi Nollet
Katleen De Preter
Jozef Vercruysse
Richard Ducatelle
Koen Chiers
C3
Conference
2009
The emerging molecular pathogenesis of neuroblastoma : implications for improved risk assessment and targeted therapy
Nadine Van Roy
Katleen De Preter
Jasmien Hoebeeck
Tom Van Maerken
Filip Pattyn
Pieter Mestdagh
Joëlle Vermeulen
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
GENOME MEDICINE
2009
The miR-17-92 gene cluster is amplified and overexpressed in retinoblastoma
Pieter Mestdagh
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2009
The miR-17-92 gene cluster is amplified and overexpressed in retinoblastoma
Pieter Mestdagh
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2009
2008
Aberrant splicing of the PTPRD gene mimics microdeletions identified at this locus in neuroblastomas (vol 47, pg 197, 2008)
Katleen De Preter
Jo Vandesompele
Franki Speleman
Correction
2008
Aberrant splicing of the PTPRD gene mimics microdeletions identified-at locus this in neuroblastomas
Katleen De Preter
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
GENES CHROMOSOMES & CANCER
2008
CADM1 is a strong neuroblastoma candidate gene that maps within a 3.72 Mb critical region of loss on 11q23
Evi Michels
Jasmien Hoebeeck
Katleen De Preter
Anne De Paepe
Genevieve Laureys
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
BMC CANCER
2008
Copy number alterations and copy number variation in cancer: close encounters of the bad kind
Franki Speleman
Candy Kumps
Karen Buysse
Bruce Poppe
Björn Menten
Katleen De Preter
A1
Journal Article
in
CYTOGENETIC AND GENOME RESEARCH
2008
Expression profiling of a new class of non-coding RNAs in human neuroblastoma
Pieter Mestdagh
Filip Pattyn
Katleen De Preter
Joëlle Vermeulen
Anne De Paepe
Franki Speleman
Jo Vandesompele
C3
Conference
2008
Gene sets enrichment analysis of chromosomal regions
Katleen De Preter
Franki Speleman
Jo Vandesompele
C3
Conference
2008
High throughput stem-loop RT-PCR miRNA expression profiling using minute amounts of input RNA reveals new insights in neuroblastoma pathogenesis
Pieter Mestdagh
Joëlle Vermeulen
Katleen De Preter
Filip Pattyn
Genevieve Laureys
Franki Speleman
Jo Vandesompele
C3
Conference
2008
Identification of 2 putative critical segments of 17q gain in neuroblastoma through integrative genomics
Jo Vandesompele
Evi Michels
Katleen De Preter
Björn Menten
Anne De Paepe
Genevieve Laureys
Franki Speleman
Nadine Van Roy
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2008
Low-cost dedicated mini-arrays for high-throughput analysis of DNA copy-number alterations in neuroblastoma
Katleen De Preter
Björn Menten
Sara De Brouwer
Candy Kumps
Evi Michels
Nadine Van Roy
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
CANCER LETTERS
2008
Positional gene enrichment analysis of gene sets for high-resolution identification of overrepresented chromosomal regions
Katleen De Preter
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2008
Unmasking of epigenetically silenced microRNAs in neuroblastoma
Jasmien Hoebeeck
Geert Declerck
Pieter Mestdagh
Filip Pattyn
Katleen De Preter
Joëlle Vermeulen
Nurten Yigit
Anne De Paepe
Franki Speleman
Jo Vandesompele
C3
Conference
2008
2007
A detailed inventory of DNA copy number alterations in four commonly used Hodgkin lymphoma cell lines
Tom Feys
Bruce Poppe
Katleen De Preter
Nadine Van Roy
Bruno Verhasselt
Anne De Paepe
Franki Speleman
C3
Conference
2007
A detailed inventory of DNA copy number alterations in four commonly used Hodgkin's lymphoma cell lines
Tom Feys
Bruce Poppe
Katleen De Preter
Nadine Van Roy
Bruno Verhasselt
Anne De Paepe
Franki Speleman
A1
Journal Article
in
HAEMATOLOGICA
2007
ArrayCGH based classification of neuroblastoma into genomic subgroups
Sara De Brouwer
Evi Michels
Jo Vandesompele
Katleen De Preter
Jasmien Hoebeeck
Joëlle Vermeulen
Björn Menten
Anne De Paepe
Genevieve Laureys
Nadine Van Roy
Franki Speleman
C3
Conference
2007
ArrayCGH-based classification of neuroblastoma into genomic subgroups
Evi Michels
Jo Vandesompele
Katleen De Preter
Jasmien Hoebeeck
Joëlle Vermeulen
Björn Menten
Anne De Paepe
Genevieve Laureys
Nadine Van Roy
Franki Speleman
A1
Journal Article
in
GENES CHROMOSOMES & CANCER
2007
Detection of DNA copy number alterations in cancer by array comparative genomic hybridization
Evi Michels
Katleen De Preter
Nadine Van Roy
Franki Speleman
A1
Journal Article
in
GENETICS IN MEDICINE
2007
Genome wide promoter methylation analysis in neuroblastoma with perspectives for integrated molecular profiling
Jasmien Hoebeeck
Maté Ongenaert
Evi Michels
Katleen De Preter
Joëlle Vermeulen
Nurten Yigit
Anne De Paepe
Wim Van Criekinge
Franki Speleman
Jo Vandesompele
C3
Conference
2007
High resolution tiling-path BAC array deletion mapping suggests commonly involved 3p21-p22 tumor suppressor genes in neuroblastoma and more frequent tumors
Jasmien Hoebeeck
Evi Michels
Björn Menten
Nadine Van Roy
Katleen De Preter
Nurten Yigit
Els De Smet
Anne De Paepe
Genevieve Laureys
Jo Vandesompele
Franki Speleman
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2007
Integrative genomics in neuroblastoma research
Franki Speleman
Katleen De Preter
Evi Michels
Jasmien Hoebeeck
Filip Pattyn
Joëlle Vermeulen
Nadine Van Roy
Anne De Paepe
Genevieve Laureys
Jo Vandesompele
C3
Conference
2007
New insights into the genetic basis of neuroblastoma
Franki Speleman
Katleen De Preter
Jasmien Hoebeeck
Nadine Van Roy
Jo Vandesompele
A4
Journal Article
in
VERHANDELINGEN VAN DE KONINKLIJKE ACADEMIE VOOR GENEESKUNDE VAN BELGIË
2007
2006
Genome wide measurement of DNA copy number changes in neuroblastoma: dissecting amplicons and mapping losses, gains and breakpoints
Evi Michels
Jo Vandesompele
Jasmien Hoebeeck
Björn Menten
Katleen De Preter
Genevieve Laureys
Nadine Van Roy
Franki Speleman
A1
Journal Article
in
CYTOGENETIC AND GENOME RESEARCH
2006
Human fetal neuroblast and neuroblastoma transcriptome analysis confirms neuroblast origin and highlights neuroblastoma candidate genes
Katleen De Preter
Jo Vandesompele
Nurten Yigit
Yves Benoit
Anne De Paepe
Genevieve Laureys
Franki Speleman
A1
Journal Article
in
GENOME BIOLOGY
2006
The von Hippel-Lindau tumor suppressor gene expression level has prognostic value in neuroblastoma
Jasmien Hoebeeck
Jo Vandesompele
Katleen De Preter
Nadine Van Roy
Els De Smet
Nurten Yigit
Anne De Paepe
Genevieve Laureys
Franki Speleman
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2006
2005
No evidence for correlation of DDX1 gene amplification with improved survival probability in patients with MYCN-amplified neuroblastomas
Katleen De Preter
Franki Speleman
Anne De Paepe
Nadine Van Roy
Genevieve Laureys
Jo Vandesompele
A1
Journal Article
in
JOURNAL OF CLINICAL ONCOLOGY
2005
Positional and functional mapping of a neuroblastoma differentiation gene on chromosome 11
Katleen De Preter
Jo Vandesompele
Björn Menten
Nurten Yigit
Wim Waelput
Nadine Van Roy
Franki Speleman
A1
Journal Article
in
BMC GENOMICS
2005
Unequivocal delineation of clinicogenetic subgroups and development of a new model for improved outcome prediction in neuroblastoma
Jo Vandesompele
Katleen De Preter
Nadine Van Roy
Sylvia De Bie
Anne De Paepe
Genevieve Laureys
Franki Speleman
A1
Journal Article
in
JOURNAL OF CLINICAL ONCOLOGY
2005
arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays
Björn Menten
Filip Pattyn
Katleen De Preter
Piet Robbrecht
Evi Michels
Karen Buysse
Geert Mortier
Anne De Paepe
Stefan Vermeulen
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
BMC BIOINFORMATICS
2005
2004
Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons
Katleen De Preter
Filip Pattyn
Geert Berx
Kristin Strumane
Björn Menten
Frans Van Roy
Anne De Paepe
Franki Speleman
Jo Vandesompele
A1
Journal Article
in
BMC GENOMICS
2004
No evidence for involvement of SDHD in neuroblastoma pathogenesis
Katleen De Preter
Jo Vandesompele
Jasmien Hoebeeck
Joél Smet
Genevieve Laureys
Nadine Van Roy
Frank Roels
Rudy Van Coster
Marleen Praet
Anne De Paepe
Franki Speleman
A1
Journal Article
in
BMC CANCER
2004
2003
Application of laser capture microdissection in genetic analysis of neuroblastoma and neuroblastoma precursor cells
Katleen De Preter
Jo Vandesompele
Mireille Van Gele
Jasmien Hoebeeck
Els De Smet
Genevieve Laureys
Nadine Van Roy
Anne De Paepe
Franki Speleman
A1
Journal Article
in
CANCER LETTERS
2003
ID2 expression in neuroblastoma does not correlate to MYCN levels and lacks prognostic value
Jo Vandesompele
Katleen De Preter
Franki Speleman
A1
Journal Article
in
ONCOGENE
2003
Peroxisome mosaics
Frank Roels
Betty De Prest
Katleen De Preter
Marc Espeel
A1
Journal Article
in
Advances in Experimental Medicine and Biology
2003
2002
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele
Katleen De Preter
Filip Pattyn
Bruce Poppe
Nadine Van Roy
Anne De Paepe
Franki Speleman
A1
Journal Article
in
GENOME BIOLOGY
2002
Quantification of MYCN, DDX1, and NAG gene copy number in neuroblastoma using a real-time quantitative PCR assay.
Katleen De Preter
Franki Speleman
Genevieve Laureys
Anne De Paepe
Nadine Van Roy
Jo Vandesompele
A1
Journal Article
in
MODERN PATHOLOGY
2002