Research Explorer

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Project

Microbes-4-Immunity: single-cell based sorting and investigation of the functional microbiome in intestinal and extra-intestinal immune homeostasis.

Outputs and Outcomes

Publications

Metabolite-based inter-kingdom communication controls intestinal tissue recovery following chemotherapeutic injury.

Christopher AndersonLaura BoeckaertsPriscilla ChinJavier BurgoaWei XieAmanda GonçalvesGillian BlanckeSam BensonSebastian RogattiMariska S. SimpsonAnna DaveySze Men ChoiSandrien DesmetSummer D. BushmanGeert GoeminnePeter VandenabeeleMahesh S. DesaiLars VereeckeKodi Ravichandran et al.

A1 Journal Article in CELL HOST & MICROBE

Resource-efficient nitrogen removal from source-separated urine with partial nitritation/anammox in a membrane-aerated biofilm reactor

Marijn J. TimmerJolien De PaepeTim Van WinckelMarc SpillerIrina SpacovaKim De PaepeIsabel PintelonSarah LebeerWinnok H. De VosChristophe LasseurRamon GaniguéKai M. UdertSiegfried E. Vlaeminck et al.

A2 Journal Article in ACS ES&T ENGINEERING

Myeloid A20 is critical for alternative macrophage polarization and type-2 immune-mediated helminth resistance

Ioanna PettaMarie ThorpMaarten CiersGillian BlanckeLouis BoonTim MeeseFilip Van NieuwerburghAndy WullaertRichard GrencisDirk ElewautGeert van LooLars Vereecke et al.

A1 Journal Article in FRONTIERS IN IMMUNOLOGY

A guide to germ-free and gnotobiotic mouse technology to study health and disease

Maude JansLars Vereecke

A1 Journal Article in FEBS JOURNAL

Tregs protect against invariant NKT cell-mediated autoimmune colitis and hepatitis

Koen VenkenTine DecruyTim SparwasserDirk Elewaut

A1 Journal Article in IMMUNOLOGY

The intricate connection between bacterial α-diversity and fungal engraftment in the human gut of healthy and impaired individuals as studied using the in vitro SHIME® model

Benoit MarsauxFrederic MoensMassimo MarzoratiTom Van de Wiele

A1 Journal Article in JOURNAL OF FUNGI

Starch-entrapped microspheres enhance gut microbiome-mediated anti-obesity effects of resistant starch in high-fat diet induced obese C57BL/ 6J mice

Shaokang WangKim De PaepeTom Van de WieleXiong FuShujun WangBin ZhangQiang Huang

A1 Journal Article in FOOD RESEARCH INTERNATIONAL

Gut microbiota response to in vitro transit time variation is mediated by microbial growth rates, nutrient use efficiency and adaptation to in vivo transit time

Yorick MinneboKaren DelbaereValerie GoethalsJeroen RaesTom Van de WieleKim De Paepe

A1 Journal Article in MICROBIOME

Sterile triggers drive joint inflammation in TNF‐ and IL-1β‐dependent mouse arthritis models

Alexandra ThiranIoanna PettaGillian BlanckeMarie ThorpGuillaume PlanckaertMaude JansVanessa AndriesKorneel BarbryElisabeth GilisJulie CoudenysTino HochepiedChristian VanhoveEric GraceyEmilie DumasTeddy ManuelloIván JosipovicGeert van LooDirk ElewautLars Vereecke et al.

A1 Journal Article in EMBO MOLECULAR MEDICINE

The small intestine : dining table of host–microbiota meetings

Karen DelbaereInez RoegiersAuriane BronClaude DurifTom Van de WieleStéphanie Blanquet-DiotLudovica Marinelli

A1 Journal Article in FEMS MICROBIOLOGY REVIEWS

Gut inflammation in axial spondyloarthritis patients is characterized by a marked type 17 skewed mucosal innate‐like T cell signature

Céline MortierKatrien QuintelierAnn-Sophie De CraemerThomas RensonLiselotte DerooEmilie DumasEveline VerheugenJulie CoudenysTine DecruyZuzanna ŁukasikSofie Van GassenYvan SaeysAnne HoorensTriana Lobatón OrtegaFilip Van den BoschTom Van de WieleKoen VenkenDirk Elewaut et al.

A1 Journal Article in ARTHRITIS & RHEUMATOLOGY

Distinct immune modulatory roles of regulatory T cells in gut versus joint inflammation in TNF-driven spondyloarthritis

Koen VenkenMatthias JarlborgTine DecruyCéline MortierCarolien VliegheElisabeth GilisAnn-Sophie De CraemerJulie CoudenysIsabelle CambréDevan FleuryAlexander KlimowiczFilip Van den BoschAnne HoorensTriana Lobatón OrtegaSytze de RoockTim SparwasserGerald NaboznyPeggy JacquesDirk Elewaut et al.

A1 Journal Article in ANNALS OF THE RHEUMATIC DISEASES

Studying the pre-implantation uterine microbiota in cattle using transabdominal laparoscopic low-volume lavage : aiming for zero-contamination

Leen LietaerOsvaldo Américo Bogado PascottiniTim LacoereFrederiek-Maarten KerckhofAnn MartensTom Van de WieleGeert Opsomer

A1 Journal Article in JOURNAL OF MICROBIOLOGICAL METHODS