Code
01CD17423
Duration
14 April 2024 → 13 October 2024
Funding
Regional and community funding: Special Research Fund
Promotor
Fellow
Research disciplines
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Natural sciences
- Analysis of next-generation sequence data
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Medical and health sciences
- Computational transcriptomics and epigenomics
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Agricultural and food sciences
- Agricultural plant protection
Keywords
Tetranychus urticae
genotype-environment interactions
host plant adaptation
eQTL scanning
Project description
Aiming to unravel genetic mechanisms underlying the polyphagous two-spotted spider mite ’s unique host adaptation ability, an experimental ‘pseudo-panmictic’ population was created to: (i) Uncover eQTLs (mainly trans) linked to a host shift, relying on predominantly RNA-seq (ii) Examine genotype-environment interactions in different hosts (iii) Study genetic selection for/against relevant genotypes identified in (i) and (ii) caused by a new host