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Researcher
Annemieke Madder
Profile
Projects
Publications & Research Data
Activities
Awards & Distinctions
Patents
342
Results
2026
Higher-level structural classification of pseudomonas cyclic lipopeptides through their bioactive conformation
Benjámin Kovács
Durga Prasad
Vic De Roo
Matthias Vanheede
Penthip Muangkaew
Annemieke Madder
Monica Höfte
Rene De Mot
Niels Geudens
José Martins
A1
Journal Article
in
ADVANCED SCIENCE
2026
2025
A short amphipathic peptide-based injectable hydrogel with antibacterial properties
Dorien Aerssens
Atiruj Theppawong
Hue Vu
Petra Rigole
Marleen Van Troys
Tom Coenye
Richard Hoogenboom
Steven Ballet
Charlotte Martin
Annemieke Madder
A1
Journal Article
in
RSC ADVANCES
2025
Development of 'furan warhead'-equipped antagonistic nanobodies for covalent cross-linking to the epidermal growth factor receptor
Laure Tack
Laia Miret Casals
Olivier Zwaenepoel
Enrico Cadoni
Marleen Van Troys
Jan Gettemans
Annemieke Madder
A1
Journal Article
in
BIOCONJUGATE CHEMISTRY
2025
Development of a His-Tag-mediated pull-down and quantification assay for G-quadruplex containing DNA sequences
Enrico Cadoni
Hanne Moerman
Annemieke Madder
A2
Journal Article
in
RSC CHEMICAL BIOLOGY
2025
Linking the Worlds – Novel Approaches towards Functional Oligonucleotide Conjugates
Jan H. Meffert
Annemieke Madder
Dissertation
2025
Locking up G-quadruplexes with light-triggered staples leads to increased topological, thermodynamic, and metabolic stability
Jack Barr
Enrico Cadoni
Sofie Schellinck
Emiliano Laudadio
José Martins
Annemieke Madder
A1
Journal Article
in
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2025
Non-enzymatic isothermal strand displacement and amplification (NISDA) does not enable sensitive nucleic acid quantification
Thijs Van der Snickt
Scott Ailliet
Simone Bassini
Anouk Peymen
Ahmet Colaker
Enrico Cadoni
Alejandro Valverde
Elise Daems
Annemieke Madder
Karolien De Wael
et al.
Preprint
2025
Peptide hydrogels as slow-release formulations of protein therapeutics : case study of asparaginase-loaded hydrogels
Hue Vu
Evelien Peeters
Kenneth Hofkens
Katrien Vandemeulebroecke
Sara T'Sas
Charlotte Martin
Steven Ballet
Richard Hoogenboom
Steven Goossens
Tim Lammens
et al.
A1
Journal Article
in
BIOMATERIALS SCIENCE
2025
Profiling the cellular surfaceome by furan-based protein biotinylation
Maria Fernandez Fernandez
Laia Miret Casals
Annemieke Madder
Kris Gevaert
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2025
Target, trigger, deliver : biochemical tools to modulate quadruplex nucleic acid structures
Lessandro De Paepe
Annemieke Madder
Koen Raemdonck
Enrico Cadoni
Dissertation
2025
Thiol-thiol cross-clicking using bromo-ynone reagents
Marvin Nicque
Jan H. Meffert
Diederick Maes
Kevin Bevernaege
Mehwish Iftikhar
Olivier Zwaenepoel
Jan Gettemans
Annemieke Madder
Johan Winne
A1
Journal Article
in
NATURE COMMUNICATIONS
2025
Vitamin B12 functionalized with hydroxy-pyrrol-2-one linkers
Mateusz Woźny
Monica Fresta
Jan H. Meffert
Annemieke Madder
Dorota Gryko
A1
Journal Article
in
JOURNAL OF PORPHYRINS AND PHTHALOCYANINES
2025
2024
Breaking cycles : saponification‐enhanced NMR fingerprint matching for the identification and stereochemical evaluation of cyclic lipodepsipeptides from natural sources
Penthip Muangkaew
Durga Prasad
Vic De Roo
Yentl Verleysen
Lu Zhou
René De Mot
Monica Höfte
Annemieke Madder
Niels Geudens
José Martins
A1
Journal Article
in
CHEMISTRY-A EUROPEAN JOURNAL
2024
Exploiting G-quadruplex-DNA damage as a tool to quantify singlet oxygen production
Lessandro De Paepe
Annemieke Madder
Enrico Cadoni
A1
Journal Article
in
SMALL METHODS
2024
Exploiting the covalent triazolinedione and furan chemistry toolbox for labelling, crosslinking and degradation of proteins
Laure Tack
Annemieke Madder
Jan Gettemans
Marleen Van Troys
Laia Miret Casals
Dissertation
2024
Sustained release of a human PD-L1 single-domain antibody using peptide-based hydrogels
Julie Heremans
Robin Maximilian Awad
Jessica Bridoux
Thomas Ertveldt
Vicky Caveliers
Annemieke Madder
Richard Hoogenboom
Nick Devoogdt
Steven Ballet
Sophie Hernot
et al.
A1
Journal Article
in
EUROPEAN JOURNAL OF PHARMACEUTICS AND BIOPHARMACEUTICS
2024
Synthesis and optimization of stapled DOCK peptides with improved drug-like properties
Atiruj Theppawong
Ewout De Geyter
Annemieke Madder
A1
Journal Article
in
ARKIVOC
2024
Time-resolved fluorescence of tryptophan characterizes membrane perturbation by cyclic lipopeptides
Iulia Carabadjac
Jessica Steigenberger
Niels Geudens
Vic De Roo
Penthip Muangkaew
Annemieke Madder
José Martins
Heiko Heerklotz
A1
Journal Article
in
BIOPHYSICAL JOURNAL
2024
Unravelling the secrets of aptamer−small molecule complexes with NMR spectroscopy : the TESS.1 aptamer case
Sofie Schellinck
José Martins
Annemieke Madder
Dissertation
2024
2023
A red light-triggered chemical tool for sequence-specific alkylation of G-quadruplex and I-motif DNA
Enrico Cadoni
Lessandro De Paepe
Gertjan Colpaert
Ruben Tack
Dries Waegeman
Alex Manicardi
Annemieke Madder
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2023
Acid‐resistant BODIPY amino acids for peptide‐based fluorescence imaging of GPR54 receptors in pancreatic islets
Lorena Mendive-Tapia
Laia Miret Casals
Nicole Barth
Jinling Wang
Anne de Bray
Massimiliano Beltramo
Vincent Robert
Christophe Ampe
David Hodson
Annemieke Madder
et al.
A1
Journal Article
in
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2023
Cell surface biotinylation using furan cross-linking chemistry
Maria Fernandez Fernandez
Laia Miret Casals
Annemieke Madder
Kris Gevaert
Bookchapter
in
Mass spectrometry-based proteomics
2023
Complex electrostatic effects on the selectivity of membrane-permeabilizing cyclic lipopeptides
Jessica Steigenberger
Yentl Verleysen
Niels Geudens
Annemieke Madder
José Martins
Heiko Heerklotz
A1
Journal Article
in
BIOPHYSICAL JOURNAL
2023
Development of teixobactin analogues containing hydrophobic, non-proteogenic amino acids that are highly potent against multidrug-resistant bacteria and biofilms
Anish Parmar
Rajamani Lakshminarayanan
Abhishek Iyer
Eunice Tze Leng Goh
Tsz Ying To
Joey Kuok Hoong Yam
Liang Yang
Enas Newire
Maria C. Robertson
Stephen H. Prior
et al.
A1
Journal Article
in
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY
2023
Furan-based (photo)oxidation reactions and their application in nucleic acid and protein targeting
Jack Barr
Gertjan Colpaert
Enrico Cadoni
Annemieke Madder
A1
Journal Article
in
METHODS
2023
Furan-modified PNA probes for covalent targeting and ligation of nucleic acids
Lessandro De Paepe
Enrico Cadoni
Alex Manicardi
Annemieke Madder
A1
Journal Article
in
METHODS
2023
Host miRNAs as biomarkers of SARS-CoV-2 infection : a critical review
Kato Pollet
Nathalie Garnier
Sabine Szunerits
Annemieke Madder
Didier Hober
Ilka Engelmann
A2
Journal Article
in
SENSORS & DIAGNOSTICS
2023
Photo-induced crosslinking uncovers an antiparallel strand orientation in heterodimeric (EIAALEK)(3)/(KIAALKE)(3) and (EIAALEK)(3)/(RIAALRE)(3) coiled-coil systems
Dorien Aerssens
Laia Miret Casals
D. Gomez
D. Sousa-Neves
Y. Levy
M. De Vleesschouwer
Alex Manicardi
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2023
Proximity-induced ligation and one-pot macrocyclization of 1,4-diketone-tagged peptides derived from 2,5-disubstituted furans upon release from the solid support
Alex Manicardi
Atiruj Theppawong
Marleen Van Troys
Annemieke Madder
A1
Journal Article
in
ORGANIC LETTERS
2023
Smart hydrogels delivered by high pressure aerosolization can prevent peritoneal adhesions
Helena Braet
Peter-Paul Fransen
Yong Chen
Simon Van Herck
Remco Mariën
Valérie Vanhoorne
Wim Ceelen
Annemieke Madder
Steven Ballet
Richard Hoogenboom
et al.
A1
Journal Article
in
JOURNAL OF CONTROLLED RELEASE
2023
Stereomeric lipopeptides from a single non-ribosomal peptide synthetase as an additional source of structural and functional diversification in pseudomonas lipopeptide biosynthesis
Penthip Muangkaew
Vic De Roo
Lu Zhou
Léa Girard
Catherine Cesa-Luna
Monica Höfte
René De Mot
Annemieke Madder
Niels Geudens
José Martins
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2023
Structural insight in an aptamer-small molecule complex using NMR spectroscopy : the TESS.1_s_mod case
Sofie Schellinck
Nataša Medved
Dieter Buyst
Annemieke Madder
Karolien De Wael
Janez Plavec
José Martins
P1
Conference
2023
Unlocking the secrets of aptamer-small molecule complexes through NMR spectroscopy
Sofie Schellinck
Nataša Medved
Dieter Buyst
Karolien De Wael
Annemieke Madder
Janez Plavec
José Martins
C3
Conference
2023
Unravelling the secrets of an aptamer-small molecule complex using NMR spectroscopy : the case of the testosterone binding TESS.1 aptamer
Sofie Schellinck
Nataša Medved
Dieter Buyst
Annemieke Madder
Karolien De Wael
Janez Plavec
José Martins
C3
Conference
2023
2022
A photosensitized singlet oxygen ( 1 O 2) toolbox for bio-organic applications : tailoring 1 O 2 generation for DNA and protein labelling, targeting and biosensing
Dorien Aerssens
Enrico Cadoni
Laure Tack
Annemieke Madder
A1
Journal Article
in
MOLECULES
2022
An nuclear magnetic resonance fingerprint matching approach for the identification and structural re-evaluation of Pseudomonas lipopeptides
Vic De Roo
Yentl Verleysen
Benjámin Kovács
Matthias De Vleeschouwer
Penthip Muangkaew
Léa Girard
Monica Höfte
René De Mot
Annemieke Madder
Niels Geudens
et al.
A1
Journal Article
in
MICROBIOLOGY SPECTRUM
2022
Creating clarity in the structural diversity of Pseudomonas lipopeptides and in their associated membrane perturbing effect
Vic De Roo
José Martins
Annemieke Madder
Dissertation
2022
Enlarging the toolbox for cysteine selective protein modification
Ewout De Geyter
Annemieke Madder
Dissertation
2022
Equipping coiled-coil peptide dimers with furan warheads reveals novel cross-link partners
Laia Miret Casals
Sander Van De Putte
Dorien Aerssens
Julien Diharce
Pascal Bonnet
Annemieke Madder
A1
Journal Article
in
FRONTIERS IN CHEMISTRY
2022
GlyConnect-Ugi : site-selective, multi-component glycoprotein conjugations through GlycoDelete expressed glycans
Karel Thooft
Wander Van Breedam
Francis Santens
Elise Wyseure
Sandrine Vanmarcke
Simon Devos
Nico Callewaert
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2022
Impact of doubling peptide length on in vivo hydrogel stability and sustained drug release
Julie Heremans
Lucie Chevillard
Morgane Mannes
Jessica Mangialetto
Kaat Leroy
Jacinta F. White
Arthur Lamouroux
Mathieu Vinken
James Gardiner
Bruno Van Mele
et al.
A1
Journal Article
in
JOURNAL OF CONTROLLED RELEASE
2022
Investigation by NMR spectroscopy of a structure-switching aptamer, the case of the testosterone binding TESS.1 aptamer
Sofie Schellinck
Dieter Buyst
Annemieke Madder
Karolien De Wael
José Martins
C3
Conference
2022
NMR investigation of an aptamer-small molecule complex, the case of the testosterone binding TESS.1 aptamer
Sofie Schellinck
Dieter Buyst
Karolien De Wael
Annemieke Madder
José Martins
C3
Conference
2022
Novel electrochemiluminescent assay for the aptamer-based detection of testosterone
Rocio Canovas
Elise Daems
Rui Campos
Sofie Schellinck
Annemieke Madder
José Martins
Frank Sobott
Karolien De Wael
A1
Journal Article
in
TALANTA
2022
Synthesis and structure-activity relationship of peptide nucleic acid probes with improved interstrand-crosslinking abilities: application to biotin-mediated RNA-pulldown
Enrico Cadoni
Francesca Pennati
Penthip Muangkaew
Joke Elskens
Annemieke Madder
Alex Manicardi
A2
Journal Article
in
RSC CHEMICAL BIOLOGY
2022
Towards a molecular understanding of the membrane altering properties of viscosin, a cyclic lipodepsipeptide
Vic De Roo
Niels Geudens
Yentl Verleysen
Tzong Hsien Lee
Annemieke Madder
Marie-Isabel Aguilar
José Martins
C3
Conference
2022
Triazolinedione protein modification : from an overlooked off-target effect to a tryptophan-based bioconjugation strategy
Klaas Decoene
Kamil Ünal
An Staes
Olivier Zwaenepoel
Jan Gettemans
Kris Gevaert
Johan Winne
Annemieke Madder
A1
Journal Article
in
CHEMICAL SCIENCE
2022
2021
5-Hydroxy-pyrrolone based building blocks as maleimide alternatives for protein bioconjugation and single-site multi-functionalization
Ewout De Geyter
Eirini Antonatou
Dimitris Kalaitzakis
Sabina Smolen
Abhishek Iyer
Laure Tack
Emiel Ongenae
Georgios Vassilikogiannakis
Annemieke Madder
A1
Journal Article
in
CHEMICAL SCIENCE
2021
A tale of furan and nucleic acids : the exploration of furan chemistry as a versatile tool for targeting oligonucleotides
Enrico Cadoni
Annemieke Madder
Alex Manicardi
Dissertation
2021
An integrated approach towards increasing aptamer robustness by incorporation of an imidazolium modified thymine
Anne-Mare de Vries
José Martins
Annemieke Madder
Dissertation
2021
Bacillus cereus food intoxication and toxicoinfection
Jelena Jovanovic
Vincent Ornelis
Annemieke Madder
Andreja Rajkovic
A1
Journal Article
in
COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY
2021
Beyond small molecules : targeting G-quadruplex structures with oligonucleotides and their analogues
Enrico Cadoni
Lessandro De Paepe
Alex Manicardi
Annemieke Madder
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2021
Crosslinker-modified nucleic acid probes for improved target identification and biomarker detection
Joke Elskens
Annemieke Madder
A2
Journal Article
in
RSC CHEMICAL BIOLOGY
2021
Developing furan and triazolinedione chemistries for site-selective protein modification
Klaas Decoene
Annemieke Madder
Jan Gettemans
Dissertation
2021
Exploitation of nucleic acid crosslinking approaches for improved RNA capture and aptamer stabilization
Joke Elskens
Annemieke Madder
Alex Manicardi
Dissertation
2021
Furan warheads for covalent trapping of weak protein-protein interactions : cross-linking of thymosin β4 to actin
Laia Miret Casals
Willem Vannecke
Kurt Hoogewijs
Gianluca Arauz-Garofalo
Marina Gay
Mireia Diaz-Lobo
Marta Vilaseca
Christophe Ampe
Marleen Van Troys
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2021
GlyConnect : exploring glycan-based conjugation chemistries for GLycoDelete proteins
Karel Thooft
Annemieke Madder
Nico Callewaert
Wander Van Breedam
Dissertation
2021
Hydrolysis of 5-methylfuran-2-yl to 2,5-dioxopentanyl allows for stable bio-orthogonal proximity-induced ligation
Alex Manicardi
Enrico Cadoni
Annemieke Madder
A1
Journal Article
in
COMMUNICATIONS CHEMISTRY
2021
New cysteine-analogue strategies for bioengineered peptide stapling and helical stabilization
Atiruj Theppawong
Annemieke Madder
C3
Conference
2021
Pseudomonas cyclic lipopeptides as cytotoxic agents for cancer cells : structure-function analysis
Yentl Verleysen
José Martins
Annemieke Madder
Marleen Van Troys
Dissertation
2021
Teaching photosensitizers a new trick : red light-triggered G-quadruplex alkylation by ligand co-localization
Enrico Cadoni
Alex Manicardi
Mathieu Fossepre
Kaat Heirwegh
Mathieu Surin
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2021
Towards a better understanding of the underlying molecular mechanisms during an aptamer-target interaction, an NMR analysis of TESS.1
Sofie Schellinck
Anne-Mare de Vries
Dieter Buyst
Rocío Cánovas
Elise Daems
Karolien De Wael
Annemieke Madder
José Martins
C3
Conference
2021
Towards the understanding of halogenation in peptide hydrogels : a quantum chemical approach
Tom Bettens
Valentin Lacanau
Ruben Van Lommel
Tess De Maeseneer
Wouter Vandeplassche
Jolien Bertouille
Joost Brancart
Thomas M. A. Barlow
Tatiana Woller
Niko Van den Brande
et al.
A2
Journal Article
in
MATERIALS ADVANCES
2021
2020
A journey towards the development of synthetic receptors for the ionophoric food-borne toxins beauvericin, enniatins and cereulide : setting sail to possible applications
Vincent Ornelis
Annemieke Madder
Andreja Rajkovic
Dissertation
2020
Chemical modification of aptamers for increased binding affinity in diagnostic applications : current status and future prospects
Jan Elskens
Joke Elskens
Annemieke Madder
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2020
Detection of toxins involved in foodborne diseases caused by Gram-positive bacteria
Andreja Rajkovic
Jelena Jovanovic
Silvia Monteiro
Marlies Decleer
Mirjana Andjelkovic
Astrid Foubert
Natalia Beloglazova
Varvara Tsilla
Benedikt Sas
Annemieke Madder
et al.
A1
Journal Article
in
COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY
2020
Do aptamers always bind? : the need for a multifaceted analytical approach when remonstrating binding affinity between aptamer and low molecular weight compounds
Fabio Bottari
Elise Daems
Anne-Mare de Vries
Pieter Van Wielendaele
Stanislav Trashin
Ronny Blust
Frank Sobott
Annemieke Madder
José Martins
Karolien De Wael
A1
Journal Article
in
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
2020
Expanding the toolbox : use of biosensing technology to elucidate the mode of action of cyclic lipodepsipeptides
Vic De Roo
Yentl Verleysen
Tzong-Hsien Lee
Annemieke Madder
Marie-Isabel Aguilar
José Martins
C3
Conference
2020
Exploiting double exchange Diels-Alder cycloadditions for immobilization of peptide nucleic acids on gold nanoparticles
Enrico Cadoni
Daniele Rosa-Gastaldo
Alex Manicardi
Fabrizio Mancin
Annemieke Madder
A1
Journal Article
in
FRONTIERS IN CHEMISTRY
2020
GOLVEN peptide signalling through RGI receptors and MPK6 restricts asymmetric cell division during lateral root initiation
Ana Fernandez Salina
Nick Vangheluwe
Ke Xu
Joris Jourquin
Lucas Alves Neubus Claus
Stefania Morales
Boris Parizot
Hugues De Gernier
Qiaozhi Yu
Andrzej Drozdzecki
et al.
A1
Journal Article
in
NATURE PLANTS
2020
Identification of the molecular determinants involved in antimicrobial activity of pseudodesmin A, a cyclic lipopeptide from the viscosin group
Matthias De Vleeschouwer
Tim Van Kersavond
Yentl Verleysen
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
A1
Journal Article
in
FRONTIERS IN MICROBIOLOGY
2020
Nanobody click chemistry for convenient site-specific fluorescent labelling, single step immunocytochemistry and delivery into living cells by photoporation and live cell imaging
Tim Hebbrecht
Jing Liu
Olivier Zwaenepoel
Gaelle Boddin
Chloé Van Leene
Klaas Decoene
Annemieke Madder
Kevin Braeckmans
Jan Gettemans
A1
Journal Article
in
NEW BIOTECHNOLOGY
2020
PNA-based microRNA detection methodologies
Enrico Cadoni
Alex Manicardi
Annemieke Madder
A1
Journal Article
in
MOLECULES
2020
Untapped opportunities of resin-to-resin transfer reactions (RRTR) for the convergent assembly of multivalent peptide conjugates
Dieter Verzele
Yara Ruiz Garcia
Annemieke Madder
A1
Journal Article
in
CHEMISTRY-A EUROPEAN JOURNAL
2020
Visible-light triggered templated ligation on surface using furan-modified PNAs
Alex Manicardi
Enrico Cadoni
Annemieke Madder
A1
Journal Article
in
CHEMICAL SCIENCE
2020
2019
Counteracting in vitro toxicity of the ionophoric mycotoxin beauvericin : synthetic receptors to the rescue
Vincent Ornelis
Andreja Rajkovic
Marlies Decleer
Benedikt Sas
Sarah De Saeger
Annemieke Madder
A1
Journal Article
in
JOURNAL OF ORGANIC CHEMISTRY
2019
Cyclic lipodepsipeptides across the globe
Niels Geudens
Yentl Verleysen
Benjámin Kovács
René De Mot
Monica Höfte
Annemieke Madder
Vic De Roo
José Martins
C3
Conference
2019
Design and synthesis of cyclic peptide-bile acid conjugates for improving the therapeutic potential of peptide drugs
Dorien Van Lysebetten
Annemieke Madder
Bruno De Geest
Dissertation
2019
Disruption of endocytosis through chemical inhibition of clathrin heavy chain function
Wim Dejonghe
Isha Sharma
Bram Denoo
Steven De Munck
Qing Lu
Kiril Mishev
Haydar Bulut
Evelien Mylle
Riet De Rycke
Mina Vasileva
et al.
A1
Journal Article
in
NATURE CHEMICAL BIOLOGY
2019
Synthetic biomolecules : from blind watchmakers to synthetic biologists
Johan Winne
Annemieke Madder
Editorial material
2019
Teixobactins : a new class of 21st century antibiotics to combat multidrug-resistant bacterial pathogens
Abhishek Iyer
Annemieke Madder
Ishwar Singh
Editorial material
2019
The private life of small molecules : elucidating their molecular mechanisms in plants and in cycloadditions
Bram Denoo
Johan Winne
Annemieke Madder
Dissertation
2019
Thermoresponsive DNA by intercalation of dsDNA with oligoethylene-glycol-functionalized small-molecule intercalators
Debaditya Bera
Lars Verdonck
Mathias Glassner
Annemieke Madder
Richard Hoogenboom
A1
Journal Article
in
MACROMOLECULAR RAPID COMMUNICATIONS
2019
Towards a molecular understanding : real-time quantitative analysis of membrane disturbance caused by cyclic lipopeptides using biosensing technology
Vic De Roo
Yentl Verleysen
Tzong-Hsien Lee
Annemieke Madder
Marie-Isabel Aguilar
José Martins
C3
Conference
2019
2018
A full structure analysis of MDN-0066, a recently described cyclic lipodepsipeptide produced by Pseudomonas sp. bacteria
Vic De Roo
Niels Geudens
Yentl Verleysen
Benjámin Kovács
Feyisara Eyiwumi Oni
Monica Höfte
Annemieke Madder
José Martins
C3
Conference
2018
A thiolactone strategy for straightforward synthesis of disulfide-linked side-chain-to-tail cyclic peptides featuring an N-terminal modification handle
Dorien Van Lysebetten
Stefania Felissati
Eirini Antonatou
Lieselot Carrette
Pieter Espeel
Evelien Focquet
Filip Du Prez
Annemieke Madder
A1
Journal Article
in
CHEMBIOCHEM
2018
An anticaffeine antibody-oligonucleotide conjugate for DNA-directed immobilization in environmental immunoarrays
Ana Margarida Carvalho
Cinthya Veliz Montes
Rudolf J. Schneider
Annemieke Madder
A1
Journal Article
in
LANGMUIR
2018
Biodegradable amphipathic peptide hydrogels as extended-release system for opioid peptides
Charlotte Martin
Maria Dumitrascuta
Morgane Mannes
Aquilino Lantero
Dominik Bucher
Katja Walker
Yannick Van Wanseele
Edith Oyen
Sophie Hernot
Ann Van Eeckhaut
et al.
A1
Journal Article
in
JOURNAL OF MEDICINAL CHEMISTRY
2018
Bottom-up-design of imidazole-modified functional nucleic acids : an integrated approach
Lars Verdonck
Annemieke Madder
José Martins
Dissertation
2018
Concerted biophysical and biological evaluation of Pseudomonas lipopeptides as a premise to unlock their application potential
José Martins
Yentl Verleysen
Benjámin Kovács
Vic De Roo
Christophe Ampe
Annemieke Madder
Marleen Van Troys
Niels Geudens
C3
Conference
2018
Conjugation of antibodies and antibody mimics to oligonucleotides for the design and construction of addressable immunoarrays using DNA-directed immobilisation
Ana Margarida Dias Carvalho Da Rocha
Annemieke Madder
Rudolf Schneider
Dissertation
2018
Cysteines and disulfide-bridged macrocyclic mimics of teixobactin analogues and their antibacterial activity evaluation against methicillin-resistant Staphylococcus aureus (MRSA)
Ruba Malkawi
Abhishek Iyer
Anish Parmar
Daniel G. Lloyd
Eunice Tze Leng Goh
Edward J. Taylor
Sarir Sarmad
Annemieke Madder
Rajamani Lakshminarayanan
Ishwar Singh
A1
Journal Article
in
PHARMACEUTICS
2018
Design and syntheses of highly potent teixobactin analogues against Staphylococcus aureus, methicillin-resistant Staphylococcus aureus (MRSA), vancomycin-resistant Enterococci (VRE) in vitro and in vivo
Anish Parmar
Rajamani Lakshminarayanan
Abhishek Iyer
Venkatesh Mayandi
Eunice Tze Leng Goh
Daniel G Lloyd
Madhavi Latha S Chalasani
Navin Kumar Verma
Stephen H Prior
Roger W Beuerman
et al.
A1
Journal Article
in
JOURNAL OF MEDICINAL CHEMISTRY
2018
Development of a synthetic receptor for the food toxin beauvericin : a tale of carbazole and steroids
Vincent Ornelis
Andreja Rajkovic
Benedikt Sas
Sarah De Saeger
Annemieke Madder
A1
Journal Article
in
ORGANIC LETTERS
2018
Exploration of CLP antitumor potential
Yentl Verleysen
Matthias De Vleeschouwer
Niels Geudens
Marleen Van Troys
Christophe Ampe
Annemieke Madder
José Martins
C3
Conference
2018
Furan-based photooxygenation reactions for peptide labeling and conjugation
Eirini Antonatou
Annemieke Madder
Dissertation
2018
In-depth structural analysis of the ‘conformational change’ of aptamers
Anne-Mare de Vries
Lars Verdonck
Dieter Buyst
Anca Florea
Mats de Jong
Karolien De Wael
Annemieke Madder
José Martins
C3
Conference
2018
Influence of CLP structure on antitumor potential
Yentl Verleysen
Matthias De Vleeschouwer
Niels Geudens
Tim Van Kersavond
Arend Mandelings
Marleen Van Troys
Christophe Ampe
Annemieke Madder
José Martins
C3
Conference
2018
Nonselective chemical inhibition of Sec7 domain-containing ARF GTPase exchange factors
Kiril Mishev
Qing Lu
Bram Denoo
Francois Peurois
Wim Dejonghe
Jan Hullaert
Riet De Rycke
Sjef Boeren
Marine Bretou
Steven De Munck
et al.
A1
Journal Article
in
PLANT CELL
2018
Oxygen consumption rate analysis of mitochondrial dysfunction caused by Bacillus cereus cereulide in Caco-2 and HepG2 cells
Marlies Decleer
Jelena Jovanovic
Anita Vakula
Bozidar Udovicki
Rock-Seth EK Agoua
Annemieke Madder
Sarah De Saeger
Andreja Rajkovic
A1
Journal Article
in
TOXINS
2018
Pyrrole-mediated peptide cyclization identified through genetically reprogrammed peptide synthesis
Klaas Decoene
Willem Vannecke
Toby Passioura
Hiroaki Suga
Annemieke Madder
A1
Journal Article
in
BIOMEDICINES
2018
Reviving old protecting group chemistry for site-selective peptide-protein conjugation
Smita Gunnoo
Abhishek Iyer
Willem Vannecke
Klaas Decoene
Tim Hebbrecht
Jan Gettemans
Mathias Laga
Stefan Loverix
Ignace Lasters
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2018
Templated DNA cross-linking : towards a non-invasive singlet-oxygen-based triggering method
Nathalie De Laet
Eva Marina Llamas Garcinuño
Annemieke Madder
A1
Journal Article
in
CHEMPHOTOCHEM
2018
Tethered imidazole mediated duplex stabilization and its potential for aptamer stabilization
Lars Verdonck
Dieter Buyst
Anne-Mare de Vries
Vicky Gheerardijn
Annemieke Madder
José Martins
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2018
2017
Cross-linking furan-modified kisspeptin-10 to the KISS receptor
Willem Vannecke
Christophe Ampe
Marleen Van Troys
Massimiliano Beltramo
Annemieke Madder
A1
Journal Article
in
ACS CHEMICAL BIOLOGY
2017
Crosslinking furan-modified peptides to their target : towards a new receptor identification strategy
Willem Vannecke
Annemieke Madder
Christophe Ampe
Dissertation
2017
Decoration of trastuzumab with short oligonucleotides : synthesis and detailed characterization
Ana Margarida Dias Carvalho Da Rocha
Alex Manicardi
C Véliz Montes
Smita Gunnoo
RJ Schneider
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2017
Defining the molecular structure of teixobactin analogues and understanding their role in antibacterial activities
Anish Parmar
Stephen H Prior
Abhishek Iyer
Charlotte S Vincent
Dorien Van Lysebetten
Eefjan Breukink
Annemieke Madder
Edward J Taylor
Ishwar Singh
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2017
Development of photosensitiser conjugates for furan-oxidation based interstrand crosslinking to nucleic acids
Eva Marina Llamas Garcinuño
Annemieke Madder
Tomás Torres
Dissertation
2017
Impact of microbial depsipeptide cereulide on mitochondrial disruptions in CACO2, HEPRG and HPG2 cells as a measurement of host-pathogen interactions
Andreja Rajkovic
Marlies Decleer
Benedikt Sas
Annemieke Madder
Sarah De Saeger
C3
Conference
2017
In vivo imaging of the stability and sustained cargo release of an injectable amphipathic peptide-based hydrogel
Edith Oyen
Charlotte Martin
Vicky Caveliers
Annemieke Madder
Bruno Van Mele
Richard Hoogenboom
Sophie Hemot
Steven Ballet
A1
Journal Article
in
BIOMACROMOLECULES
2017
Injectable peptide-based hydrogel formulations for the extended in vivo release of opioids
Charlotte Martin
Edith Oyen
Yannick Van Wanseele
Tanila Ben Haddou
Helmut Schmidhammer
Jessica Andrade
Lynne Waddington
Ann Van Eeckhaut
Bruno Van Mele
James Gardiner
et al.
A2
Journal Article
in
MATERIALS TODAY CHEMISTRY
2017
Photoinduced cross-linking of short furan-modified DNA on surfaces
Cinthya Véliz Montes
Henry Memczak
Ellen Gyssels
Tomás Torres
Annemieke Madder
Rudolf J Schneider
A1
Journal Article
in
LANGMUIR
2017
Polyoxometalates as inorganic amino acids for biomedical applications
Ken Princen
Anna Kaczmarek
Annemieke Madder
Rik Van Deun
Kristof Van Hecke
C3
Conference
2017
Polyoxometalates for (bio-)conjugation
Ken Princen
Anna Kaczmarek
Rik Van Deun
Annemieke Madder
Kristof Van Hecke
C3
Conference
2017
Porphyrin-based photosensitizers and their DNA conjugates for singlet oxygen induced nucleic acid interstrand crosslinking
Eva Marina Llamas Garcinuño
João Tomé
João MM Rodrigues
Tomas Torres
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2017
Singlet oxygen-mediated one-pot chemoselective peptide-peptide ligation
Eirini Antonatou
Yentl Verleysen
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2017
Site-selective peptide and protein labelling & crosslinking
Eirini Antonatou
Smita Gunnoo
Willem Vannecke
Annemieke Madder
Bookchapter
in
Amino acids, peptides and proteins, vol. 41
2017
Specific dsDNA recognition by a mimic of the DNA binding domain of the c-Myc/Max transcription factor
Yara Ruiz Garcia
Y Vladimir Pabon-Martinez
CI Edvard Smith
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2017
Syntheses of potent teixobactin analogues against methicillin-resistant Staphylococcus aureus (MRSA) through the replacement of L-allo-enduracididine with its isosteres
Anish Parmar
Abhishek Iyer
Daniel G Lloyd
Charlotte S Vincent
Stephen H Prior
Annemieke Madder
Edward J Taylor
Ishwar Singh
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2017
Synthesis and improved cross-linking properties of C5-modified furan bearing PNAs
Joke Elskens
Alex Manicardi
Valentina Costi
Annemieke Madder
Roberto Corradini
A1
Journal Article
in
MOLECULES
2017
Synthesis of N-methylated pseudodesmin A analogues : on the structural importance of N-H hydrogen bonds
Matthias De Vleeschouwer
Davy Sinnaeve
Nele Matthijs
Tom Coenye
Annemieke Madder
José Martins
A1
Journal Article
in
CHEMISTRYSELECT
2017
Synthetic protocol for AFCS : a biologically active fluorescent castasterone analog conjugated to an Alexa Fluor 647 dye
Johan Winne
Niloufer Irani
Jos Van den Begin
Annemieke Madder
Bookchapter
in
Brassinosteroids : methods and protocols
2017
Teixobactin analogues reveal enduracididine to be non-essential for highly potent antibacterial activity and lipid II binding
Anish Parmar
Abhishek Iyer
Stephen H Prior
Daniel G Lloyd
Eunice Tze Leng Goh
Charlotte S Vincent
Timea Palmai-Pallag
Csanad Z Bachrati
Eefjan Breukink
Annemieke Madder
et al.
A1
Journal Article
in
CHEMICAL SCIENCE
2017
The impact of the local DNA base pair context on the stabilizing interactions of an imidazolium modified thymine
Anne-Mare de Vries
Dieter Buyst
Lars Verdonck
Annemieke Madder
José Martins
C3
Conference
2017
Visible-light-mediated selective arylation of cysteine in batch and flow
Cecilia Bottecchia
Maarten Rubens
Smita B Gunnoo
Volker Hessel
Annemieke Madder
Timothy Noël
A1
Journal Article
in
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2017
2016
Automated synthesis of monodisperse oligomers, featuring sequence control and tailored functionalization
Steven Martens
Jos Van den Begin
Annemieke Madder
Filip Du Prez
Pieter Espeel
A1
Journal Article
in
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
2016
Beyond the test tube : expanding furan mediated nucleic acid cross-linking to a cellular context
Nathalie De Laet
Annemieke Madder
Dissertation
2016
Bioconjugation of quantum dots : review & impact on future application
Astrid Foubert
Natalia Beloglazova
Andreja Rajkovic
Benedikt Sas
Annemieke Madder
Irina Yu Goryacheva
Sarah De Saeger
A1
Journal Article
in
TRAC-TRENDS IN ANALYTICAL CHEMISTRY
2016
Bioconjugation: using selective chemistry to enhance the properties of proteins and peptides as therapeutics and carriers
Smita Gunnoo
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2016
Chemical protein modification through cysteine
Smita B Gunnoo
Annemieke Madder
A1
Journal Article
in
CHEMBIOCHEM
2016
Controlled-release of opioids for improved pain management
Charlotte Martin
Andy De Baerdemaeker
Jan Poelaert
Annemieke Madder
Richard Hoogenboom
Steven Ballet
A1
Journal Article
in
MATERIALS TODAY
2016
Cyclisation of peptides via a thiolactone strategy
Dorien Van Lysebetten
Stefania Felissati
Evelien Focquet
Y Abdhouni
Pieter Espeel
Lieselot Carrette
Filip Du Prez
Annemieke Madder
C3
Conference
2016
Danger-associated peptide signaling in Arabidopsis requires clathrin
Fausto Andres Ortiz Morea
Daniel Savatin
Wim Dejonghe
Rahul Kumar
Yu Luo
Maciej Adamowski
Jos Van den Begin
Keini Dressano
Guilherme Oliveira
Xiuyang Zhao
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2016
Development and validation of ultra-high-performance liquid chromatography-tandem mass spectrometry methods for the simultaneous determination of beauvericin, enniatins (A, A1, B, B1) and cereulide in maize, wheat, pasta and rice
Marlies Decleer
Andreja Rajkovic
Benedikt Sas
Annemieke Madder
Sarah De Saeger
A1
Journal Article
in
JOURNAL OF CHROMATOGRAPHY A
2016
DNA recognition and antimicrobial compounds : exploring the versatility of peptides
Abhishek Iyer
Annemieke Madder
Ishwar Singh
Dissertation
2016
Efficient total syntheses and biological activities of two teixobactin analogues
Anish Parmar
Abhishek Iyer
Charlotte S Vincent
Dorien Van Lysebetten
Stephen H Prior
Annemieke Madder
Edward J Taylor
Ishwar Singh
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2016
Expanding furan based nucleic acid cross-linking towards new applications
Ellen Gyssels
Annemieke Madder
Dissertation
2016
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2016
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2016
First total synthesis of WLIP: on the importance of correct protecting group choice
Matthias De Vleeschouwer
José Martins
Annemieke Madder
A1
Journal Article
in
JOURNAL OF PEPTIDE SCIENCE
2016
Furan oxidation based cross-linking: a new approach for the study and targeting of nucleic acid and protein interactions
Lieselot LG Carrette
Ellen Gyssels
Nathalie De Laet
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2016
Furan-based crosslinking in situ : seizing ligand-receptor complexes in the act
Willem Vannecke
Christophe Ampe
Marleen Van Troys
Annemieke Madder
C3
Conference
2016
Furan-PNA : a mildly inducible irreversible interstrand crosslinking system targeting single and double stranded DNA
Alex Manicardi
Ellen Gyssels
Roberto Corradini
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2016
Injectable peptide hydrogels for controlled drug release
E Oyen
C Martin
S Hernot
J Gardiner
B Van Mele
Annemieke Madder
Richard Hoogenboom
M Spetea
S Ballet
C3
Conference
2016
Injectable peptide hydrogels for controlled-release of opioids
Charlotte Martin
Edith Oyen
Jeroen Mangelschots
Mathieu Bibian
Tanila Ben Haddou
Jessica Andrade
James Gardiner
Bruno Van Mele
Annemieke Madder
Richard Hoogenboom
et al.
A1
Journal Article
in
MEDCHEMCOMM
2016
Mixed α/β-peptides as a class of short amphipathic peptide hydrogelators with enhanced proteolytic stability
Jeroen Mangelschots
Mathieu Bibian
James Gardiner
Lynne Waddington
Yannick Van Wanseele
Ann Van Eeckhaut
Maria M Diaz Acevedo
Bruno Van Mele
Annemieke Madder
Richard Hoogenboom
et al.
A1
Journal Article
in
BIOMACROMOLECULES
2016
Singlet oxygen-induced furan oxidation for site-specific and chemoselective peptide ligation
Eirini Antonatou
Kurt Hoogewijs
Dimitris Kalaitzakis
Andreas Baudot
Georgios Vassilikogiannakis
Annemieke Madder
A1
Journal Article
in
CHEMISTRY-A EUROPEAN JOURNAL
2016
Synthesis and evaluation of methylene blue oligonucleotide conjugates for DNA interstrand cross-linking
Nathalie De Laet
Annemieke Madder
A1
Journal Article
in
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY
2016
The SBT6.1 subtilase processes the GOLVEN1 peptide controlling cell elongation
Sarieh Ghorbani
Kurt Hoogewijs
Tamara Pecenkova
Ana Fernandez Salina
Annelies Inzé
Dominique Eeckhout
Dorota Kawa
Geert De Jaeger
Tom Beeckman
Annemieke Madder
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2016
2015
Cyclodextrin-peptide conjugates for sequence specific DNA binding
Yara Ruiz Garcia
Jan Zelenka
Y Vladimir Pabon
Abhishek Iyer
Miloš Buděšínský
Tomáš Kraus
CI Edvard Smith
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2015
Design and systematic study of imidazole based DNAzymes : an integrated NMR and molecular dynamics approach
Dieter Buyst
José Martins
Annemieke Madder
Dissertation
2015
Exploration of the structure-activity relationship of the cyclic lipopeptide pseudodesmin A enabled by an effective and versatile synthesis route
Matthias De Vleeschouwer
Annemieke Madder
José Martins
Dissertation
2015
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification and NMR investigation
Matthias De Vleeschouwer
Davy Sinnaeve
Nele Matthijs
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2015
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification and NMR investigation
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2015
Hyphenation of a deoxyribonuclease I immobilized enzyme reactor with liquid chromatography for the online stability evaluation of oligonucleotides
Piotr Wiktor Alvarez Porebski
Ellen Gyssels
Annemieke Madder
Frederic Lynen
A1
Journal Article
in
JOURNAL OF CHROMATOGRAPHY A
2015
Identification of a pKa-regulating motif stabilizing imidazole-modified double-stranded DNA
Dieter Buyst
Vicky Gheerardijn
Krisztina Fehér
Björn Van Gasse
Jos Van den Begin
José Martins
Annemieke Madder
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2015
Rational design of a hexapeptide hydrogelator for controlled-release drug delivery
Mathieu Bibian
Jeroen Mangelschots
James Gardiner
Lynne Waddington
Maria M Diaz Acevedo
Bruno De Geest
Bruno Van Mele
Annemieke Madder
Richard Hoogenboom
Sam Ballet
A1
Journal Article
in
JOURNAL OF MATERIALS CHEMISTRY B
2015
Sequence-selective DNA recognition and enhanced cellular up-take by peptide–steroid conjugates
Yara Ruiz Garcia
Abhishek Iyer
Dorien Van Lysebetten
Y Vladimir Pabon
Benoit Louage
Malgorzata Honcharenko
Bruno De Geest
CI Edvard Smith
Roger Strömberg
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2015
Singlet oxygen triggered cross-linking of DNA
Nathalie De Laet
Annemieke Madder
C3
Conference
2015
Stapling monomeric GCN4 peptides allows for DNA binding and enhanced cellular uptake
Abhishek Iyer
Dorien Van Lysebetten
Yara Ruiz Garcia
Benoit Louage
Bruno De Geest
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2015
The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation
Ana Fernandez Salina
Andrzej Drozdzecki
Kurt Hoogewijs
Valya Vassileva
Annemieke Madder
Tom Beeckman
Pierre Hilson
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2015
Towards DNA based esterases: uncovering Hoogsteen face regulation of the pKaH of a tethered imidazole functionality by NMR and molecular dynamics
Dieter Buyst
Vicky Gheerardijn
Björn Van Gasse
Jos Van den Begin
Annemieke Madder
José Martins
C3
Conference
2015
Triplex crosslinking through furan oxidation requires perturbation of the structured triple-helix
Ellen Gyssels
Lieselot LG Carrette
Emma Vercruysse
Kristof Stevens
Annemieke Madder
A1
Journal Article
in
CHEMBIOCHEM
2015
2014
A mildly inducible and selective cross-link methodology for RNA duplexes
Lieselot Carrette
Ellen Gyssels
Joke Loncke
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2014
A synthetic oligonucleotide model for evaluating the oxidation and crosslinking propensities of natural furan-modified DNA
Lieselot Carrette
Annemieke Madder
A1
Journal Article
in
CHEMBIOCHEM
2014
alpha-Helix stabilization of the basic region of the monomeric transcription factor GCN4 using stapled peptides for DNA binding
Abhishek Iyer
Yara Ruiz Garcia
Annemieke Madder
C3
Conference
2014
An immunogen synthesis strategy for the development of specific anti-deoxynivalenol monoclonal antibodies
Melanie Sanders
Yirong Guo
Abhishek Iyer
Yara Ruiz Garcia
Anastasia Galvita
Arne Heyerick
Dieter Deforce
Martijn Risseeuw
Serge Van Calenbergh
Marc Bracke
et al.
A1
Journal Article
in
FOOD ADDITIVES AND CONTAMINANTS PART A-CHEMISTRY ANALYSIS CONTROL EXPOSURE & RISK ASSESSMENT
2014
Cyclic lipodepsipeptides produced by Pseudomonas spp. naturally present in raw milk induce inhibitory effects on microbiological inhibitor assays for antibiotic residue screening
Wim Reybroeck
Matthias De Vleeschouwer
Sophie Marchand
Davy Sinnaeve
Kim Heylen
Jan De Block
Annemieke Madder
José Martins
Marc Heyndrickx
A1
Journal Article
in
PLOS ONE
2014
Exploration of the structure-activity relation of natural, self-assembling cyclic lipodepsipeptides
Niels Geudens
Krisztina Fehér
Matthias De Vleeschouwer
Jean-Marc Crowet
Mehmet Nail Nasir
Hassen Rokni-Zadeh
René De Mot
Annemieke Madder
Laurence Lins
José Martins
et al.
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Davy Sinnaeve
Nele Matthijs
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Davy Sinnaeve
Matthijs Naessens
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Davy Sinnaeve
Nele Matthijs
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification and NMR investigation
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification and NMR investigation
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
Functional nucleic acids as tools in catalysis
Vicky Gheerardijn
Annemieke Madder
Dissertation
2014
Furan oxidation cross-link methodology: towards new approaches in antigene and antisense strategy
Ellen Gyssels
Lieselot Carrette
Joke Loncke
Emma Vercruysse
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2014
Furan oxidation cross-linking: a new chemical approach for the study and targeting of protein and nucleic acids interactions
Ellen Gyssels
Lieselot Carrette
Nathalie De Laet
Kurt Hoogewijs
Eirini Antonatou
Willem Vannecke
Annemieke Madder
C3
Conference
2014
Furan-based reactions for peptide labeling and crosslinking of bioactive peptides
Kurt Hoogewijs
Annemieke Madder
Pierre Hilson
Dissertation
2014
Identification of a pKa-regulating motif stabilizing imidazole modified double stranded DNA
Dieter Buyst
Vicky Gheerardijn
Krisztina Fehér
Björn Van Gasse
Jos Van den Begin
José Martins
Annemieke Madder
C3
Conference
2014
Imidazole containing building blocks for incorporation in oligonucleotides and PNA
Lars Verdonck
Jyotirmoy Maity
Alice Ghidini
Dimitri Honcharenko
Vicky Gheerardijn
Annemieke Madder
Roger Strömberg
C3
Conference
2014
Impact of a stereocentre inversion in cyclic lipodepsipeptides from the viscosin group: a comparative study of the viscosinamide and pseudodesmin conformation and self-assembly
Niels Geudens
Matthias De Vleeschouwer
Krisztina Fehér
Hassan Rokni-Zadeh
Maarten GK Ghequire
Annemieke Madder
René De Mot
José Martins
Davy Sinnaeve
A1
Journal Article
in
CHEMBIOCHEM
2014
Membrane interactions of natural cyclic lipodepsipeptides
Niels Geudens
Krisztina Fehér
Matthias De Vleeschouwer
Jean-Marc Crowet
Mehmet Nail Nasir
Annemieke Madder
Laurence Lins
José Martins
Davy Sinnaeve
C3
Conference
2014
Membrane interactions of natural cyclic lipodepsipeptides
Niels Geudens
Krisztina Fehér
Jean-Marc Crowet
Mehmet Nail Nasir
Annemieke Madder
Laurence Lins
José Martins
Davy Sinnaeve
C3
Conference
2014
Membrane interactions of natural cyclic lipodepsipeptides
Niels Geudens
Krisztina Fehér
Matthias De Vleeschouwer
Jean-Marc Crowet
Mehmet Nail Nasir
Hassan Rokni-Zadeh
René De Mot
Annemieke Madder
Laurence Lins
José Martins
et al.
C3
Conference
2014
Peptide scaffold conjugates as protein mimics for phosphate recognition
Yara Ruiz Garcia
Annemieke Madder
Dissertation
2014
Peptide-DNA interactions : a study using protein models and the furan-oxidation cross-link methodology
Lieselot Carrette
Annemieke Madder
Dissertation
2014
Peptidosteroid tweezers revisited: DNA binding through an optimised design
Lieselot Carrette
Takashi Morii
Annemieke Madder
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2014
Pseudomonas cyclic lipodepsipeptides from the viscosin group: insight into their self-assembly and membrane interaction
Davy Sinnaeve
Matthias De Vleeschouwer
Niels Geudens
Krisztina Fehér
Jean-Marc Crowet
Annemieke Madder
Laurence Lins
José Martins
C3
Conference
2014
Rapid total synthesis of cyclic lipodepsipeptides as a premise to investigate their self-assembly and biological activity
Matthias De Vleeschouwer
Davy Sinnaeve
Jos Van den Begin
Tom Coenye
José Martins
Annemieke Madder
A1
Journal Article
in
CHEMISTRY-A EUROPEAN JOURNAL
2014
Rational design of injectable hexapeptide hydrogelators for controlled-release drug delivery
M Bibian
J Mangelschots
C Martin
J Gardiner
L Waddington
MMD Acevedo
B Van Mele
Annemieke Madder
Richard Hoogenboom
S Ballet
C3
Conference
2014
Self‐assembling cyclic lipodepsipeptides
Davy Sinnaeve
Matthias De Vleeschouwer
Niels Geudens
Jean-Marc Crowet
Annemieke Madder
Laurence Lins
José Martins
C3
Conference
2014
Straightforward synthesis of cholic acid stabilized loop mimetics
An Clemmen
Carlo Boutton
Peter Vanlandschoot
Angela Wittelsberger
Inge Borghmans
Astrid Coppens
Peter Casteels
Annemieke Madder
A1
Journal Article
in
TETRAHEDRON LETTERS
2014
Synthesis of cyclic lipodepsipeptides 'à la carte' and first insights in the structure-activity relationship
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2014
Towards DNA based esterases: uncovering Hoogsteen face regulation of the pKaH of a tethered imidazole functionality by NMR and molecular dynamics
Dieter Buyst
Vicky Gheerardijn
Jos Van den Begin
José Martins
Annemieke Madder
C3
Conference
2014
Towards DNA based esterases: uncovering Hoogsteen face regulation of the pKaH of a tethered imidazole functionality by NMR and molecular dynamics
Dieter Buyst
Vicky Gheerardijn
Björn Van Gasse
Jos Van den Begin
Annemieke Madder
José Martins
C3
Conference
2014
Unravelling the self-assembly of bacterial cyclic lipopeptides by 13C relaxation, PFGSTE and MD simulation studies
Davy Sinnaeve
Matthias De Vleeschouwer
Jean-Marc Crowet
Niels Geudens
Krisztina Fehér
Annemieke Madder
Laurence Lins
José Martins
C3
Conference
2014
Versatile synthesis of amino acid functionalized nucleosides via a domino carboxamidation reaction
Vicky Gheerardijn
Jos Van den Begin
Annemieke Madder
A1
Journal Article
in
BEILSTEIN JOURNAL OF ORGANIC CHEMISTRY
2014
Visible light induced cross-linking of DNA by using multi-functionalized oligonucleotide probes
Nathalie De Laet
Annemieke Madder
C3
Conference
2014
Visible light induced crosslinking of DNA using multifunctionalized oligonucleotide probes
Nathalie De Laet
Annemieke Madder
C3
Conference
2014
Water-soluble NHC-Cu catalysts : applications in click chemistry, bioconjugation and mechanistic analysis
Heriberto Díaz Velázquez
Yara Ruiz Garcia
Matthias Vandichel
Annemieke Madder
Francis Verpoort
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2014
XVIth Symposium on chemistry of nucleic acid components
Vicky Gheerardijn
Annemieke Madder
Editorial material
2014
2013
Accurate prediction of ¹H chemical shifts in interstrand cross-linked DNA
Ewald Pauwels
Diederica Claeys
José Martins
Michel Waroquier
Giuseppe Bifulco
Veronique Van Speybroeck
Annemieke Madder
A1
Journal Article
in
RSC ADVANCES
2013
DNA interstrand cross-link formation using furan as a masked reactive aldehyde
Lieselot Carrette
Ellen Gyssels
Annemieke Madder
Bookchapter
in
Current protocols in nucleic acid chemistry
2013
Exploiting furan’s versatile reactivity in reversible and irreversible orthogonal peptide labeling
Kurt Hoogewijs
Dieter Buyst
Johan Winne
José Martins
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2013
Exploration of the structure-activity relation of natural, self-assembling cyclic lipodepsipeptides
Niels Geudens
Krisztina Fehér
Matthias De Vleeschouwer
Hassan Rokni-Zadeh
René De Mot
Annemieke Madder
José Martins
Davy Sinnaeve
C3
Conference
2013
Exploration of the structure-activity relation of natural, self-assembling cyclic lipodepsipeptides
Niels Geudens
Krisztina Fehér
Matthias De Vleeschouwer
Jean-Marc Crowet
Mehmet Nail Nasir
Hassen Rokni-Zadeh
René De Mot
Annemieke Madder
Laurence Lins
José Martins
et al.
C3
Conference
2013
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2013
First insights in the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification and NMR investigation
Matthias De Vleeschouwer
Nele Matthijs
Davy Sinnaeve
Tom Coenye
José Martins
Annemieke Madder
C3
Conference
2013
Furan oxidation cross-link methodology: towards new approaches in antigene and antisense strategy
Ellen Gyssels
Lieselot Carrette
Joke Loncke
Emma Vercruysse
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2013
Furan oxidation cross-linking: a new approach for the study and targeting of peptide/protein and nucleic acid interactions
Lieselot Carrette
Takashi Morii
Annemieke Madder
C3
Conference
2013
Multifunctionalized sequence-defined oligomers from a single building block
Pieter Espeel
Lieselot Carrette
Katarzyna Bury
Sven Capenberghs
José Martins
Filip Du Prez
Annemieke Madder
A1
Journal Article
in
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2013
Patchwork protein chemistry: a practitioner's treatise on the advances in synthetic peptide stitchery
Dieter Verzele
Annemieke Madder
A1
Journal Article
in
CHEMBIOCHEM
2013
Synthetic progress in cMyc-Max oncoprotein miniaturization: semi-online monitoring gives solid-phase access to hydrophobic b(-HLH-)ZIP peptidosteroid tweezers
Dieter Verzele
Annemieke Madder
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2013
The antimicrobial compound xantholysin defines a new group of Pseudomonas cyclic lipopeptides
Wen Li
Hassan Rokni-Zadeh
Matthias De Vleeschouwer
Maarten GK Ghequire
Davy Sinnaeve
Guan-Lin Xie
Jef Rozenski
Annemieke Madder
José Martins
René De Mot
A1
Journal Article
in
PLOS ONE
2013
Towards DNA based esterases: uncovering Hoogsteen based regulation of the pKa of a tethered imidazole functionality by NMR and molecular dynamics
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Jos Van den Begin
Annemieke Madder
José Martins
C3
Conference
2013
Toxicity inspired cross-linking for probing DNA–peptide interactions
Lieselot Carrette
Takashi Morii
Annemieke Madder
A1
Journal Article
in
BIOCONJUGATE CHEMISTRY
2013
Transcriptional and functional classification of the GOLVEN/ROOT GROWTH FACTOR/CLE-like signaling peptides reveals their role in lateral root and hair formation
Ana Fernandez Salina
Andrzej Drozdzecki
Kurt Hoogewijs
Anh Thu Nguyen
Tom Beeckman
Annemieke Madder
Pierre Hilson
A1
Journal Article
in
PLANT PHYSIOLOGY
2013
Visible light induced crosslinking of DNA using multifunctionalized oligonucleotide probes
Nathalie De Laet
Annemieke Madder
C3
Conference
2013
Xantholysin and promysalin, novel antimicrobial secondary metabolites from Pseudomonas putida rhizosphere isolates
Wen Li
Matthias De Vleeschouwer
Maarten GK Ghequire
Davy Sinnaeve
Hassan Rokni-Zadeh
Annemieke Madder
Jef Rozenski
José Martins
René De Mot
C3
Conference
2013
2012
Aromatic capping surprisingly stabilizes furan moieties in peptides against acidic degradation
Kurt Hoogewijs
Annelies Deceuninck
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2012
Conformational and self-assembly properties of cyclic lipodepsipeptides of the viscosin group
Davy Sinnaeve
Niels Geudens
Matthias De Vleeschouwer
Krisztina Fehér
Hassan Rokni-Zadeh
Jos M Raaijmakers
René De Mot
Annemieke Madder
José Martins
C3
Conference
2012
Conformational and self-assembly properties of cyclic lipodepsipeptides of the viscosin group
Niels Geudens
Krisztina Fehér
Matthias De Vleeschouwer
Hassan Rokni-Zadeh
René De Mot
Annemieke Madder
José Martins
Davy Sinnaeve
C3
Conference
2012
Cross-linking in triplex DNA with furan-modified oligonucleotides
Ellen Gyssels
Emma Vercruysse
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2012
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Björn Van Gasse
Dieter Buyst
José Martins
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2012
Exploiting furan's versatile reactivity in reversible and irreversible orthogonal peptide labeling
Kurt Hoogewijs
Dieter Buyst
José Martins
Annemieke Madder
C3
Conference
2012
Fast RNA conjugations on solid phase by strain-promoted cycloadditions
Ishwar Singh
Colin Freeman
Annemieke Madder
Joseph S Vyle
Frances Heaney
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2012
Fluorescent castasterone reveals BRI1 signaling from the plasma membrane
Niloufer Irani
Simone Di Rubbo
Evelien Mylle
Jos Van den Begin
Joanna Pizon
Jaroslava Hniliková
Miroslav Šiša
Dieter Buyst
Josep Vilarrasa-Blasi
Anna Maria Szatmari
et al.
A1
Journal Article
in
NATURE CHEMICAL BIOLOGY
2012
From sequence defined oligomers to sequence controlled polymers through a thiolactone coupling strategy
Lieselot Carrette
Pieter Espeel
Sven Capenberghs
Katarzyna Bury
Andreas Baudot
D Van Lysbetten
Matthias Van Zele
Annemieke Madder
Filip Du Prez
C3
Conference
2012
Functionalized oligonucleotides as tools in catalysis
Vicky Gheerardijn
Annemieke Madder
Björn Van Gasse
Dieter Buyst
José Martins
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2012
Functionalized oligonucleotides as tools in catalysis
Vicky Gheerardijn
Björn Van Gasse
Dieter Buyst
Simone Di Micco
Guiseppe Bifulco
José Martins
Annemieke Madder
C3
Conference
2012
Functionalized oligonucleotides as tools in catalysis
Vicky Gheerardijn
Annemieke Madder
Björn Van Gasse
Dieter Buyst
José Martins
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2012
Furan-modified oligonucleotides for DNA cross-linking
Ellen Gyssels
Marieke Op de Beeck
Emma Vercruysse
Annemieke Madder
C3
Conference
2012
Furan-modified oligonucleotides for triplex DNA cross-linking
Ellen Gyssels
Emma Vercruysse
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2012
Furan-modified oligonucleotides for triplex DNA cross-linking
Ellen Gyssels
Emma Vercruysse
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2012
GOLVEN secretory peptides regulate auxin carrier turnover during plant gravitropic responses
Ryan Whitford
Ana Fernandez Salina
Ricardo Tejos Ulloa
Amparo Cuéllar Pérez
Jürgen Kleine-Vehn
Steffen Vanneste
Andrzej Drozdzecki
Johannes Leitner
Lindy Abas
Maarten Aerts
et al.
A1
Journal Article
in
DEVELOPMENTAL CELL
2012
Inactivated virus vaccines from chemistry to prophylaxis: merits, risks and challenges
Iris Delrue
Dieter Verzele
Annemieke Madder
Hans Nauwynck
A1
Journal Article
in
EXPERT REVIEW OF VACCINES
2012
Investigating the structure and stability of modified DNA duplexes with NMR spectroscopy
Björn Van Gasse
José Martins
Annemieke Madder
Dissertation
2012
Investigation of structure and dynamics of modified deoxyoligonucleotides via NMR spectroscopy
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Annemieke Madder
José Martins
C3
Conference
2012
Investigation of the structure and dynamics of modified DNA duplexes
Björn Van Gasse
Vicky Gheerardijn
Dieter Buyst
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2012
New methods for fluorescent labeling of peptide hormones and enzyme substrates
Kurt Hoogewijs
Dieter Buyst
José Martins
Annemieke Madder
C3
Conference
2012
New methods for fluorescent labeling of peptide hormones and enzyme substrates
Kurt Hoogewijs
Dieter Buyst
José Martins
Annemieke Madder
C3
Conference
2012
NMR investigation of the structure and dynamics of modified DNA duplexes
Björn Van Gasse
Vicky Gheerardijn
Dieter Buyst
Annemieke Madder
José Martins
C3
Conference
2012
NMR investigation of the structure and stability of modified DNA duplexes
Björn Van Gasse
Vicky Gheerardijn
Dieter Buyst
Annemieke Madder
José Martins
C3
Conference
2012
NMR investigation of the structure-function relationship of a natural cyclic lipodepsipeptide by synthetic modification
Matthias De Vleeschouwer
Jos Van den Begin
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2012
Sequence specific DNA cross-linking triggered by visible light
Marieke Op de Beeck
Annemieke Madder
A1
Journal Article
in
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
2012
Structure, function and dynamics of hydrolase like DNAzymes: an integrated NMR, X-ray and computational approach
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Annemieke Madder
José Martins
C3
Conference
2012
Structure, function and dynamics of modified deoxyoligonucleotides
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Annemieke Madder
José Martins
C3
Conference
2012
Structure, function and dynamics of modified oligonucleotides
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Annemieke Madder
José Martins
C3
Conference
2012
Study on the application of furan crosslinking at the protein-DNA interface
Lieselot Carrette
Michael Gattner
Jos Van den Begin
Thomas Carell
Takashi Morii
Annemieke Madder
C3
Conference
2012
Study on the application of furan crosslinking at the protein-DNA interface
Lieselot Carrette
Michael Gattner
Jos Van den Begin
Thomas Carell
Takashi Morii
Annemieke Madder
C3
Conference
2012
Study on the application of furan crosslinking at the protein-DNA interface
Lieselot Carrette
Michael Gattner
Thomas Carell
Takashi Morii
Annemieke Madder
C3
Conference
2012
The structure and stability of native and modified deoxyoligonucleotides
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2012
Towards the efficient synthesis of pseudodesmin A analogues
Matthias De Vleeschouwer
Jos Van den Begin
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2012
Towards the efficient synthesis of pseudodesmin a analogues as a means to investigate supramolecular structure function relationship in lipodepsipeptides
Matthias De Vleeschouwer
Jos Van den Begin
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2012
Towards the efficient synthesis of pseudodesmin A analogues to investigate structure function relationship in lipodepsipeptides
Matthias De Vleeschouwer
Jos Van den Begin
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2012
Towards the efficient synthesis of pseudodesmin A analogues to investigate supramolecular structure function relationship in lipodepsipeptides
Matthias De Vleeschouwer
Jos Van den Begin
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2012
Toxicity inspired crosslinking of DNA to its binding proteins
Lieselot Carrette
Marieke Op de Beeck
Takashi Morii
Annemieke Madder
C3
Conference
2012
2011
Cross-linking in triplex DNA with furan-modified oligonucleotides
Ellen Gyssels
Emma Vercruysse
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2011
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2011
Furan-oxidation-triggered inducible DNA cross-linking: acyclic versus cyclic furan-containing building blocks-on the benefit of restoring the cyclic sugar backbone
Kristof Stevens
Diederica Claeys
Saron Catak
Sara Figaroli
Michal Hocek
Jan M Tromp
Stefan Schurch
Veronique Van Speybroeck
Annemieke Madder
A1
Journal Article
in
CHEMISTRY-A EUROPEAN JOURNAL
2011
Investigation of the basepair opening dynamics of a DNA:DNA duplex containing a T.T mismatch
Björn Van Gasse
Vicky Gheerardijn
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2011
Investigation of the basepair opening dynamics of modified DNA duplexes
Björn Van Gasse
Vicky Gheerardijn
Dieter Buyst
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2011
Investigation of the impact of base pair modifications on the stability of a 14mer duplex containing a T.T mismatch
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Annemieke Madder
José Martins
C3
Conference
2011
Investigation of the structure and dynamics of modified DNA duplexes
Björn Van Gasse
Vicky Gheerardijn
Dieter Buyst
Annemieke Madder
José Martins
C3
Conference
2011
New inducible nucleic acid cross-linking methodology based on oxidation of incorporated furan moieties: scope and limitations
Marieke Op de Beeck
Ellen Gyssels
Diederica Claeys
Annemieke Madder
C1
Conference
2011
New methods for fluorescent labeling of peptide hormones and enzyme substrates
Kurt Hoogewijs
Maria Celina Bermudez Arias
Debbie Lauwers
Wannes Libbrecht
Annemieke Madder
C3
Conference
2011
Selective interstrand cross-linking through in situ oxidation of furan-modified oligodeoxynuleotides
Ellen Gyssels
Marieke Op de Beeck
Annemieke Madder
C3
Conference
2011
Shortcut access to peptidosteroid conjugates : building blocks for solid-phase bile acid scaffold decoration by convergent ligation
Dieter Verzele
Sara Figaroli
Annemieke Madder
A1
Journal Article
in
MOLECULES
2011
Synthesis and incorporation of a furan-modified adenosine building block for DNA interstrand crosslinking
Anup M Jawalekar
Marieke Op de Beeck
Floris L van Delft
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2011
The structure and stability of native and modified deoxyoligonucleotides
Dieter Buyst
Björn Van Gasse
Vicky Gheerardijn
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2011
Towards the efficient synthesis of pseudodesmin A analogues as a means to investigate supramolecular structure function relationship
Matthias De Vleeschouwer
Jos Van den Begin
Davy Sinnaeve
José Martins
Annemieke Madder
C3
Conference
2011
Unprecedented C-selective interstrand cross-linking through in situ oxidation of Furan-Modified Oligodeoxynucleotides
Marieke Op de Beeck
Annemieke Madder
A1
Journal Article
in
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
2011
2010
Design and automated generation of artificial estrogen receptor as potential endocrine disruptor chemical binders
Sara Figaroli
Annemieke Madder
A1
Journal Article
in
TETRAHEDRON
2010
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2010
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2010
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2010
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2010
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2010
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2010
Investigation of the basepair opening dynamics of a DNA:DNA duplex containing a T.T mismatch
Björn Van Gasse
Vicky Gheerardijn
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2010
Investigation of the basepair opening dynamics of a DNA:DNA duplex containing a T.T mismatch
Björn Van Gasse
Vicky Gheerardijn
Gilles Bruylants
Kristin Bartik
Annemieke Madder
José Martins
C3
Conference
2010
New methods for fluorescent labeling of peptide hormones and enzyme substrates
Kurt Hoogewijs
Maria Celina Bermudez Arias
Debbie Lauwers
Wannes Libbrecht
Annemieke Madder
C3
Conference
2010
New methods for fluorescent labeling of peptide hormones and enzyme substrates
Kurt Hoogewijs
Maria Celina Bermudez Arias
Debbie Lauwers
Wannes Libbrecht
Annemieke Madder
C3
Conference
2010
NF-31 color test uncovers 'hidden' alcohol functionalities in PEG-based resins for solid phase peptide synthesis
Lieselot Carrette
Dieter Verzele
Annemieke Madder
A1
Journal Article
in
TETRAHEDRON LETTERS
2010
Peptide scalpels for site-specific dissection of the DNA-protein interface
Dieter Verzele
Lieselot Carrette
Annemieke Madder
A2
Journal Article
in
DRUG DISCOVERY TODAY. TECHNOLOGIES
2010
Surprising duplex stabilisation upon mismatch introduction within triply modified duplexes
Mieke Catry
Vicky Gheerardijn
Annemieke Madder
A1
Journal Article
in
BIOORGANIC CHEMISTRY
2010
2009
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
C3
Conference
2009
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
Simone Di Micco
Guiseppe Bifulco
C3
Conference
2009
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
C3
Conference
2009
Development of chemosensors for endocrine disrupting chemicals (EDCs): synthesis and evaluation of solid-phase bound receptors
Steven Van der Plas
Annemieke Madder
Dissertation
2009
Development of miniature b(-HLH-)ZIP peptidosteroid conjugates as new transcription factor models
Dieter Verzele
Annemieke Madder
Dissertation
2009
From DNA cross-linking to peptide labeling: on the versatility of the furan-oxidation-conjugation strategy
Annelies Deceuninck
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2009
Furan-modified oligonucleotides for fast, high-yielding and site-selective DNA inter-strand cross-linking with non-modified complements
Kristof Stevens
Annemieke Madder
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2009
Proteome-wide substrate analysis indicates substrate exclusion as a mechanism to generate caspase-7 versus caspase-3 specificity
Dieter Demon
Petra Van Damme
Tom Vanden Berghe
Annelies Deceuninck
Joost Van Durme
Jelle Verspurten
Kenny Helsens
Francis Impens
Magdalena Wejda
Joost Schymkowitz
et al.
A1
Journal Article
in
MOLECULAR & CELLULAR PROTEOMICS
2009
Synthesis and NMR-analysis of modified duplexes: towards a new method for DNA cross-linking
Kristof Stevens
Annemieke Madder
Dissertation
2009
Towards a New SPE Material for EDCs: Fully Automated Synthesis of a Library of Tripodal Receptors Followed by Fast Screening by Affinity LC
Steven Van der Plas
Els Van Hoeck
Frederic Lynen
Patrick Sandra
Annemieke Madder
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2009
Towards the conformational mimicry of the measles virus HNE loop: design, synthesis and biological evaluation of a cyclic bile acid-peptide conjugate
Catherine Bode
Tom Bechet
Emmanuel Prodhomme
Katelijne Gheysen
Pieter Gregoir
José Martins
Claude Muller
Annemieke Madder
A1
Journal Article
in
ORGANIC & BIOMOLECULAR CHEMISTRY
2009
Untapped opportunities of resin-to-resin transfer reactions (RRTR) for convergent assembly of multivalent peptide conjugates: towards the 1st miniature cMyc-Max transcription factor mimic
Dieter Verzele
Annemieke Madder
C3
Conference
2009
2008
Biomimetic furan oxidation: a 'trojan horse' strategy for crosslinking and labeling of peptides
Annelies Deceuninck
Kristof Stevens
MO DE BEECK
Annemieke Madder
C3
Conference
2008
Development of a synthetic receptor for trace determination of endocrine disruptor chemicals
Sara Figaroli
Steven Van der Plas
Els Van Hoeck
T GOKMEN
Annemieke Madder
C3
Conference
2008
Development of catalytic oligonucleotides inspired by serine proteases
Vicky Gheerardijn
Annemieke Madder
C3
Conference
2008
Development of miniature b(-HLH-)ZIP peptidosteroid models
Dieter Verzele
Annemieke Madder
C3
Conference
2008
Ontwikkeling van oligonucleotidegebaseerde serine protease mimics
Mieke Catry
Annemieke Madder
Dissertation
2008
Synthesis and cross-linking of new furan nucleic acids
Kristof Stevens
Marieke Op de Beeck
Sara Figaroli
Annemieke Madder
P1
Conference
2008
Synthesis of a tripodal scaffold for solid phase synthesis of artificial receptors
Steven Van der Plas
An Gea
Sara Figaroli
Pierre De Clercq
Annemieke Madder
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2008
2007
Different approaches towards the design of dipodal: steroidal peptidomimetics
Dieter Verzele
Annemieke Madder
C3
Conference
2007
Fast and easy detection of aromatic amines on solid support
Steven Van der Plas
Pierre De Clercq
Annemieke Madder
A1
Journal Article
in
TETRAHEDRON LETTERS
2007
LC-(TIC/EIC)-MS as tool in the analysis of diastereomeric 3,12-aza-analogues of deoxycholic acid
Dieter Verzele
Jan Goeman
Annemieke Madder
A1
Journal Article
in
ARKIVOC
2007
Short synthesis of orthogonally protected 3 alpha,12 alpha-diamino-5 beta-cholan-24-oic acid, a dipodal steroid scaffold for combinatorial chemistry
Dieter Verzele
Annemieke Madder
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2007
Solid-phase approach towards the development of new DNA-binding steroidal peptidomimetics
Dieter Verzele
Annemieke Madder
C3
Conference
2007
Solid-phase-synthesis and evaluation of miniature b(-HLH-)ZIP peptidosteroid models
Dieter Verzele
Annemieke Madder
C3
Conference
2007
Synthesis and incorporation of a simple acyclic furan containing phosphoramidite
Kristof Stevens
Annemieke Madder
A1
Journal Article
in
NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS
2007
Synthesis of functionalised nucleosides for incorporation into nucleic acid-based serine protease mimics
Mieke Catry
Annemieke Madder
A1
Journal Article
in
MOLECULES
2007
Validation of a solid-phase-bound steroid scaffold for the synthesis of novel cyclic peptidosteroids
CA BODE
CP MULLER
Annemieke Madder
A1
Journal Article
in
JOURNAL OF PEPTIDE SCIENCE
2007
2006
Design of new DNA-binding steroidal peptidomimetics
Dieter Verzele
Annemieke Madder
C3
Conference
2006
Design of new DNA-binding steroidal peptidomimetics
Dieter Verzele
Annemieke Madder
C3
Conference
2006
Development of chemosensors for endocrine disrupting chemicals: Synthesis and evaluation solid phase bound model receptors
Steven Van der Plas
Annemieke Madder
C3
Conference
2006
Different approaches towards the design of dipodal: steroidal peptidomimetics
Dieter Verzele
Annemieke Madder
C3
Conference
2006
Evaluation of a steroidal scaffold for the conformational restriction of peptides in the development of peptide vaccines
CA BODE
Annemieke Madder
C3
Conference
2006
Korte synthese van een orthogonaal-beschermde steroïdale scaffold met gedefinieerde stereochemie
Dieter Verzele
Annemieke Madder
C3
Conference
2006
Solid-supported synthesis of highly functionalized tripodal peptides with flexible but preorganized geometry: towards potential serine protease mimics
An Gea
Nadia Farcy
Núria Roqué i Rossell
José Martins
Pierre De Clercq
Annemieke Madder
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2006
Validation of a furan moiety as a masked reactive enal functionality for peptide-DNA cross-linking purposes
Annelies Deceuninck
Annemieke Madder
C3
Conference
2006
2005
Combinatorial approach towards the development of a new type of dipodal DNA-binding peptides
Dieter Verzele
Annemieke Madder
C3
Conference
2005
Fine-tuning furan toxicity: fast and quantitative DNA interchain crosslink formation upon selective oxidation of a furan containing oligonucleotide
S HALILA
T VELASCO
Pierre De Clercq
Annemieke Madder
A1
Journal Article
in
CHEMICAL COMMUNICATIONS
2005
Short synthesis of an orthogonally protected dipodal steroid scaffold, building block in the design of bZIP-like peptides
Dieter Verzele
Annemieke Madder
C3
Conference
2005
2003
Stabilisation of RNA bulges by oligonucleotide complements containing an adenosine analogue
Annemieke Madder
R EHRL
R STROMBERG
A1
Journal Article
in
CHEMBIOCHEM
2003
Stabilization of RNA bulges by oligonucleotides containing 2 '-naphthylmethyl-2 '-deoxytubercidine
Annemieke Madder
R EHRL
R STROMBERG
A1
Journal Article
in
NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS
2003
2002
Evaluation of a two-stage screening procedure in the combinatorial search for serine protease-like activity
Annemieke Madder
L LI
Hilde De Muynck
Nadia Farcy
Dirk Van Haver
Franky Fant
G VANHOENACKER
Patrick Sandra
AP DAVIS
Pierre De Clercq
A1
Journal Article
in
JOURNAL OF COMBINATORIAL CHEMISTRY
2002
Peptide sequence determination of peptidosteroids on a single bead by electrospray ionization-mass spectroscopy.
G VANHOENACKER
L LIU
Frederic Lynen
Annemieke Madder
Pierre De Clercq
Patrick Sandra
A1
Journal Article
in
JOURNAL OF SEPARATION SCIENCE
2002
2001
A pentaerythritol-based molecular scaffold for solid-phase combinatorial chemistry
Nadia Farcy
Hilde De Muynck
Annemieke Madder
N HOSTEN
Pierre De Clercq
A1
Journal Article
in
ORGANIC LETTERS
2001
2000
Application of combinatorial procedures in the search for serine-protease-like activity with focus on the acyl transfer step
Hilde De Muynck
Annemieke Madder
Nadia Farcy
Pierre De Clercq
MN PEREZ-PAYAN
LM OHBERG
AP DAVIS
A1
Journal Article
in
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
2000
Rationally designed bicyclic lactams control different turn motifs and folding patterns in hexapeptide mimics.
L BELVISI
C GENNARI
Annemieke Madder
A MIELGO
D POTENZA
C SCOLASTICO
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
2000
1999
Novel sensitive colorimetric assay for visual detection of solid-phase bound amines
Annemieke Madder
Nadia Farcy
Noël Hosten
Hilde De Muynck
Pierre De Clercq
John Barry
Anthony P. Davis
A1
Journal Article
in
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY
1999
1998
Stepwise approach toward first generation nonenzymatic hydrolases
Annemieke Madder
Pierre De Clercq
Jean-Paul Declercq
A1
Journal Article
in
JOURNAL OF ORGANIC CHEMISTRY
1998
1997
Mechanism of esterification of 1,3-dimethylamino alcohols by N-acetylimidazole in acetonitrile and the influence of alkyl and geminal dialkyl substitution upon the rate
Annemieke Madder
S SEBASTIAN
Dirk Van Haver
Pierre De Clercq
H MASKILL
A1
Journal Article
in
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2
1997
Stapsgewijze ontwikkeling van niet-enzymatische hydrolasen
Annemieke Madder
P. De Clercq
Dissertation
1997
Structure-reactivity relationships in the rate of esterification by acetylimidazole : the influence of the second hydroxy group and of the length of the N-omega-hydroxy-n-alkyl chain in 3-(N-methyl, N-omega-hydroxy-n-alkyl)amino-2-tert-butylpropan-1-ols
Annemieke Madder
Pierre De Clercq
Howard Maskill
A1
Journal Article
in
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2
1997
The synthesis of di(hydroxyalkyl) substituted bicyclic guanidines
Annemieke Madder
I Munster
U. Rolle
Pierre De Clercq
A1
Journal Article
in
BULLETIN DES SOCIETES CHIMIQUES BELGES
1997
1995
Synthesis of a chiral DI(hydroxyalkyl) substituted bicyclic guanidine
I MUNSTER
U ROLLE
Annemieke Madder
Pierre De Clercq
A1
Journal Article
in
TETRAHEDRON-ASYMMETRY
1995