Research Explorer

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Researcher

Anneleen Wieme

Publications & Research Data

Awards & Distinctions

56 Results

2026

Microbiological survey of spontaneous vegetable fermentations : a food safety perspective

Mathis VermeerschCintia MayrAn MaesAnneleen WiemeBruno De MeulenaerPeter VandammeLiesbeth JacxsensTanja KosticMieke Uyttendaele

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Post-harvest variability of dominant bacterial taxa of Equilibrium Modified‐Atmosphere Packaged fresh‐cut Romaine lettuce

Thomas De BockAnneleen WiemeCharlotte PeetersPeter VandammeFrank DevlieghereMieke Uyttendaele

A1 Journal Article in POSTHARVEST BIOLOGY AND TECHNOLOGY

The impact of traditional wheat landraces on lambic beer production is limited

Dries BongaertsAtena Sadat SombolestaniJonas De RoosArne BouchezAlejandro Pinilla CroonenberghsMargo CnockaertAnneleen WiemePeter VandammeStefan WeckxLuc De Vuyst

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

2025

Imbroritus primus gen. nov., sp. nov., a facultatively autotrophic bacterium from environmental water samples

Charlotte PeetersStéphanie SteyaertMatan ShelomiAnneleen WiemeEliza DepoorterEvelien De CanckKurt HoufPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

2024

A comparative genomic analysis of Fructobacillus evanidus sp. nov. from bumble bees

Juliana Botero CardonaCharlotte PeetersEvelien De CanckDavid LaureysAnneleen WiemeIlse CleenwerckEliza DepoorterJessy PraetDenis MichezGuy Smagghe et al.

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Accurate strain identification and characterization are essential for an optimal valorization trajectory

Anneleen WiemeEliza DepoorterIlse CleenwerckCharlotte PeetersAnn HellemansPeter Vandamme

Microbial dynamics in equilibrium modified-atmosphere packaged fresh-cut Romaine lettuce : a culturomics approach

Thomas De BockAnneleen WiemePeter VandammeFrank DevlieghereMieke Uyttendaele

Microbial dynamics in equilibrium modified-atmosphere packaged fresh-cut Romaine lettuce : a culturomics approach

Thomas De BockAnneleen WiemePeter VandammeFrank DevlieghereMieke Uyttendaele

Microbial ecology and metabolite dynamics of backslopped triticale sourdough productions and the impact of scale

Victor Gonzalez-AlonsoInes PradalYohanes Raditya WardhanaMargo CnockaertAnneleen WiemePeter VandammeLuc De Vuyst

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Novel Ralstonia species from human infections : improved matrix-assisted laser desorption/ionization time-of-flight mass spectrometry-based identification and analysis of antimicrobial resistance patterns

Stephanie SteyaertCharlotte PeetersAnneleen WiemeAstrid MuyldermansKristof VandoorslaerTheodore SpilkerIngrid WyboDenis PiérardJohn J. LiPumaPeter Vandamme

A1 Journal Article in MICROBIOLOGY SPECTRUM

Refermentation and maturation of lambic beer in bottles: a necessary step for gueuze production

Dries BongaertsArne BouchezJonas De RoosMargo CnockaertAnneleen WiemePeter VandammeStefan WeckxLuc De Vuyst

A1 Journal Article in APPLIED AND ENVIRONMENTAL MICROBIOLOGY

StrainInSight : a unique private strain collection and innovative tools for novel strain discovery

Charlotte PeetersAnneleen WiemeMaaike PerneelEliza DepoorterIlse CleenwerckAnn HellemansPeter Vandamme

StrainInSight : a unique private strain collection and innovative tools to facilitate novel strain discovery

Eliza DepoorterAnneleen WiemeCharlotte PeetersIlse CleenwerckAnn HellemansPeter Vandamme

Various cold storage-backslopping cycles show the robustness of Limosilactobacillus fermentum IMDO 130101 as starter culture for Type 3 sourdough production

Inés PradalVíctor González-AlonsoYohanes Raditya WardhanaMargo CnockaertAnneleen WiemePeter VandammeLuc De Vuyst

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

2023

Brytella acorum gen. nov., sp. nov., a novel acetic acid bacterium from sour beverages

Atena Sadat SombolestaniDries BongaertsEliza DepoorterIlse CleenwerckAnneleen WiemeScott J. BrittonStefan WeckxLuc De VuystPeter Vandamme

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Search for novel bacteria to valorize in the food industry : a culturomics approach

Anneleen WiemeCharlotte PeetersEliza DepoorterPeter Vandamme

StrainInSight : a unique genome database to facilitate novel strain discovery for the food industry

Eliza DepoorterAnneleen WiemeCharlotte PeetersVimac Nolla ArdèvolAnn HellemansFabienne VertéPeter Vandamme

StrainInSight : a unique private strain collection and innovative tools to facilitate novel strain discovery in the food and feed industry

Charlotte PeetersEliza DepoorterAnneleen WiemeIlse CleenwerckAnn HellemansPeter Vandamme

The importance of risk assessment for the use of microorganisms in the food and feed chains

Ilse CleenwerckAnneleen WiemeAnn HellemansPeter Vandamme

2022

Isolation and identification of a Bacillus sp. from freshwater sediment displaying potent activity against bacteria and phytopathogen fungi

Miladis I. CamachoJanet M. GarcíaDianelis RogetArmando FerrerAnneleen WiemePeter VandammeSuyén RodríguezGabriel LlauradóYaneisy LescaylleLeonor Peña et al.

A1 Journal Article in CURRENT MICROBIOLOGY

Isolation and preliminary characterisation of wild yeasts isolated from natural niches for non- and low alcoholic beer production

Arne DemeesterDavid LaureysAnneleen WiemePeter VandammeJessika De Clippeleer

Microbial diversity and antimicrobial susceptibility in endotracheal tube biofilms recovered from mechanically ventilated COVID-19 patients

Frits van CharanteAnneleen WiemePetra RigoleEvelien De CanckLisa OstynLucia GrassiDieter DeforceAurélie CrabbéPeter VandammeMarie Joossens et al.

A2 Journal Article in BIOFILM

2021

Bacterial species identification using MALDI-TOF mass spectrometry and machine learning techniques : a large-scale benchmarking study

Thomas MortierAnneleen WiemePeter VandammeWillem Waegeman

A1 Journal Article in COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL

Burkholderia perseverans sp. nov., a bacterium isolated from the Restinga ecosystem, is a producer of volatile and diffusible compounds that inhibit plant pathogens

Jackeline Pereira AndradeHarisson Guimarães de SouzaLarissa Carvalho FerreiraMargo CnockaertEvelien De CanckAnneleen WiemeCharlotte PeetersEduardo GrossJorge Teodoro De SouzaPhellippe Arthur Santos Marbach et al.

A1 Journal Article in BRAZILIAN JOURNAL OF MICROBIOLOGY

Characterization of novel Gluconobacter species from fruits and fermented food products : Gluconobacter cadivus sp. nov., Gluconobacter vitians sp. nov. and Gluconobacter potus sp. nov

Atena Sadat SombolestaniIlse CleenwerckMargo CnockaertWim BorremansAnneleen WiemeLuc De VuystPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genomic aromatic compound degradation potential of novel Paraburkholderia species : Paraburkholderia domus sp. nov., Paraburkholderia haematera sp. nov. and Paraburkholderia nemoris sp. nov.

Sarah VanwijnsbergheCharlotte PeetersEmmelie De RidderCharles DumolinAnneleen WiemeNico BoonPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Gluconacetobacter dulcium sp. nov., a novel Gluconacetobacter species from sugar-rich environments

Atena Sadat SombolestaniIlse CleenwerckMargo CnockaertWim BorremansAnneleen WiemeYvan MoutiaStijn SpaepenLuc De VuystPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Identification and characterization of acid-tolerant spore-forming spoilage bacteria from acidified and low-acid pasteurized sauces

Rongxue SunAn VermeulenAnneleen WiemePeter VandammeFrank Devlieghere

A1 Journal Article in LWT-FOOD SCIENCE AND TECHNOLOGY

2020

Burkholderia cepacia complex taxon K : where to split?

Eliza DepoorterEvelien De CanckCharlotte PeetersAnneleen WiemeMargo CnockaertJames E. A. ZlosnikJohn J. LiPumaTom CoenyePeter Vandamme

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

Micromonospora fluminis sp. nov., isolated from mountain river sediment

Miladis Isabel Camacho PozoAnneleen WiemeSuyén Rodríguez PérezGabriel Llauradó MauryCharlotte PeetersCindy SnauwaertYaneisy Lescaylle VeranesLeonor Peña ZamoraPeter SchumannPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Nocardiopsis dassonvillei subsp. crassaminis subsp. nov., isolated from freshwater sediment, and reappraisal of Nocardiopsis alborubida Grund and Kroppenstedt 1990 emend. Nouioui et al. 2018

Miladis Isabel Camacho PozoAnneleen WiemeSuyén Rodríguez PérezGabriel Llauradó MauryCindy SnauwaertYaneisy Lescaylle VeranesLeonor Peña ZamoraPeter SchumannPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Novel acetic acid bacteria from cider fermentations : acetobacter conturbans sp. nov. and acetobacter fallax sp. nov

Atena Sadat SombolestaniIlse CleenwerckMargo CnockaertWim BorremansAnneleen WiemeLuc De VuystPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

2019

Actinomadura roseirufa sp. nov., producer of semduramicin, a polyether ionophore

Anneleen WiemeFrancis GosseléCindy SnauwaertIlse CleenwerckPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Introducing SPeDE : high-throughput dereplication and accurate determination of microbial diversity from matrix-assisted laser desorption-ionization time of flight mass spectrometry data

Charles DumolinMaarten AertsBart VerheydeSimon SchellaertTim VandammeFelix Van der JeugtEvelien De CanckMargo CnockaertAnneleen WiemeIlse Cleenwerck et al.

A1 Journal Article in MSYSTEMS

2017

Microbial ecology of traditional beer fermentations

Freek SpitaelsAnneleen WiemeIsabel SnauwaertLuc De VuystPeter Vandamme

Bookchapter in Brewing microbiology : current research, omics, and microbial ecology

2016

MALDI-TOF MS as a novel tool for dereplication and characterization of microbiota in bacterial diversity studies

Freek SpitaelsAnneleen WiemePeter Vandamme

Bookchapter in Applications of mass spectrometry in microbiology : from strain characterization to rapid screening for antibiotic resistance

Matrix-assisted laser desorption/ionization time-of-flight mas spectrometry (MALDI-TOF MS) for brewing microbiology

Anita Van LandschootAnneleen DecloedtFreek SpitaelsKoenraad Van HoordePeter VandammeAnneleen Wieme

2015

Microbiota and metabolites of aged bottled gueuze beers converge to the same composition

Freek SpitaelsSimon Van KerrebroeckAnneleen WiemeIsabel SnauwaertMaarten AertsAnita Van LandschootLuc De VuystPeter Vandamme

A1 Journal Article in FOOD MICROBIOLOGY

The microbial diversity of an industrially produced lambic beer shares members of a traditionally produced one and reveals a core microbiota for lambic beer fermentation

Freek SpitaelsAnneleen WiemeMaarten JanssensMaarten AertsAnita Van LandschootLuc De VuystPeter Vandamme

A1 Journal Article in FOOD MICROBIOLOGY

2014

Acetobacter lambici sp. nov., isolated from fermenting lambic beer

Freek SpitaelsLeilei LiAnneleen WiemeTom BalzariniIlse CleenwerckAnita Van LandschootLuc De VuystPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis

Leilei LiAnneleen WiemeFreek SpitaelsTom BalzariniOlga C NuñesCélia M ManaiaAnita Van LandschootLuc De VuystIlse CleenwerckPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry as a monitoring tool for in-house brewer's yeast contamination: a proof of concept

Anneleen WiemeFreek SpitaelsPeter VandammeAnita Van Landschoot

A1 Journal Article in JOURNAL OF THE INSTITUTE OF BREWING

Effects of growth medium on matrix-assisted laser desorption/ionization time-of-flight mass spectra: a case study of acetic acid bacteria

Anneleen WiemeFreek SpitaelsMaarten AertsKatrien De BruyneAnita Van LandschootPeter Vandamme

A1 Journal Article in APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gluconobacter cerevisiae sp. nov., isolated from the brewery environment

Freek SpitaelsAnneleen WiemeTom BalzariniIlse CleenwerckAnita Van LandschootLuc De VuystPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Identification of beer-spoilage bacteria using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

Anneleen WiemeFreek SpitaelsMaarten AertsKatrien De BruyneAnita Van LandschootPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry as a novel tool for detection, identification and typing of spoilage microbiota in the brewing industry

Anneleen WiemePeter VandammeAnita Van Landschoot

The microbial diversity of traditional spontaneously fermented lambic beer

Freek SpitaelsAnneleen WiemeMaarten JanssensMaarten AertsHeide-Marie DanielAnita Van LandschootLuc De VuystPeter Vandamme

A1 Journal Article in PLOS ONE

2013

Application of matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) as a fast identification tool for beer spoilage bacteria

Anneleen WiemeAnita Van LandschootPeter Vandamme

Monitoring the purity of industrial starter cultures using MALDI-TOF MS

Anneleen WiemeFreek SpitaelsAn CoorevitsAnita Van LandschootPeter Vandamme

2012

Exploration of matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) as a fast identification tool for beer spoilage bacteria

Anneleen WiemeAnita Van LandschootPeter Vandamme

Pediococcus lolii DSM 19927T and JCM 15055T are strains of Pediococcus acidilactici

Anneleen WiemeIlse CleenwerckAnita Van LandschootPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Use of matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) for the identification of beer spoilage bacteria

Anneleen WiemeAnita Van LandschootPeter Vandamme

2011

Exploration of matrix-assisted laser desorption ionization-time of flight mass spectrometry as a fast identification tool for beer spoilage bacteria

Anneleen WiemeAnita Van LandschootPeter Vandamme

Exploration of matrix-assisted laser desorption ionization-time of flight mass spectrometry as a fast identification tool for beer spoilage bacteria

Anneleen WiemeAnita Van LandschootPeter Vandamme

2010

Exploration of MALDI-TOF MS as a fast identification tool for food spoilage bacteria

Anneleen WiemeElisabeth VercammenAnita Van LandschootPeter Vandamme

Exploration of matrix-assisted laser desorption/ionization-time of flight mass spectrometry as a fast identification tool for beer spoilage bacteria

Anneleen WiemeElisabeth VercammenAnita Van LandschootPeter Vandamme