Project

The quest for an aldose C3-epimerase: the missing link in sugar conversions

Code
11P1W24N
Duration
01 November 2023 → 31 October 2027
Funding
Research Foundation - Flanders (FWO)
Promotor
Research disciplines
  • Natural sciences
    • Structural bioinformatics and computational proteomics
    • Synthetic biology
    • Phylogeny and comparative analysis
  • Medical and health sciences
    • Carbohydrates
  • Engineering and technology
    • Biocatalysis and enzyme technology
Keywords
semi-rational design aldose C3-epimerase production of rare aldoses
 
Project description

With the growing importance of rare sugars in a myriad of industries, including food and pharmaceuticals, the search for cost-effective and efficient production intensifies. Consequently, carbohydrate epimerases active on unsubstituted sugars have sparked great industrial attention, as they allow for a one-step production of rare sugars (e.g. allulose) directly from their abundant and cheap counterparts (e.g. fructose). However, the link between abundant aldoses (e.g. glucose, galactose) and their rare C3-epimers (e.g. allose, gulose) has yet to be established. Therefore, the discovery or design of an aldose C3-epimerase would grant these enzymes a central role as biocatalysts in the rare aldose production. An understudied group of epimerases, i.e. aldolase-type epimerases, mechanistically allow for the C3-epimerisation of aldoses, but have yet to demonstrate this specificity. Therefore, this project seeks to engineer these enzymes into aldose C3-epimerases using semi-rational enzyme design. This will be achieved by identifying structure-function relationships and unlocking specificity determinants through an in-depth analysis of the mechanism, dynamics and evolution. As such, the project ventures in the uncharted territory of aldolase-type epimerases to develop new enzymes for rare sugar synthesis.