Research Explorer

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Project

A jump start for metaproteomics informatics

Outputs and Outcomes

Publications

Cov²MS : an automated and quantitative matrix-independent assay for mass spectrometric measurement of SARS-CoV-2 nucleocapsid protein

Bart Van PuyveldeKatleen Van UytfangheLaurence Van OudenhoveRalf GabrielsTessa Van RoyenArne MatthysMorteza RazaviRichard YipTerry PearsonNicolas DrouinJan ClaereboudtDominic FoleyRobert WardleKevin WyndhamThomas HankemeierDonald JonesXavier SaelensGeert MartensChristophe StoveDieter DeforceLennart MartensJohannes P.C. VissersN. Leigh AndersonMaarten Dhaenens et al.

A1 Journal Article in ANALYTICAL CHEMISTRY

Sensitive and specific spectral library searching with CompOmics Spectral library Searching tool and Percolator

Genet Abay ShiferawRalf GabrielsRobbin BouwmeesterTim Van Den BosscheElien VandermarliereLennart MartensPieter-Jan Volders

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

Pout2Prot : an efficient tool to create protein (sub)groups from Percolator Output Files

Kay SchallertPieter VerschaffeltBart MesuereDirk BenndorfLennart MartensTim Van Den Bossche

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

DeepLC can predict retention times for peptides that carry as-yet unseen modifications

Robbin BouwmeesterRalf GabrielsNiels HulstaertLennart MartensSven Degroeve

A1 Journal Article in NATURE METHODS

Spectral prediction features as a solution for the search space size problem in proteogenomics

Steven VerbruggenSiegfried GessulatRalf GabrielsAnna MatsarokiHendrik Van de VoordeBernhard KusterSven DegroeveLennart MartensWim Van CriekingeMathias WilhelmGerben Menschaert et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS