Research Explorer

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Project

The importance of epistasis and network rewiring in determining the adaptive outcome of bacterial populations subjected to antibiotic gradients

Outputs and Outcomes

Publications

Digital profiling of gene expression from histology images with linearized attention

Marija PizuricaYuanning ZhengFrancisco Carrillo-PerezHumaira NoorWei YaoChristian WohlfartAntoaneta VladimirovaKathleen MarchalOlivier Gevaert

A1 Journal Article in NATURE COMMUNICATIONS

Synthetic multimodal data modelling for data imputation

Francisco Carrillo-PerezMarija PizuricaKathleen MarchalOlivier Gevaert

Editorial material

Expression divergence of expansin genes drive the heteroblasty in Ceratopteris chingii

Yue ZhangYves Van de PeerBei LuSisi ZhangJingru CheJinming ChenKathleen MarchalXingyu Yang

A1 Journal Article in BMC BIOLOGY

Extracting functional insights from loss-of-function screens using deep link prediction

Pieter-Paul StrybolMaarten LarmuseauLouise de Schaetzen van BrienenTim Van den BulckeKathleen Marchal

A2 Journal Article in CELL REPORTS METHODS

Antibiotic cycling affects resistance evolution independently of collateral sensitivity

Pauline BrepoelsKenny AppermansCamilo Andrés Pérez RomeroBram LoriesKathleen MarchalHans P. Steenackers

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

Evolution of isoform‐level gene expression patterns across tissues during lotus species divergence

Yue ZhangXingyu YangYves Van de PeerJinming ChenKathleen MarchalTao Shi

A1 Journal Article in PLANT JOURNAL

BLSSpeller to discover novel regulatory motifs in maize

Razgar Seyed RahmaniDries DecapJan FostierKathleen Marchal

A1 Journal Article in DNA RESEARCH

OMEN : network-based driver gene identification using mutual exclusivity

Dries Van DaeleBram WeytjensLuc De RaedtKathleen Marchal

A1 Journal Article in BIOINFORMATICS

Comparative transcriptome analysis of two maize genotypes with different tolerance to salt stress

Taher MohasseliRazgar Seyed RahmaniReza DarvishzadehSara DezhsetanKathleen Marchal

A1 Journal Article in CEREAL RESEARCH COMMUNICATIONS