Research Explorer

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Project

High resolution networks for the analysis of genetic rewiring in cancer

Outputs and Outcomes

Publications

ELLIPSIS : robust quantification of splicing in scRNA-seq

Marie Van HeckeNiko BeerenwinkelThibault LootensJan FostierRobrecht RaedtKathleen Marchal

A1 Journal Article in BIOINFORMATICS

Digital profiling of gene expression from histology images with linearized attention

Marija PizuricaYuanning ZhengFrancisco Carrillo-PerezHumaira NoorWei YaoChristian WohlfartAntoaneta VladimirovaKathleen MarchalOlivier Gevaert

A1 Journal Article in NATURE COMMUNICATIONS

Synthetic multimodal data modelling for data imputation

Francisco Carrillo-PerezMarija PizuricaKathleen MarchalOlivier Gevaert

Editorial material

Whole slide imaging-based prediction of TP53 mutations identifies an aggressive disease phenotype in prostate cancer

Marija PizuricaMaarten LarmuseauKim Van der EeckenLouise de Schaetzen van BrienenFrancisco Carrillo-PerezSimon IsphordingNicolaas LumenJo Van DorpePiet OstSofie VerbekeOlivier GevaertKathleen Marchal et al.

A1 Journal Article in CANCER RESEARCH

Antibiotic cycling affects resistance evolution independently of collateral sensitivity

Pauline BrepoelsKenny AppermansCamilo Andrés Pérez RomeroBram LoriesKathleen MarchalHans P. Steenackers

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

OMEN : network-based driver gene identification using mutual exclusivity

Dries Van DaeleBram WeytjensLuc De RaedtKathleen Marchal

A1 Journal Article in BIOINFORMATICS

Comparative transcriptome analysis of two maize genotypes with different tolerance to salt stress

Taher MohasseliRazgar Seyed RahmaniReza DarvishzadehSara DezhsetanKathleen Marchal

A1 Journal Article in CEREAL RESEARCH COMMUNICATIONS