Research Explorer

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Project

Interpretable models for integrative single-cell spatial transcriptomics

Outputs and Outcomes

Publications

Cytotoxic NK cells impede response to checkpoint immunotherapy in melanoma with an immune-excluded phenotype

Joanna PozniakNiccolò RodaEwout LandeloosAsier AntoranzYannick Van HerckAmber De VisscherPhilip Georg DemaerelLukas VanwynsbergheJeroen DeclercqChristos GkemisisGreet BervoetsNo-Joon SongAyse BassezRobin BROWAEYSLotte PollarisFrancesca M. BosisioVeerle BoecxstaensYvan SaeysDiether LambrechtsZihai LiPatrick MatthysOliver BechterJean-Christophe Marine et al.

A1 Journal Article in CANCER DISCOVERY

SpatialData : an open and universal data framework for spatial omics

Luca MarconatoGiovanni PallaKevin A. YamauchiIsaac VirshupElyas HeidariTim TreisWouter-Michiel VierdagMarcella TothSonja StockhausRahul B. ShresthaBenjamin RombautLotte PollarisLaurens LehnerHarald VoehringerIlia KatsYvan SaeysSinem K. SakaWolfgang HuberMoritz GerstungJosh MooreFabian J. TheisOliver Stegle et al.

A1 Journal Article in NATURE METHODS

A TCF4-dependent gene regulatory network confers resistance to immunotherapy in melanoma

Joanna PozniakDennis PedriEwout LandeloosYannick Van HerckAsier AntoranzLukas VanwynsbergheAda NowosadNiccolo RodaSamira MakhzamiGreet BervoetsLucas Ferreira MacielCarlos Ariel Pulido-VicunaLotte PollarisRuth SeurinckFang ZhaoKarine Flem-KarlsenWilliam DamskyLimin ChenDespoina KaragianniSonia CinqueSam KintKaty VandereykenBenjamin RombautThierry VoetFrank VernaillenWim AnnaertDiether LambrechtsVeerle BoecxstaensYvan SaeysJoost van den OordFrancesca BosisioPanagiotis KarrasA. Hunter ShainMarcus BosenbergEleonora LeucciAnnette PaschenFlorian RambowOliver BechterJean-Christophe Marine et al.

A1 Journal Article in CELL