Project

Blocking virus entry using structure-guided designed biologics.

Code
1S56025N
Duration
01 November 2024 → 31 October 2028
Funding
Research Foundation - Flanders (FWO)
Research disciplines
  • Medical and health sciences
    • Adaptive immunology
    • Virology
    • Vaccines
    • Biopharmaceutics
    • Applied immunology
Keywords
Pandemic preparedness Enveloped virus Membrane fusion and inhibition
 
Project description

Enveloped viruses use membrane fusion proteins to deliver their genome into the host cell. Many human viruses use so-called class 1 fusion proteins to mediate this virus entry step. The formation of a six-helix bundle by zippering up of the carboxy-terminal heptad repeat (HR) with the amino terminal HR is a hallmark of class 1 fusion proteins that is essential for membrane fusion. Our aim is to generate vaccines and antibody-based antiviral drug candidates that can prevent the six-helix bundle formation by tightly locking the carboxy-terminal HR in its trimeric prefusion state. We will apply a structure-guided design of immunogens that focus the immune response to the trimeric carboxy-terminal HR as it is present in the prefusion conformation of the viral class 1 fusion protein. Antibody-based candidate biologics that selectively bind with high affinity to the trimeric carboxyterminal HR in the prefusion state will be selected from natural as well as synthetic single-domain antibody display libraries. We will also evaluate the possibilities of de novo designed single-domain antibody approaches, a rapidly evolving field in computational biology. Our approach will be applied to the fusion proteins of corona-, Nipah- Hendra-, and Ebola viruses. This project is inspired by our recent discovery of ultra-potent SARS-CoV-1- and -2-neutralising single-domain antibodies that specifically bind the trimeric, carboxy-terminal HR of the spike protein.