Research Explorer

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Researcher

Ytse Noppe

Awards & Distinctions

20 Results

2025

Integrative assessment of total and intact HIV-1 reservoir by a 5-region multiplexed rainbow DNA digital PCR assay

Mareva DelporteLaurens LambrechtsEvy BlommeWillem van SnippenbergSofie RutsaertMaxime VerschooreEvelien De SmetYtse NoppeNele De LangheMarie-Angélique De Scheerder et al.

A1 Journal Article in CLINICAL CHEMISTRY

2024

Longitudinal analysis in early treated individuals reveals alteration in the HIV-1 integration site landscape and composition of the inducible reservoir

Tine StruyveMarion PardonsJozefien De ClercqLiesbet TermoteLaurens LambrechtsYtse NoppeM. LichterfeldSofie RutsaertLinos Vandekerckhove

2023

HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization

Laurens LambrechtsNoah BonineRita VerstraetenMarion PardonsYtse NoppeSofie RutsaertFilip Van NieuwerburghWim Van CriekingeBasiel ColeLinos Vandekerckhove

A1 Journal Article in NUCLEIC ACIDS RESEARCH

HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization

Laurens LambrechtsNoah BonineRita VerstraetenMarion PardonsYtse NoppeSofie RutsaertFilip Van NieuwerburghWim Van CriekingeBasiel ColeLinos Vandekerckhove

Linking inducible HIV-1 reservoir to rebound after treatment interruption

Laurens LambrechtsYtse NoppeMarion PardonsBasiel ColeSofie RutsaertStéphane De WitGuido VanhamEric FlorenceLinos Vandekerckhove

Potent latency reversal by Tat RNA-containing nanoparticle enables multi-omic analysis of the HIV-1 reservoir

Marion PardonsBasiel ColeLaurens LambrechtsWillem van SnippenbergSofie RutsaertYtse NoppeNele De LangheAnnemieke DhondtJerel VegaFilmon Eyassu et al.

A1 Journal Article in NATURE COMMUNICATIONS

2022

Extensive characterization of HIV-1 reservoirs reveals links to plasma viremia before and during analytical treatment interruption

Basiel ColeLaurens LambrechtsZoe BoyerYtse NoppeMarie-Angélique De ScheerderJohn-Sebastian EdenBram VranckenTimothy E. SchlubSherry McLaughlinLisa M. Frenkel et al.

A1 Journal Article in CELL REPORTS

Long-read sequencing assay allows accurate characterization of the HIV-1 reservoir

Laurens LambrechtsRita VerstraetenNoah BonineYtse NoppeSofie RutsaertMarion PardonsBasiel ColeLinos Vandekerckhove

Long-read sequencing assay allows accurate characterization of the HIV-1 reservoir

Laurens LambrechtsRita VerstraetenNoah BonineYtse NoppeSofie RutsaertMarion PardonsBasiel ColeLinos Vandekerckhove

Long-read sequencing assay allows accurate characterization of the HIV-1 reservoir

Laurens LambrechtsRita VerstraetenNoah BonineYtse NoppeMarion PardonsBasiel ColeLinos Vandekerckhove

2021

In-depth characterization of HIV-1 reservoirs reveals links to viral rebound during treatment interruption

Basiel ColeLaurens LambrechtsZoe BoyerYtse NoppeMarie-Angélique De ScheerderJohn-Sebastian EdenBram VranckenTimothy SchlubSherry McLaughlinLisa M. Frenkel et al.

In-depth single-cell analysis of translation-competent HIV-1 reservoirs identifies cellular sources of plasma viremia

Basiel ColeLaurens LambrechtsPierre GantnerYtse NoppeNoah BonineWojciech WitkowskiLennie ChenSarah PalmerJames I. MullinsNicolas Chomont et al.

A1 Journal Article in NATURE COMMUNICATIONS

In-depth single-cell analysis of translation-competent HIV-1 reservoirs identifies cellular sources of residual viremia and rebound viruses

Basiel ColeLaurens LambrechtsPierre GantnerYtse NoppeNoah BonineLennie ChenSarah PalmerJames MullinsNicolas ChomontMarion Pardons et al.

2020

Combined assays shed new light on HIV-1 proviral sequence and linked integration site

Basiel ColeLaurens LambrechtsMaria ArtesiVincent HahautWojciech WitkowskiYtse NoppeAnnemieke DhondtKeith DurkinAnne Van den BroekeLinos Vandekerckhove

Evaluating predictive markers for viral rebound and safety assessment in blood and lumbar fluid during HIV-1 treatment interruption

Marie-Angélique De ScheerderClarissa Van HeckeHenrik ZetterbergDietmar FuchsNele De LangheSofie RutsaertBram VranckenWim TrypsteenYtse NoppeBeatrijs Van Der Gucht et al.

A1 Journal Article in JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

The elusive source of HIV-1 rebound after treatment interruption

Laurens LambrechtsBasiel ColeMarie-Angélique De ScheerderZoe BoyerYtse NoppeKatie FisherJohn-Sebastian EdenWim Van CriekingeLisa FrenkelSarah Palmer et al.

2019

Relationship between HIV-1 env sequences from rebound plasma virus and viral outgrowth

Basiel ColeMarie-Angélique De ScheerderPieter PannusSofie RutsaertYtse NoppeStéphane De WitSabine AllardGuido VanhamEric FlorenceLinos Vandekerckhove

2014

Myosins 1 and 6, myosin light chain kinase, actin and microtubules cooperate during antibody-mediated internalisation and trafficking of membrane-expressed viral antigens in feline infectious peritonitis virus infected monocytes

Hannah DewerchinLowiese DesmaretsYtse NoppeHans Nauwynck

A1 Journal Article in VETERINARY RESEARCH

2011

Characterization of antigenic regions in the porcine reproductive and respiratory syndrome virus by the use of peptide-specific serum antibodies

Merijn VanheeWander Van BreedamSarah CostersMarc GeldhofYtse NoppeHans Nauwynck

A1 Journal Article in VACCINE

Identification of non-neutralizing and neutralizing antigenic regions in PRRSV by the use of peptide-specific serum and antibodies

Merijn VanheeWander Van BreedamSarah CostersMarc GeldhofYtse NoppeHans Nauwynck