Research Explorer

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Researcher

Volodimir Olexiouk

Awards & Distinctions

19 Results

2021

MYCN-induced nucleolar stress drives an early senescence-like transcriptional program in hTERT-immortalized RPE cells

Sofia ZanottiSuzanne VanhauwaertChristophe Van NesteVolodimir OlexioukJolien Van LaereMarlies VerschuurenJoni Van der MeulenLiselot MusKaat DurinckLaurentijn Tilleman et al.

A1 Journal Article in SCIENTIFIC REPORTS

SOX11 as guardian of epigenetic plasticity in neuroblastoma

Bieke DecaestekerAmber LouwagieSiebe LoontiensSara De BrouwerCarolina de Carvalho NunesGeertrui DeneckerFanny De VloedLisa DepestelJuliette RoelsKaren Verboom et al.

The functional annotation and exploration the SOX11 enhanceosome

Amber LouwagieBieke DecaestekerLouis DelhayeEva D'haeneEric de Bony de LavergneVolodimir OlexioukSarah VergultRogier VersteegJan KosterJohan van Nes et al.

2020

A methodology for discovering novel brain-relevant peptides : combination of ribosome profiling and peptidomics

Ravi TharakanSimion KreimerCeereena Ubaida-MohienJoelle LavoieVolodimir OlexioukGerben MenschaertNicholas T. IngoliaRobert N. ColeKoko IshizukaAkira Sawa et al.

A1 Journal Article in NEUROSCIENCE RESEARCH

A novel TLX1-driven T-ALL zebrafish model : comparative genomic analysis with other leukemia models

Siebe LoontiensSuzanne VanhauwaertLisa DepestelGivani DewynWouter Van LoockeFinola E. MooreElaine G. GarciaLance BatchelorChiara BorgaBarbara Squiban et al.

A1 Journal Article in LEUKEMIA

BRAWNIN : a sORF-encoded peptide essential for vertebrate mitochondrial complex III assembly

Shan ZhangChao LiangCamille MaryBaptiste KerouantonJoel FranciscoNarendra Suhas JagannathanVolodimir OlexioukJih Hou PehClaire TangGio Fidelito et al.

Mitochondrial peptide BRAWNIN is essential for vertebrate respiratory complex III assembly

Shan ZhangBoris ReljićChao LiangBaptiste KerouantonJoel Celio FranciscoJih Hou PehCamille MaryNarendra Suhas JagannathanVolodimir OlexioukClaire Tang et al.

A1 Journal Article in NATURE COMMUNICATIONS

2019

A proteogenomic endeavour investigating the unexplored domain of putatively coding small open reading frames

Volodimir OlexioukWim Van CriekingeGerben Menschaert

MYCN activation in hTERT immortalized RPE cells as model for oncogene induced senescence

Sofia ZanottiBieke DecaestekerSuzanne VanhauwaertMichael D HogartyVolodimir OlexioukKaat DurinckWinnok De VosFranki Speleman

SOX11 as mediator of the adrenergic cell state in NB

Bieke DecaestekerAmber LouwagieSara De BrouwerVolodimir OlexioukGeertrui DeneckerCarolina de Carvalho NunesKaren VerboomMoritz GartlgruberWouter Van LoockeElena Afanasyeva et al.

SOX11 is a key epigenetic regulator in the adrenergic MYCN amplified neuroblastoma

Amber LouwagieBieke DecaestekerSara De BrouwerGeertrui DeneckerCarolina de Carvalho NunesVolodimir OlexioukKaren VerboomMoritz GartlgruberWouter Van LoockeElena Afanasyeva et al.

SOX11 is a key epigenetic regulator in the adrenergic MYCN amplified neuroblastoma

Amber LouwagieBieke DecaestekerCarolina de Carvalho NunesGeertrui DeneckerVolodimir OlexioukKaren VerboomMoritz GartlgruberWouter Van LoockeElena AfanasyevaPauline Depuydt et al.

2018

An update on sORFs.org : a repository of small ORFs identified by ribosome profiling

Volodimir OlexioukWim Van CriekingeGerben Menschaert

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Comprehensive peptide analysis of mouse brain striatum identifies novel sORF-encoded polypeptides

Harshavardhan BudamguntaVolodimir OlexioukWalter LuytenKarin SchildermansEvelyne MaesKurt BoonenGerben MenschaertGeert Baggerman

A1 Journal Article in PROTEOMICS

The proBAM and proBed standard formats : enabling a seamless integration of genomics and proteomics data

Gerben MenschaertXiaojing WangAndrew R JonesFawaz GhaliDavid FenyöVolodimir OlexioukBing ZhangEric W DeutschTobias TernentJuan Antonio Vizcaíno

A1 Journal Article in GENOME BIOLOGY

Using the sORFs.org database

Volodimir OlexioukGerben Menschaert

A2 Journal Article in CURRENT PROTOCOLS IN BIOINFORMATICS

2017

proBAMconvert : a conversion tool for proBAM/proBed

Volodimir OlexioukGerben Menschaert

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

2016

Identification of small novel coding sequences, a proteogenomic endeavor

Volodimir OlexioukGerben Menschaert

Bookchapter in Proteogenomics

2015

sORFs.org : a repository of small ORFs identified by ribosome profiling

Volodimir OlexioukJeroen CrappéSteven VerbruggenKenneth VerheggenLennart MartensGerben Menschaert

A1 Journal Article in NUCLEIC ACIDS RESEARCH