Research Explorer

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Researcher

Tom Beeckman

Publications & Research Data

Awards & Distinctions

305 Results

2026

Smoppix : unified nonparametric analysis of single-molecule spatial omics data using probabilistic indices

Stijn HawinkelXilan YangWard PoelmansHans MotteTom BeeckmanSteven Maere

A1 Journal Article in GENOME BIOLOGY

2025

From signal to storage : T6P-mediated control of root architecture and starch biosynthesis : trehalose-6-phosphate modulates SnRK1 and TOR signaling to control root development and starch metabolism

Stefania MoralesPatrick Van DijckTom Beeckman

Gaseous cues regenerate the periderm

Hassan IqbalChen YaningMuhammad WaqasTom BeeckmanÜlo NiinemetsChristoph-Martin Geilfus

Editorial material

High-throughput screening assay for nitrification inhibitors and the discovery of goitrin as a biological nitrification inhibitor

Fabian BeeckmanAndrzej DrozdzeckiAlexa De KnijfDominique AudenaertTom BeeckmanHans Motte

A1 Journal Article in JOURNAL OF MICROBIOLOGICAL METHODS

Improving nitrogen use efficiency for sustainable crop production: a chemical approach

Mirthe Van BuytenTom BeeckmanHans Motte

Marker-assisted in vivo imaging reveals prepatterning events prior to lateral root organogenesis

Hugues De GernierYuanming XieAsma DobWei XuanTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

The multifaceted role of auxin in root growth and branching : insights from non-seed vascular plants

Ward PoelmansTom BeeckmanAbdellah Lakehal

A1 Journal Article in PHYSIOLOGIA PLANTARUM

The selective estrogen receptor modulator clomiphene inhibits sterol biosynthesis in Arabidopsis thaliana

Qing WangKjell De VrieseSandrien DesmetRen WangMarkéta LuklováQianqian LiuJacob PollierQing LuSarah SchlagWalter Vetter et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2024

A nitrogen‐responsive cytokinin oxidase/dehydrogenase regulates root response to high ammonium in rice

Lun LiLetian JiaXingliang DuanYuanda LvChengyu YeChengqiang DingYuwen ZhangWeicong QiHans MotteTom Beeckman et al.

A1 Journal Article in NEW PHYTOLOGIST

A root cap-localized NAC transcription factor controls root halotropic response to salt stress in Arabidopsis

Lulu ZhengYongfeng HuTianzhao YangZhen WangDaoyuan WangLetian JiaYuanming XieLong LuoWeicong QiYuanda Lv et al.

A1 Journal Article in NATURE COMMUNICATIONS

Cell wall‐mediated maternal control of apical–basal patterning of the kelp Undaria pinnatifida

Eloise DriesYannick MeyersDaniel LiesnerFloriele GonzagaJakob BeckerEliane ZakkaTom BeeckmanSusana M. CoelhoOlivier De ClerckKenny Bogaert

A1 Journal Article in NEW PHYTOLOGIST

Enhancing agroecosystem nitrogen management : microbial insights for improved nitrification inhibition

Fabian BeeckmanLaure AnnettaMario Corrochano-MonsalveTom BeeckmanHans Motte

A1 Journal Article in TRENDS IN MICROBIOLOGY

High-throughput assays to identify archaea-targeting nitrification inhibitors

Fabian BeeckmanAndrzej DrozdzeckiAlexa De KnijfDominique AudenaertTom BeeckmanHans Motte

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Lateral root formation

Hugues De GernierKe XuTom Beeckman

Bookchapter in Plant roots : the hidden half

Mutation of AtPME2, a pH-dependent pectin methylesterase, affects cell wall structure and hypocotyl elongation

Ludivine HocqOlivier HabryloFabien SénéchalAline VoxeurCorinne Pau-RoblotJosip SafranFrançoise FournetSolène BassardVirginie BattuHervé Demailly et al.

A1 Journal Article in PLANT AND CELL PHYSIOLOGY

Nitrate and ammonium, the yin and yang of nitrogen uptake : a time-course transcriptomic study in rice

Pierre-Mathieu PélissierBoris ParizotLetian JiaAlexa De KnijfVera GoossensPascal GantetAntony ChampionDominique AudenaertWei XuanTom Beeckman et al.

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Plant roots : the hidden half

SnRK1/TOR/T6P : three musketeers guarding energy for root growth

Stefania MoralesM.J. PaulP. Van DijckTom Beeckman

A1 Journal Article in TRENDS IN PLANT SCIENCE

Structural and biochemical characterization of SmoPG1, an exo-polygalacturonase from Selaginella moellendorffii

Camille CartonJosip SafranAdrien LemaireJean-Marc DomonWard PoelmansTom BeeckmanFrancisco Ramos-MartínViviane AntoniettiPascal SonnetAnissa Lounès-Hadj Sahraoui et al.

A1 Journal Article in INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Unraveling nematode feeding site development in roots : one cell at a time

Melissa DeveuxMaite Saura SanchezA. Gomez RojasC. EscobarTom BeeckmanBert De RybelTina Kyndt

2023

ABCB‐mediated shootward auxin transport feeds into the root clock

Jian ChenYangjie HuPengchao HaoTashi TseringJian XiaYuqin ZhangOhad RothMaria NjoLieven SterckYun Hu et al.

A1 Journal Article in EMBO REPORTS

Characterization of ABCB-mediated auxin transport in root system architecture in Arabidopsis

Jian ChenTom BeeckmanSteffen Vanneste

Chemical induction of hypocotyl rooting reveals extensive conservation of auxin signalling controlling lateral and adventitious root formation

Yinwei ZengInge VerstraetenHoang Khai TrinhRobin LardonSébastien SchotteDamilola OlatunjiThomas HeugebaertChristian StevensMussa QuareshyRichard Napier et al.

A1 Journal Article in NEW PHYTOLOGIST

Chemical induction of hypocotyl rooting reveals extensive conservation of auxin signalling controlling lateral and adventitious root formation

Yinwei ZengInge VerstraetenHoang Khai TrinhRobin LardonSébastien SchotteDamilola OlatunjiThomas HeugebaertChristian StevensMussa QuareshyRichard Napier et al.

Drug discovery-based approach identifies new nitrification inhibitors

Fabian BeeckmanAndrzej DrozdzeckiAlexa De KnijfMario Corrochano-MonsalveSamuel BodéPieter BlomGeert GoeminneCarmen González-MuruaSebastian LückerPascal Boeckx et al.

A1 Journal Article in JOURNAL OF ENVIRONMENTAL MANAGEMENT

Dynamic GOLVEN-ROOT GROWTH FACTOR 1 INSENSITIVE signaling in the root cap mediates root gravitropism

Ke XuJoris JourquinXiangyu XuIve De SmetAna Fernandez SalinaTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

Exploration of the role of Ca2+ signaling and extracellular Ca2+ availability in endomembrane trafficking in Arabidopsis thaliana

Ren WangTom BeeckmanSteffen Vanneste

Genome and transcriptome of Selaginella kraussiana reveal evolution of root apical meristems in vascular plants

Wu LiuGui CaiNing ZhaiHua WangTengfei TangYuyun ZhangZhiyao ZhangLijun SunYijing ZhangTom Beeckman et al.

A1 Journal Article in CURRENT BIOLOGY

GH3‐mediated auxin inactivation attenuates multiple stages of lateral root development

Qing WangHugues De GernierXingliang DuanYuanming XieDanny GeelenKen‐ishiro HayashiWei XuanMarkus GeislerKirsten ten TusscherTom Beeckman et al.

A1 Journal Article in NEW PHYTOLOGIST

GOLVEN peptides regulate lateral root spacing as part of a negative feedback loop on the establishment of auxin maxima

Joris JourquinAna Fernandez SalinaQing WangKe XuJian ChenJan ŠimuraKarin LjungSteffen VannesteTom Beeckman

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Interspecies co‐expression analysis of lateral root development using inducible systems in rice, Medicago, and Arabidopsis

Hans MotteBoris ParizotWei XuanQian ChenSteven MaereSandra BensmihenTom Beeckman

A1 Journal Article in PLANT JOURNAL

Molecular insights into root evolution through the study of extant lycophytes

Xilan YangTom BeeckmanHans Motte

Phase separation-based visualization of protein-protein interactions and kinase activities in plants (vol 35, pg 3280, 2023)

Alaeddine SafiWouter SmaggheAmanda GonçalvesQing WangKe XuAna Fernandez SalinaBenjamin CappeFranck RiquetEvelien MylleDominique Eeckhout et al.

Phase separation-based visualization of protein-protein interactions and kinase activities in plants

Alaeddine SafiWouter SmaggheAmanda GonçalvesQing WangKe XuAna Fernandez SalinaBenjamin CappeFranck RiquetEvelien MylleDominique Eeckhout et al.

A1 Journal Article in PLANT CELL

Plastid-localized amino acid metabolism coordinates rice ammonium tolerance and nitrogen use efficiency

Yuanming XieYuanda LvLetian JiaLulu ZhengYonghui LiMing ZhuMengjun TianMing WangWeicong QiLong Luo et al.

A1 Journal Article in NATURE PLANTS

Spatial transcriptomics of a lycophyte root sheds light on root evolution

Xilan YangWard PoelmansCarolin SeyfferthAbdellah LakehalJulie PevernagieMichiel Van BelMaria NjoLin XuHilde NelissenBert De Rybel et al.

A1 Journal Article in CURRENT BIOLOGY

Specification and evolution of lateral roots

Abdellah LakehalAsma DobTom Beeckman

Editorial material

Structure–function study of a Ca2+-independent metacaspase involved in lateral root emergence

Simon StaelIgor SabljićDominique AudenaertThilde AnderssonLiana TsiatsianiRobert P. KumpfAndreu Vidal-AlbalatCecilia LindgrenDominique VercammenSilke Jacques et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Systematic dissection of auxin homeostasis mechanisms that control lateral root spacing

Qing WangTom BeeckmanSteffen Vanneste

The peptide signaling in plant, more than a ligand-receptor pairing story

Ke XuTom BeeckmanAna Fernandez Salina

Trehalose-6-phosphate signaling regulates lateral root formation in Arabidopsis thaliana

Stefania MoralesJoris JourquinFrederic CoppéLorena Lopez GalvisTom De SmetAlaeddine SafiMaria NjoCara A. GriffithsJohn D. SiddaJames S. O. Mccullagh et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2022

ABA represses TOR and root meristem activity through nuclear exit of the SnRK1 kinase

Borja Belda-PalazónPatricia Mónica Da Silva CostaTom BeeckmanFilip RollandElena Baena-González

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin analog-induced Ca 2+ signaling is not involved in inhibition of endosomal aggregation in Arabidopsis roots

Ren WangEllie HimschootMatteo GrenziJian ChenAlaeddine SafiMelanie KrebsKarin SchumacherMoritz NowackWolfgang MoederKeiko Yoshioka et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Auxin’s origin : do PILS hold the key?

Kenny BogaertJonas BlommeTom BeeckmanOlivier De Clerck

A1 Journal Article in TRENDS IN PLANT SCIENCE

Cellular and gene expression patterns associated with root bifurcation in Selaginella

Hans MotteTao FangBoris ParizotWouter SmetXilan YangWard PoelmansLiam WalkerMaria NjoGeorge W BasselTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

Communication is key : understanding how GLV peptide signaling regulates the initiation of lateral root organogenesis

Joris JourquinTom BeeckmanAna Fernandez Salina

Constitutive active CPK30 interferes with root growth and endomembrane trafficking in Arabidopsis thaliana

Ren WangEllie HimschootJian ChenMarie BoudsocqDanny GeelenJiří FrimlTom BeeckmanSteffen Vanneste

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Corrigendum : Constitutive active CPK30 interferes with root growth and endomembrane trafficking in Arabidopsis thaliana

Ren WangEllie HimschootJian ChenMarie BoudsocqDanny GeelenJiri FrimlTom BeeckmanSteffen Vanneste

CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice

Mathieu GoninKwanho JeongYoan CoudertJeremy LavarenneGiang Thi HoangMartine BesHuong Thi Mai ToMarie‐Rose Ndella ThiawToan Van DoDaniel Moukouanga et al.

A1 Journal Article in PLANT JOURNAL

Exploring the plant root response to various environment cues

Yuanming XieTom BeeckmanWei Xuan

Genetic variability of Arabidopsis thaliana mature root system architecture and genome-wide association study

Agnieszka Deja-MuylleDavy OpdenackerBoris ParizotHans MotteGuillaume LobetVeronique StormePieter ClauwMaria NjoTom Beeckman

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Hydraulic flux–responsive hormone redistribution determines root branching

Poonam MehraBipin K. PandeyDalia MelebariJason BandaNicola LeftleyValentin CouvreurJames RoweMoran AnfangHugues De GernierEmily Morris et al.

A1 Journal Article in SCIENCE

Phase separation to visualize protein interaction dynamics and post-translational modifications in planta

Alaeddine SafiWouter SmaggheAmanda GoncalvesBenjamin CappeFranck RiquetEvelyn MylleDaniël Van DammeDanny GeelenGeert De JaegerTom Beeckman et al.

Phase separation-based visualization of protein-protein interactions and kinase activities in plants

Alaeddine SafiWouter SmaggheAmanda GonçalvesKe XuAna Ibis FernandezBenjamin CappeFranck B. RiquetEvelien MylleDaniël Van DammeDanny Geelen et al.

Spatiotemporal development of suberized barriers in cork oak taproots

Ana Rita Mendes LealHelena SapetaTom BeeckmanPedro M BarrosM Margarida Oliveira

A1 Journal Article in TREE PHYSIOLOGY

The combined effect of heat and osmotic stress on suberization of Arabidopsis roots

Ana Rita Mendes LealJoana BeloTom BeeckmanPedro M. BarrosM. Margarida Oliveira

A1 Journal Article in CELLS

The phloem intercalated with xylem-correlated 3 receptor-like kinase constitutively interacts with brassinosteroid insensitive 1-associated receptor kinase 1 and is involved in vascular development in Arabidopsis

Ke XuJoris JourquinMaria NjoLong NguyenTom BeeckmanAna Fernandez Salina

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density

Sylwia Magdalena StrukLukas BraemCedrick MatthysAlan WaltonNick VangheluweStan Van PraetLingxiang JiangPawel Radoslaw BasterCarolien De CuyperFrançois-Didier Boyer et al.

A1 Journal Article in PLANT AND CELL PHYSIOLOGY

Translational profile of developing phellem cells in Arabidopsis thaliana roots

Ana Rita Mendes LealPedro Miguel BarrosBoris ParizotHelena SapetaNick VangheluweTonni Grube AndersenTom BeeckmanM. Margarida Oliveira

A1 Journal Article in PLANT JOURNAL

Two phylogenetically unrelated peptide‐receptor modules jointly regulate lateral root initiation via a partially shared signaling pathway in Arabidopsis thaliana

Joris JourquinAna Fernandez SalinaBoris ParizotKe XuWim GrunewaldAkihito MamiyaHidehiro FukakiTom Beeckman

A1 Journal Article in NEW PHYTOLOGIST

2021

A reflux-and-growth mechanism explains oscillatory patterning of lateral root branching sites

Thea van den BergKavya YalamanchiliHugues De GernierJoana Santos TeixeiraTom BeeckmanBen ScheresViola WillemsenKirsten ten Tusscher

A1 Journal Article in DEVELOPMENTAL CELL

An auxin-regulable oscillatory circuit drives the root clock in Arabidopsis

Juan Perianez-RodriguezMarcos RodriguezMarco MarconiEstefano Bustillo-AvendañoGuy WachsmanAlvaro Sanchez-CorrioneroHugues De GernierJavier CabreraPablo Perez-GarciaInmaculada Gude et al.

A1 Journal Article in SCIENCE ADVANCES

Auxin-regulated reversible inhibition of TMK1 signaling by MAKR2 modulates the dynamics of root gravitropism

Maria Mar Marquès-BuenoLaia ArmengotLise C. NoackJoseph BareilleLesia RodriguezMatthieu Pierre PlatreVincent BayleMengying LiuDavy OpdenackerSteffen Vanneste et al.

A1 Journal Article in CURRENT BIOLOGY

CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2 modulates auxin homeostasis and signaling

Sonhita ChakrabortyMasatsugu ToyotaWolfgang MoederKimberley ChinAlex FortunaMarc ChampignySteffen VannesteSimon GilroyTom BeeckmanEiji Nambara et al.

A1 Journal Article in PLANT PHYSIOLOGY

Dissecting cholesterol and phytosterol biosynthesis via mutants and inhibitors

Kjell De VrieseJacob PollierAlain GoossensTom BeeckmanSteffen Vanneste

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Early 'rootprints' of plant terrestrialization : Selaginella root development sheds light on root evolution in vascular plants

Tao FangHans MotteBoris ParizotTom Beeckman

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Histologic and molecular characterization of root phellem development and suberization : from Arabidopsis thaliana to Quercus suber

Ana Rita Mendes LealMargarida OliveiraTom Beeckman

Lateral root formation and nutrients : nitrogen in the spotlight

Pierre-Mathieu PélissierHans MotteTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

Lateral root initiation and the analysis of gene function using genome editing with CRISPR in Arabidopsis

Nick VangheluweTom Beeckman

A1 Journal Article in GENES

Modulation of Arabidopsis root growth by specialized triterpenes

Yuechen BaiPatricia Fernandez CalvoAndrés Ritter TraubAncheng C. HuangStefania MoralesKeylla BicalhoMichal KaradyLaurens PauwelsDieter BuystMaria Njo et al.

A1 Journal Article in NEW PHYTOLOGIST

Multimethod examination of Selaginella moellendorffii dichotomous root branching : an exploratory case study of plant root evolution

Tao FangTom Beeckman

Nature and nurture : genotype-dependent differential responses of root architecture to agar and soil environments

Merijn KerstensVera HesenKavya YalamanchiliAndrea BimboStephen GriggDavy OpdenackerTom BeeckmanRenze HeidstraViola Willemsen

A1 Journal Article in GENES

New inhibitors of ammonia-oxidizing microorganisms : mitigation of excessive nitrogen loss and climate change

Fabian BeeckmanTom Beeckman

Periodic root branching is influenced by light through an HY1-HY5-auxin pathway

Xingliang DuanSheng XuYuanming XieLun LiWeicong QiBoris ParizotYonghong ZhangTao ChenYi HanFrank Van Breusegem et al.

A1 Journal Article in CURRENT BIOLOGY

Pharmacological and genetic manipulations of Ca2+ signaling have contrasting effects on auxin-regulated trafficking

Ren WangEllie HimschootMatteo GrenziJian ChenMelanie KrebsKarin SchumacherMoritz NowackDaniël Van DammeIve De SmetTom Beeckman et al.

Plant signaling : interplay of brassinosteroids and auxin in root meristems

Wei XuanTom Beeckman

Editorial material

Seedling developmental defects upon blocking CINNAMATE‐4‐HYDROXYLASE are caused by perturbations in auxin transport

Ilias El HouariCaroline Van BeirsHelena ArentsHuibin HanAlexandra Alvarenga ChanocaDavy OpdenackerJacob PollierVeronique StormeWard SteenackersMussa Quareshy et al.

A1 Journal Article in NEW PHYTOLOGIST

Systems biology analysis of rice and Arabidopsis response to nitrate and ammonium : towards improving nitrogen use efficiency

Pierre-Mathieu PélissierTom Beeckman

The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators

Natalia NikonorovaEvan MurphyCássio Flávio Fonseca de LimaShanshuo ZhuBrigitte Van De CotteLam Dai VuDaria BalcerowiczLanxin LiXiangpei KongGieljan De Rop et al.

A1 Journal Article in CELLS

The development of crop root architecture and optimization of nutrition acquisition: the case of rice

Wei XuanYuanming XieTom Beeckman

Bookchapter in Understanding and improving crop root function

The for novel inhibitors of auxin-Induced Ca2+ signaling

Kjell De VrieseLong NguyenSimon StaelDominique AudenaertTom BeeckmanSteffen Vanneste

Bookchapter in Plant chemical genomics : methods and protocols

The mechanism of auxin transport in lateral root spacing

Jian ChenHugues De GernierAlaeddine SafiTom BeeckmanSteffen Vanneste

Editorial material

2020

A pHantastic ammonium response

Hans MotteTom Beeckman

Editorial material

An MAP kinase cascade downstream of RGF/GLV peptides and their RGI receptors regulates root development

Ana Fernandez SalinaTom Beeckman

Editorial material

Arabidopsis lectin EULS3 is involved in ABA signaling in roots

Malgorzata DubielTom BeeckmanGuy SmaggheEls Van Damme

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Exploiting natural variation in root system architecture via genome wide association studies

Agnieszka Deja-MuylleBoris ParizotHans MotteTom Beeckman

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

GOLVEN peptide signalling through RGI receptors and MPK6 restricts asymmetric cell division during lateral root initiation

Ana Fernandez SalinaNick VangheluweKe XuJoris JourquinLucas Alves Neubus ClausStefania MoralesBoris ParizotHugues De GernierQiaozhi YuAndrzej Drozdzecki et al.

A1 Journal Article in NATURE PLANTS

Overexpression of the NMig1 gene encoding a NudC domain protein enhances root growth and abiotic stress tolerance in Arabidopsis thaliana

Valentin VelinovIrina VasevaGrigor ZehirovMiroslava ZhiponovaMariana GeorgievaNick VangheluweTom BeeckmanValya Vassileva

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Peptide-receptor signaling controls lateral root development

Joris JourquinHidehiro FukakiTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

Pericyclic versus endodermal lateral roots : which came first?

Steffen VannesteTom Beeckman

Editorial material

Rice plants respond to ammonium‐stress by adopting a helical root growth pattern

Letian JiaYuanming XieZhen WangLong LuoChi ZhangPierre-Mathieu PélissierBoris ParizotWeicong QiJing ZhangZhubing Hu et al.

A1 Journal Article in PLANT JOURNAL

The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis

Stephanie SmithShanshuo ZhuLisa JoosIanto RobertsNatalia NikonorovaLam Dai VuElisabeth StesHyunwoo ChoAntoine LarrieuWei Xuan et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

The dynamic nature and regulation of the root clock

Wei XuanHugues De GernierTom Beeckman

A1 Journal Article in DEVELOPMENT

The evolutionary trajectory of root stem cells

Hans MotteBoris ParizotTao FangTom Beeckman

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

Unravelling lateral root initiation using genome editing in Arabidopsis

Nick VangheluweTom Beeckman

Unravelling the dynamics of lateral root pre-patterning processes in Arabidopsis

Hugues De GernierTom Beeckman

2019

Auxin function in the brown alga Dictyota dichotoma

Kenny BogaertLander BlommaertKarin LjungTom BeeckmanOlivier De Clerck

A1 Journal Article in PLANT PHYSIOLOGY

Cadmium stress suppresses lateral root formation by interfering with the root clock

Yuanming XieJiahui WangLulu ZhengYu WangLong LuoMingyue MaChi ZhangYi HanTom BeeckmanGuohua Xu et al.

A1 Journal Article in PLANT CELL AND ENVIRONMENT

CRISPR-TSKO : a technique for efficient mutagenesis in specific cell types, tissues, or organs in Arabidopsis

Ward DecaesteckerRafael Andrade BuonoMarie PfeifferNick VangheluweJoris JourquinMansour KarimiGert Van IsterdaelTom BeeckmanMoritz NowackThomas B. Jacobs

A1 Journal Article in PLANT CELL

EXPANSIN A1-mediated radial swelling of pericycle cells positions anticlinal cell divisions during lateral root initiation

Priya RamakrishnaPaola Ruiz DuarteGraham A RanceMartin SchubertVera VordermaierLam Dai VuEvan MurphyAmaya Vilches BarroKamal SwarupKamaljit Moirangthem et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of novel inhibitors of auxin-induced Ca2+ signaling via a plant-based chemical screen

Kjell De VrieseEllie HimschootKai DunserLong NguyenAndrzej DrozdzeckiAlex CostaMoritz NowackJurgen Kleine-VehnDominique AudenaertTom Beeckman et al.

A1 Journal Article in PLANT PHYSIOLOGY

Molecular and environmental regulation of root development

Hans MotteSteffen VannesteTom Beeckman

A1 Journal Article in Annual Review of Plant Biology

Root branching is not induced by auxins in Selaginella moellendorffii

Tao FangHans MotteBoris ParizotTom Beeckman

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Tackling plant phosphate starvation by the roots

Hanne CrombezHans MotteTom Beeckman

A1 Journal Article in DEVELOPMENTAL CELL

The evolution of root branching : increasing the level of plasticity

Hans MotteTom Beeckman

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

The road towards developing specific inhibitors of plant Ca2+ signaling and sterol biosynthesis

Kjell De VrieseSteffen VannesteTom Beeckman

Editorial material

TPX2-LIKE PROTEIN 3 is the primary activator of α-Aurora kinases and is essential for embryogenesis

Joanna BorucXing-Guang DengEvelien MylleNienke BesbruggeMatthias Van DurmeDmitri DemidovEva Dvorak TomastikovaTon-Reen Connie TanMichaël VandorpeDominique Eeckhout et al.

A1 Journal Article in PLANT PHYSIOLOGY

Unraveling a local inhibitory mechanism safeguarding regular lateral root spacing

Hugues De GernierTom Beeckman

Editorial material

2018

A novel role for Cyclic Nucleotide-Gated Ion Channel 2 (DND1) in auxin signaling

Sonhita ChakrabortyMasatsugu ToyotaWolfgang MoederKimberley ChinAlex FortunaMarc ChampignySteffen VannesteSimon GilroyTom BeeckmanKeiko Yoshioka

A spatiotemporal DNA endoploidy map of the Arabidopsis root reveals roles for the endocycle in root development and stress adaptation

Rahul BhosaleVéronique BoudolfFabiola Cuevas BustamanteRan LuThomas EekhoutZhubing HuGert Van IsterdaelGeorgina M LambertFan XuMoritz Nowack et al.

A1 Journal Article in PLANT CELL

Arabidopsis research requires a critical re-evaluation of genetic tools

Natalia NikonorovaKun YueTom BeeckmanIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Calcium ion dynamics in roots : imaging and analysis

Ellie HimschootMelanie KrebsAlex CostaTom BeeckmanSteffen Vanneste

Bookchapter in Root development : methods and protocols

Control of cell division orientation during vascular development in Arabidopsis thaliana

Wouter SmetTom BeeckmanDolf WeijersBert De Rybel

Long-term in vivo imaging of luciferase-based reporter gene expression in Arabidopsis roots

Wei XuanDavy OpdenackerSteffen VannesteTom Beeckman

Bookchapter in Root development : methods and protocols

Multi-parametric screening in Arabidopsis thaliana seedlings

Long NguyenAndrzej DrozdzeckiVera GoossensBert De RybelTom BeeckmanDominique Audenaert

Bookchapter in Plant chemical genomics : methods and protocols

Nitrification in agricultural soils : impact, actors and mitigation

Fabian BeeckmanHans MotteTom Beeckman

A1 Journal Article in CURRENT OPINION IN BIOTECHNOLOGY

Pharmacological strategies for manipulating plant Ca2+ signalling

Kjell De VrieseAlexandra CostantiniTom BeeckmanSteffen Vanneste

A1 Journal Article in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The role of calcium in auxin-regulated PIN endomembrane trafficking

Ellie HimschootTom BeeckmanSteffen Vanneste

The xerobranching response represses lateral root formation when roots are not in contact with water

Beata Orman-LigezaEmily C MorrisBoris ParizotTristan LavigneAurelie BabéAleksander LigezaStephanie KleinCraig SturrockWei XuanOndřey Novák et al.

A1 Journal Article in CURRENT BIOLOGY

2017

Alteration in auxin homeostasis and signaling by overexpression of PINOID kinase causes leaf growth defects in Arabidopsis thaliana

Kumud SainiMarios N MarkakisMalgorzata ZdanioDaria M BalcerowiczTom BeeckmanLieven De VeylderEls PrinsenGerrit TS BeemsterKris Vissenberg

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Dynamic control of lateral root positioning

Barbara MöllerWei XuanTom Beeckman

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

Egg activation-triggered shape change in the Dictyota dichotoma (Phaeophyceae) zygote is actin-myosin and secretion dependent

Kenny BogaertTom BeeckmanOlivier De Clerck

A1 Journal Article in ANNALS OF BOTANY

Phosphorylation of MAP65-1 by Arabidopsis Aurora kinases is required for efficient cell cycle progression

Joanna BorucAnnika WeimerVirginie Stoppin-MelletEvelien MylleKen KosetsuCesyen CedeñoMichel JaquinodMaria NjoLiesbeth De MildePeter Tompa et al.

A1 Journal Article in PLANT PHYSIOLOGY

PHR1 balances between nutrition and immunity in plants

Hans MotteTom Beeckman

Editorial material

Plant nitrogen nutrition : sensing and signaling

Wei XuanTom BeeckmanGuohua Xu

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

Two-step cell polarization in algal zygotes

Kenny BogaertTom BeeckmanOlivier De Clerck

A1 Journal Article in NATURE PLANTS

Understanding the physiology of strigolactones in Arabidopsis thaliana : a multi-angle approach

Cedrick MatthysSofie GoormachtigTom Beeckman

2016

Abiotic regulation of growth and fertility in the sporophyte of Dictyota dichotoma (Hudson) JV Lamouroux (Dictyotales, Phaeophyceae)

Kenny BogaertTom BeeckmanOlivier De Clerck

A1 Journal Article in JOURNAL OF APPLIED PHYCOLOGY

Aurora kinases throughout plant developoment

Annika WeimerDmitri DemidovInna LermontovaTom BeeckmanDaniël Van Damme

A1 Journal Article in TRENDS IN PLANT SCIENCE

CEP5 and XIP1/CEPR1 regulate lateral root initiation in Arabidopsis

Ianto RobertsStephanie SmithElisabeth StesBert De RybelAn StaesBrigitte Van De CotteMaria NjoLise DedeyneHans DemolJulien Lavenus et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Cyclic programmed cell death stimulates hormone signaling and root development in Arabidopsis

Wei XuanLeah R BandRobert KumpfDaniël Van DammeBoris ParizotGieljan De RopDavy OpdenackerBarbara MöllerNoemi SkorzinskiMaria Njo et al.

A1 Journal Article in SCIENCE

Identification of molecular components affecting root architecture

Ianto RobertsTom BeeckmanIve De Smet

Lateral root inducible system in Arabidopsis and maize

Hanne CrombezIanto RobertsNick VangheluweHans MotteLeentje JansenTom BeeckmanBoris Parizot

A1 Journal Article in JOVE-JOURNAL OF VISUALIZED EXPERIMENTS

PP2A-3 interacts with ACR4 and regulates formative cell division in the Arabidopsis root

Kun YuePriyanka SandalElisabeth L. WilliamsEvan MurphyElisabeth StesNatalia NikonorovaPriya RamakrishnaNathan CzyzewiczLaura Montero MoralesRobert Kumpf et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation

Evan MurphyLam Dai VuLisa Van den BroeckZhefeng LinPriya RamakrishnaBrigitte Van De CotteAllison GaudinierTatsuaki GohDaniel SlaneTom Beeckman et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

RBOH-mediated ROS production facilitates lateral root emergence in Arabidopsis

Beata Orman-LigezaBoris ParizotRiet De RyckeAna Fernandez SalinaEllie HimschootFrank Van BreusegemMalcolm J BennettClaire PérilleuxTom BeeckmanXavier Draye

A1 Journal Article in DEVELOPMENT

Strigolactones spatially influence lateral root development through the cytokinin signaling network

Lingxiang JiangCedrick MatthysBelen Marquez-GarciaCarolien De CuyperLien SmetAnnick De KeyserFrançois-Didier BoyerTom BeeckmanStephen DepuydtSofie Goormachtig

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

The SBT6.1 subtilase processes the GOLVEN1 peptide controlling cell elongation

Sarieh GhorbaniKurt HoogewijsTamara PecenkovaAna Fernandez SalinaAnnelies InzéDominique EeckhoutDorota KawaGeert De JaegerTom BeeckmanAnnemieke Madder et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2015

A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development

Qian ChenYang LiuSteven MaereEunkyoung LeeGert Van IsterdaelZidian XieWei XuanJessica LucasValya VassilevaSaeko Kitakura et al.

A1 Journal Article in NATURE COMMUNICATIONS

Calcium is an organizer of cell polarity in plants

Ellie HimschootTom BeeckmanJiri FrimlSteffen Vanneste

A1 Journal Article in BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Cell polarisation and asymmetric cell division using Dictyota dichotoma as a new experimental model

Kenny BogaertOlivier De ClerckTom Beeckman

Comparative study of molecular mechanisms underlying Arabidopsis and cereals root architecture

Beata Orman-LigezaXavier DrayeTom Beeckman

Cytokinin response factors regulate PIN-FORMED auxin transporters

Mária Braun ŠimáškováJose Antonio O'BrienMamoona KhanGiel Van NoordenKrisztina OtvosAnne VietenInge De ClercqJohanna Maria Adriana Van HaperenCandela CuestaKlára Hoyerová et al.

A1 Journal Article in NATURE COMMUNICATIONS

Ethylene-mediated regulation of A2-type CYCLINs modulates hyponastic growth in Arabidopsis

Joanna K PolkoJop A van RooijSteffen VannesteRonald PierikAnkie MH AmmerlaanMarleen H Vergeer-van EijkFionn McLoughlinKerstin GühlGert Van IsterdaelLaurentius ACJ Voesenek et al.

A1 Journal Article in PLANT PHYSIOLOGY

Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays

Sarieh GhorbaniYao-Cheng LinBoris ParizotAna Fernandez SalinaMaria NjoYves Van de PeerTom BeeckmanPierre Hilson

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Identification of interactors and downstream signaling of ACR4 controlling stem cell formative division in the Arabidopsis root

Kun YueTom BeeckmanIve De Smet

OsMADS26 negatively regulates resistance to pathogens and drought tolerance in rice

Giang Ngan KhongPratap Kumar PatiFrédérique RichaudBoris ParizotPrzemyslaw BidzinskiChung Duc MaiMartine BèsIsabelle BourriéDonaldo MeynardTom Beeckman et al.

A1 Journal Article in PLANT PHYSIOLOGY

Photopolarization of Fucus zygotes is determined by time sensitive vectorial addition of environmental cues during axis amplification

Kenny BogaertTom BeeckmanOlivier De Clerck

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Root cap-derived auxin pre-patterns the longitudinal axis of the Arabidopsis root

Wei XuanDominique AudenaertBoris ParizotBarbara MöllerMaria NjoBert De RybelGieljan De RopGert Van IsterdaelAri Pekka MähönenSteffen Vanneste et al.

A1 Journal Article in CURRENT BIOLOGY

The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation

Ana Fernandez SalinaAndrzej DrozdzeckiKurt HoogewijsValya VassilevaAnnemieke MadderTom BeeckmanPierre Hilson

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism

Hong-Zhe WangKe-Zhen YangJun-Jie ZouLing-Ling ZhuZi Dian XieMiyo Terao MoritaMasao TasakaJiri FrimlErich GrotewoldTom Beeckman et al.

A1 Journal Article in NATURE COMMUNICATIONS

Transverse sectioning of Arabidopsis thaliana leaves using resin embedding

Shweta KalveKumud SainiKris VissenbergTom BeeckmanGerrit Beemster

A2 Journal Article in BIO-PROTOCOL

2014

A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis

Céline SorinMarie DeclerckAurélie ChristThomas BleinLinnan MaChristine Lelandais-BrièreMaria NjoTom BeeckmanMartin CrespiCaroline Hartmann

A1 Journal Article in NEW PHYTOLOGIST

A new role for glutathione in the regulation of root architecture linked to strigolactones

Belen Marquez-GarciaMaria NjoTom BeeckmanSofie GoormachtigChristine H Foyer

A1 Journal Article in PLANT CELL AND ENVIRONMENT

A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development

Hyunwoo ChoHojin RyuSangchul RhoKristine HillStephanie SmithDominique AudenaertJoonghyuk ParkSoeun HanTom BeeckmanMalcolm J Bennett et al.

A1 Journal Article in NATURE CELL BIOLOGY

Arabidopsis NAC45/86 direct sieve element morphogenesis culminating in enucleation

Kaori Miyashima FurutaShri Ram YadavSatu LehesrantaIlya BelevichShunsuke MiyashimaJung-ok HeoAnne VaténOve LindgrenBert De RybelGert Van Isterdael et al.

A1 Journal Article in SCIENCE

Auxin transport and activity regulate stomatal patterning and development

Jie LeXu-Guang LiuKe-Zhen YangXiao-Lan ChenJun-Jie ZouHong-Zhe WangMing WangSteffen VannesteMiyo MoritaMasao Tasaka et al.

A1 Journal Article in NATURE COMMUNICATIONS

Cell-to-cell communication during lateral root development

Kun YueTom Beeckman

Editorial material

Fully automated compound screening in Arabidopsis thaliana seedlings

Dominique AudenaertLong NguyenBert De RybelTom Beeckman

Bookchapter in Plant chemical genomics : methods and protocols

Integration of growth and patterning during vascular tissue formation in Arabidopsis

Bert De RybelMilad AdibiAlice S BredaJos WendrichMargot E SmitOndřej NovákNobutoshi YamaguchiSaiko YoshidaGert Van IsterdaelJoakim Palovaara et al.

A1 Journal Article in SCIENCE

Tom BeeckmanIve De Smet

Editorial material

Plant signaling peptides, novel insights into their processing and role in root development

Sarieh GhorbaniTom BeeckmanPierre Hilson

Signaling peptides in plants

Sarieh GhorbaniAna Fernandez SalinaPierre HilsonTom Beeckman

A2 Journal Article in CELL & DEVELOPMENTAL BIOLOGY

The Arabidopsis root cap contributes to root branching by setting the root clock

Wei XuanTom Beeckman

The emerging role of reactive oxygen species signaling during lateral root development

Concepción ManzanoMerecedes Pallero-BaenaIlda CasimiroBert De RybelBeata Orman-LigezaGert Van IsterdaelTom BeeckmanXavier DrayePedro CaseroJuan C del Pozo

A1 Journal Article in PLANT PHYSIOLOGY

The interplay between auxin and the cell cycle during plant development

Marlies DemeulenaereTom Beeckman

Bookchapter in Auxin and its role in plant development

Three-dimensional patterns of cell division and expansion throughout the development of Arabidopsis thaliana leaves

Shweta KalveJoanna FotschkiTom BeeckmanKris VissenbergGerrit Beemster

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2013

Abscisic acid in root growth and development

Ive De SmetHanma Zhang

Bookchapter in Plant roots : the hidden half

Adventitious root induction in Arabidopsis thaliana as a model for in vitro root organogenesis

Inge VerstraetenTom BeeckmanDanny Geelen

Bookchapter in Plant organogenesis : methods and protocols

Auxin reflux between the endodermis and pericycle promotes lateral root initiation

Peter MarhavyMarleen VanstraelenBert De RybelZhaojun DingMalcolm J BennettTom BeeckmanEva Benkova

A1 Journal Article in EMBO JOURNAL

Chemical control of adventitious root organogenesis

Inge VerstraetenDanny GeelenTom Beeckman

Comparative transcriptomics as a tool for the identification of root branching genes in maize

Leentje JansenJens HollunderIanto RobertsCristian ForestanPhilippe FonteyneCharlotte Van QuickenborneRui-Guang ZhenBryan McKersieBoris ParizotTom Beeckman

A1 Journal Article in PLANT BIOTECHNOLOGY JOURNAL

Differences in dichogamy and herkogamy contribute to higher selfing in contrasting environments in the annual Blackstonia perfoliata (Gentianaceae)

Rein BrysBram GeensTom BeeckmanHans Jacquemyn

A1 Journal Article in ANNALS OF BOTANY

Endocytic regulation of brassinosteroid signalling in Arabidopsis thaliana

Simone Di RubboEugenia RussinovaTom Beeckman

Exploring endomembrane trafficking of BRASSINOSTEROID INSENSITIVE 1 in Arabidopsis

Mirela-Corina CodreanuEugenia RussinovaTom Beeckman

Genomics of root development

Boris ParizotTom Beeckman

Bookchapter in Root genomics and soil interactions

GOLVEN peptides as important regulatory signalling molecules of plant development

Ana Fernandez SalinaPierre HilsonTom Beeckman

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Inducible system for lateral roots in Arabidopsis thaliana and maize

Leentje JansenBoris ParizotTom Beeckman

Bookchapter in Plant organogenesis : methods and protocols

Lateral root development

Leentje JansenMarlies DemeulenaereTom Beeckman

Bookchapter in Plant roots : the hidden half

Lateral root development in Arabidopsis: fifty shades of auxin

Julien LavenusTatsuaki GohIanto RobertsSoazig Guyomarc'hMikael LucasIve De SmetHidehiro FukakiTom BeeckmanMalcolm BennettLaurent Laplaze

A1 Journal Article in TRENDS IN PLANT SCIENCE

Message in a bottle : small signalling peptide outputs during growth and development

Nathan CzyzewiczKun YueTom BeeckmanIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of the trehalase gene AtTRE1 leads to increased drought stress tolerance in Arabidopsis and is involved in abscisic acid-induced stomatal closure

Hilde Van HoutteLies VandesteeneLorena Lopez GalvisLiesbeth LemmensEwaut KisselSebastien CarpentierRegina FeilNelson AvonceTom BeeckmanJohn E Lunn et al.

A1 Journal Article in PLANT PHYSIOLOGY

Plant roots: the hidden half

Post-embryonic root organogenesis in cereals: branching out from model plants

Beata Orman-LigezaBoris ParizotPascal P GantetTom BeeckmanMalcolm J BennettXavier Draye

A1 Journal Article in TRENDS IN PLANT SCIENCE

Redundant and non-redundant roles of the trehalose-6-phosphate phosphatases in leave growth, root hair specification and energy-responses in Arabidopsis

Hilde Van HoutteLorena Lopez GalvisLies VandesteeneTom BeeckmanPatrick Van Dijck

A2 Journal Article in PLANT SIGNALING & BEHAVIOR

SCFTIR1/AFB-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism

Pawel Radoslaw BasterStephanie RobertJürgen Kleine-VehnSteffen VannesteUrszula KaniaWim GrunewaldBert De RybelTom BeeckmanJiri Friml

A1 Journal Article in EMBO JOURNAL

Sequential induction of auxin efflux and influx carriers regulates lateral root emergence

Benjamin PéretAlistair M MiddletonAndrew P FrenchAntoine LarrieuAnthony BishoppMaria NjoDarren M WellsSilvana PorcoNathan MellorLeah R Band et al.

A1 Journal Article in MOLECULAR SYSTEMS BIOLOGY

Small-molecule screens to study lateral root development

Dominique AudenaertBert De RybelLong NguyenTom Beeckman

Bookchapter in Plant organogenesis : methods and protocols

Synthetic molecules: helping to unravel plant signal transduction

Wei XuanEvan MurphyTom BeeckmanDominique AudenaertIve De Smet

A2 Journal Article in JOURNAL OF CHEMICAL BIOLOGY

The CEP family in land plants : evolutionary analyses, expression studies, and role in Arabidopsis shoot development

Ianto RobertsStephanie SmithBert De RybelJana Van den BroekeWouter SmetSarah De CokereMarieke MispelaereIve De SmetTom Beeckman

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Tightly controlled WRKY23 expression mediates Arabidopsis embryo development

Wim GrunewaldIve De SmetBert De RybelHelena RobertBrigitte Van De CotteViola WillemsenGodelieve GheysenDolf WeijersJiri FrimlTom Beeckman

A1 Journal Article in EMBO REPORTS

To branch or not to branch: the role of pre-patterning in lateral root formation

Jaimie M Van NormanWei XuanTom BeeckmanPhilip N Benfey

A1 Journal Article in DEVELOPMENT

Traffic control in the root: keeping root branching in check

Marleen VanstraelenTom Beeckman

Editorial material

Transcriptional and functional classification of the GOLVEN/ROOT GROWTH FACTOR/CLE-like signaling peptides reveals their role in lateral root and hair formation

Ana Fernandez SalinaAndrzej DrozdzeckiKurt HoogewijsAnh Thu NguyenTom BeeckmanAnnemieke MadderPierre Hilson

A1 Journal Article in PLANT PHYSIOLOGY

2012

A novel sensor to map auxin response and distribution at high spatio-temporal resolution

Geraldine BrunoudDarren M WellsMarina OlivaAntoine LarrieuVincent MirabetAmy H BurrowTom BeeckmanStefan KepinskiJan TraasMalcolm J Bennett et al.

A1 Journal Article in NATURE

A role for the root cap in root branching revealed by the non-auxin probe naxillin

Bert De RybelDominique AudenaertWei XuanPaul OvervoordeLucia C StraderStefan KepinskiRebecca HoyeRonald BrisboisBoris ParizotSteffen Vanneste et al.

A1 Journal Article in NATURE CHEMICAL BIOLOGY

Analyzing lateral root development : how to move forward

Ive De SmetPhilip J WhiteA Glyn BengoughLionel DupuyBoris ParizotIlda CasimiroRenze HeidstraMarta LaskowskiMarc LepetitFrank Hochholdinger et al.

A1 Journal Article in PLANT CELL

Auxin and epigenetic regulation of SKP2B, an F-box that represses lateral root formation

Concepción ManzanoElena Ramirez-ParraIlda CasimiroSofía OteroBénédicte DesvoyesBert De RybelTom BeeckmanPedro CaseroCrisanto GutierrezJuan C del Pozo

A1 Journal Article in PLANT PHYSIOLOGY

Expansive evolution of the TREHALOSE-6-PHOSPHATE PHOSPHATASE gene family in Arabidopsis

Lies VandesteeneLorena Lopez GalvisKevin VannesteRegina FeilSteven MaereWillem LammensFilip RollandJohn E LunnNelson AvonceTom Beeckman et al.

A1 Journal Article in PLANT PHYSIOLOGY

GOLVEN secretory peptides regulate auxin carrier turnover during plant gravitropic responses

Ryan WhitfordAna Fernandez SalinaRicardo Tejos UlloaAmparo Cuéllar PérezJürgen Kleine-VehnSteffen VannesteAndrzej DrozdzeckiJohannes LeitnerLindy AbasMaarten Aerts et al.

A1 Journal Article in DEVELOPMENTAL CELL

In silico analyses of pericycle cell populations reinforce their relation with associated vasculature in Arabidopsis

Boris ParizotIanto RobertsJeroen RaesTom BeeckmanIve De Smet

A1 Journal Article in PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phloem-associated auxin response maxima determine radial positioning of lateral roots in maize

Leentje JansenIanto RobertsRiet De RyckeTom Beeckman

A1 Journal Article in PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Plant developmental biologists meet on stairways in Matera

Tom BeeckmanJiri Friml

Editorial material

Plasma membrane calcium ATPases are important components of receptor-mediated signaling in plant immune responses and development

Nicolas Frei Dit FreyMalick MbengueMark KwaaitaalLisette NitschDenise AltenbachHeidrun HäwekerRosa Lozano-DuranMaria NjoTom BeeckmanBruno Huettel et al.

A1 Journal Article in PLANT PHYSIOLOGY

Repression of early lateral root initiation events by transient water deficit in barley and maize

Aurélie BabéTristan LavigneJean-Philippe SéverinKerstin A NagelAchim WalterFrançois ChaumontHenri BatokoTom BeeckmanXavier Draye

A1 Journal Article in PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism

Leah R BandDarren M WellsAntoine LarrieuJianyong SunAlistair M MiddletonAndrew P FrenchGéraldine BrunoudEthel Mendocilla SatoMichael H WilsonBenjamin Péret et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small-molecule dissection of brassinosteroid signaling

Mirela-Corina CodreanuDominique AudenaertLong NguyenTom BeeckmanEugenia Russinova

Bookchapter in Plant signalling networks : methods and protocols

Strigolactones are involved in root response to low phosphate conditions in Arabidopsis

Einav Mayzlish-GatiCarolien De CuyperSofie GoormachtigTom BeeckmanMarnik VuylstekePhilip B BrewerChristine A BeveridgeUri YermiyahuYulia KaplanYael Enzer et al.

A1 Journal Article in PLANT PHYSIOLOGY

Strigolactones suppress adventitious rooting in Arabidopsis and pea

Amanda RasmussenMichael Glenn MasonCarolien De CuyperPhilip B BrewerSilvia HeroldJavier AgustiDanny GeelenThomas GrebSofie GoormachtigTom Beeckman et al.

A1 Journal Article in PLANT PHYSIOLOGY

Tackling drought stress: RECEPTOR-LIKE KINASES present new approaches

Alex MarshallReidunn B AalenDominique AudenaertTom BeeckmanMartin R BroadleyMelinka A ButenkoAna I Caño-DelgadoSacco de VriesThomas DresselhausGeorg Felix et al.

A1 Journal Article in PLANT CELL

Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis

Wim GrunewaldIve De SmetDaniel R LewisChristian LöfkeLeentje JansenGeert GoeminneRobin Vanden BosscheMansour KarimiBert De RybelBartel Vanholme et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2011

A novel protein family mediates Casparian strip formation in the endodermis

Daniele RoppoloBert De RybelValérie Dénervaud TendonAlexandre PfisterJulien AlassimoneJoop EM VermeerMisako YamazakiYork-Dieter StierhofTom BeeckmanNiko Geldner

A1 Journal Article in NATURE

Arabidopsis α Aurora kinases function in formative cell division plane orientation

Daniël Van DammeBert De RybelGustavo GudesblatDmitri DemidovWim GrunewaldIve De SmetAndreas HoubenTom BeeckmanEugenia Russinova

A1 Journal Article in PLANT CELL

Asymmetric cell division in land plants and algae: the driving force for differentiation

Ive De SmetTom Beeckman

A1 Journal Article in NATURE REVIEWS MOLECULAR CELL BIOLOGY

Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins

Barbara BerckmansValya VassilevaStephan PC SchmidSara MaesBoris ParizotSatoshi NaramotoZoltan MagyarClaire Lessa Alvim KameiCsaba KonczLaszlo Bogre et al.

A1 Journal Article in PLANT CELL

Characterization of a family of Arabidopsis trehalose biosynthesis genes and their role in root development and stress tolerance

Lorena Lopez GalvisPatrick Van DijckTom Beeckman

Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis

Steffen VannesteFrederik CoppensEunKyoung LeeTyler J. DonnerZidian XieGert Van IsterdaelStijn DhondtFreya De WinterBert De RybelMarnik Vuylsteke et al.

A1 Journal Article in EMBO JOURNAL

Genetic and histological analysis of root branching in maize

Leentje JansenTom Beeckman

Model-based analysis of arabidopsis leaf epidermal cells reveals distinct division and expansion patterns for pavement and guard cells

Leila Kheibarshekan AslStijn DhondtVéronique BoudolfGerrit BeemsterTom BeeckmanDirk InzéWilly GovaertsLieven De Veylder

A1 Journal Article in PLANT PHYSIOLOGY

Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family

Elena BabiychukKlaas VandepoeleJosef WissingMiguel Garcia-DiazRiet De RyckeHana AkbariJérôme JoubèsTom BeeckmanLothar JänschMargrit Frentzen et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Strigolactones affect lateral root formation and root-hair elongation in Arabidopsis

Yaram KapulnikPierre-Marc DelauxNatalie ResnickEinav Mayzlish-GatiSmadar WiningerChaitali BhattacharyaNathalie Sejalon-DelmasJean-Philippe CombierGuillaume BécardEduard Belausov et al.

A1 Journal Article in PLANTA

Unraveling the evolution of auxin signaling

Ive De SmetUte VoßSteffen LauMichael WilsonNing ShaoRuth E TimmeRanjan SwarupIan KerrCharlie HodgmanRalph Bock et al.

A1 Journal Article in PLANT PHYSIOLOGY

2010

A novel Aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity

Bert De RybelValya VassilevaBoris ParizotMarlies DemeulenaereWim GrunewaldDominique AudenaertJelle Van CampenhoutPaul OvervoordeLeentje JansenSteffen Vanneste et al.

A1 Journal Article in CURRENT BIOLOGY

Auxin control of root development

Paul OvervoordeHidehiro FukakiTom Beeckman

A1 Journal Article in COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY

Bimodular auxin response controls organogenesis in Arabidopsis

Ive De SmetSteffen LauUte VossSteffen VannesteRené BenjaminsEike H RademacherAlexandra SchlerethBert De RybelValya VassilevaWim Grunewald et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyclin-dependent kinase activity maintains the shoot apical meristem cells in an undifferentiated state

Tarik GaamoucheCarmem-Lara de Oliveira ManesDorota KwiatkowskaBarbara BerckmansRachel KoumproglouSara MaesTom BeeckmanTeva VernouxJohn H DoonanJan Traas et al.

A1 Journal Article in PLANT JOURNAL

Nitrate contra auxin: nutrient sensing by roots

Tom BeeckmanJiri Friml

Editorial material

Root development

Leentje JansenBert De RybelValya VassilevaTom Beeckman

Bookchapter in Plant developmental biology : biotechnological perspectives

The roots of a new green revolution

Griet Den HerderGert Van IsterdaelTom BeeckmanIve De Smet

A1 Journal Article in TRENDS IN PLANT SCIENCE

VisuaLRTC: a new view on lateral root initiation by combining specific transcriptome data sets

Boris ParizotBert De RybelTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

2009

A chemical genetics approach to study early lateral root initiation in Arabidopsis thaliana

Bert De RybelTom BeeckmanDirk Inzé

Arabidopsis lateral root development: an emerging story

Benjamin PéretBert De RybelIlda CasimiroEva BenkovaRanjan SwarupLaurent LaplazeTom BeeckmanMalcolm Bennett

A1 Journal Article in Trends in Plant Science

Chemical inhibition of a subset of Arabidopsis thaliana GSK3-like kinases activates brassinosteroid signaling

Bert De RybelDominique AudenaertGrégory VertWilfried RozhonJuliane MayerhoferFrank PeelmanSilvie CoutuerTinneke DenayerLeentje JansenLong Nguyen et al.

A1 Journal Article in CHEMISTRY & BIOLOGY

Extensive expression regulation and lack of heterologous enzymatic activity of the Class II trehalose metabolism proteins from Arabidopsis thaliana

Matthew RamonIve De SmetLies VandesteeneMirande NaudtsBarbara LeymanPatrick Van DijckFilip RollandTom BeeckmanJohan M. Thevelein

A1 Journal Article in PLANT CELL AND ENVIRONMENT

Gene silencing induced by hairpin or inverted repeated sense transgenes varies among promoters and cell types

Gordana MarjanacMansour KarimiMirande NaudtsTom BeeckmanAnna DepickerSylvie De Buck

A1 Journal Article in NEW PHYTOLOGIST

Manipulation of auxin transport in plant roots during Rhizobium symbiosis and nematode parasitism

Wim GrunewaldGiel Van NoordenGert Van IsterdaelTom BeeckmanGodelieve GheysenUlrike Mathesius

A1 Journal Article in PLANT CELL

Ontwikkeling van wortelstelsels, de verborgen helft van planten: hoe microscopie licht brengt in de duisternis

Tom BeeckmanDominique AudenaertGiel Van NoordenBoris ParizotBert De RybelWim GrunewaldLeentje JansenLorena Lopez GalvisMirande NaudtsCharlotte Vanquickenborne et al.

Bookchapter in Micro, macro, mega : collectie Ocsinberg, keerpunt in de geschiedenis van de microscopie

Receptor-like kinases shape the plant

Ive De SmetUte VoßGerd JürgensTom Beeckman

A1 Journal Article in NATURE CELL BIOLOGY

Root development

Systematic analysis of cell-cycle gene expression during Arabidopsis development

Janice de Almeida EnglerLieven De VeylderRuth De GroodtStephane RombautsVéronique BoudolfBjörn De MeyerAdriana HemerlyPaulo FerreiraTom BeeckmanMansour Karimi et al.

A1 Journal Article in Plant Journal

The past, present, and future of chemical biology in auxin research

Bert De RybelDominique AudenaertTom BeeckmanStefan Kepinski

A1 Journal Article in ACS CHEMICAL BIOLOGY

2008

A role for AtWRKY23 in feeding site establishment of plant-parasitic nematodes

Wim GrunewaldMansour KarimiKrzysztof WieczorekElke Van de CappelleElisabeth WischnitzkiFlorian GrundlerDirk InzéTom BeeckmanGodelieve Gheysen

A1 Journal Article in PLANT PHYSIOLOGY

Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation

Boris ParizotLaurent LaplazeLilian RicaudElodie Boucheron-DubuissonVincent BayleMartin BonkeIve De SmetScott R PoethigYka HelariuttaJim Haseloff et al.

A1 Journal Article in PLANT PHYSIOLOGY

Flowering-time genes modulate meristem determinacy and growth form in Arabidopsis thaliana

Siegbert MelzerFrederic LensJerôme GennenSteffen VannesteAntje RohdeTom Beeckman

A1 Journal Article in NATURE GENETICS

Morph-ratio variation, population size and female reproductive success in distylous Pulmonaria officinalis (Boraginaceae)

Rein BrysH JacquemynTom Beeckman

A1 Journal Article in JOURNAL OF EVOLUTIONARY BIOLOGY

Pollen deposition rates and the functioning of distyly in the perennial Pulmonaria officinalis (Boraginaceae)

Rein BrysH JacquemynMartin HermyTom Beeckman

A1 Journal Article in PLANT SYSTEMATICS AND EVOLUTION

Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root

Ive De SmetValya VassilevaBert De RybelMitchell P LevesqueWim GrunewaldDaniël Van DammeGiel Van NoordenMirande NaudtsGert Van IsterdaelRebecca De Clercq et al.

A1 Journal Article in SCIENCE

The auxin influx carrier LAX3 promotes lateral root emergence

Kamal SwarupEva BenkovaRanjan SwarupIlda CasimiroBenjamin PéretYaodong YangGeraint ParryErik NielsenIve De SmetSteffen Vanneste et al.

A1 Journal Article in NATURE CELL BIOLOGY

WRKY23 gene dosage is crucial to attenuate both the SHR-and auxin-dependent signalling in the control of root stem cell specification and maintenance

Wim GrunewaldIve De SmetViola WillemsenDirk InzéGodelieve GheysenJiri FrimlTom Beeckman

2007

Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint

Kristof De SchutterJérôme JoubèsToon CoolsAurine VerkestFlorence CorellouElena BabiychukEls Van Der SchuerenTom BeeckmanSergei KushnirDirk Inzé et al.

A1 Journal Article in PLANT CELL

Auxin fuels the cell cycle engine during lateral root initiation

Steffen VannesteDirk InzéTom Beeckman

Bookchapter in Cell cycle control and plant development

Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis

Ive De SmetTakuya TetsumuraBert De RybelNicolas Frei dit FreyLaurent LaplazeIlda CasimiroRanjan SwarupMirande NaudtsSteffen VannesteDominique Audenaert et al.

A1 Journal Article in DEVELOPMENT

Cytokinins act directly on lateral root founder cells to inhibit root initiation

Laurent LaplazeEva BenkovaIlda CasimiroLies MaesSteffen VannesteRanjan SwarupDolf WeijersVanessa CalvoBoris ParizotMaria Begoña Herrera-Rodriguez et al.

A1 Journal Article in PLANT CELL

Developmental biology of roots: one common pathway for all angiosperms?

Wim GrunewaldBoris ParizotDirk InzéGodelieve GheysenTom Beeckman

A2 Journal Article in INTERNATIONAL JOURNAL OF PLANT DEVELOPMENTAL BIOLOGY

Ethylene regulates root growth through effects on auxin biosynthesis and transport-dependent auxin distribution

Kamil RuzickaKarin LjungSteffen VannesteRadka PodhorskáTom BeeckmanJiri FrimlEva Benkova

A1 Journal Article in PLANT CELL

The ins and outs of the plant cell cycle

Lieven De VeylderTom BeeckmanDirk Inzé

A1 Journal Article in NATURE REVIEWS MOLECULAR CELL BIOLOGY

Étude d'un déterminant de l'architecture racinaire chez Arabidopsis thaliana: l'identité des cellules du péricycle associées aux pôles de xylème

Boris ParizotLaurent NussaumeTom BeeckmanLaurent Laplaze

2006

A hormone and proteome approach to picturing the initial metabolic events during Plasmodiophora brassicae infection on Arabidopsis

Sylvie DevosKris LaukensPeter DeckersDominique Van Der StraetenTom BeeckmanDirk InzéHarry Van OnckelenErwin WittersEls Prinsen

A1 Journal Article in MOLECULAR PLANT-MICROBE INTERACTIONS

A novel role for abscisic acid emerges from underground

Ive De SmetHanma ZhangDirk InzéTom Beeckman

A1 Journal Article in TRENDS IN PLANT SCIENCE

Characterization of AtWRKY23, an Arabidopsis thaliana gene that is highly expressed in nematode induced feeding sites

Godelieve GheysenWim GrunewaldElke Van de CappelleMansour KarimiIve De SmetDirk InzéTom Beeckman

Functional analysis of a plant transcription factor that is highly upregulated upon nematode infection

Wim GrunewaldIve De SmetMansour KarimiGeert GoeminneKris Van PouckeBartel VanholmeDirk InzéTom BeeckmanGodelieve Gheysen

Lateral root initiation or the birth of a new meristem

Ive De SmetSteffen VannesteDirk InzéTom Beeckman

A1 Journal Article in PLANT MOLECULAR BIOLOGY

2005

Auxin regulation of cell cycle and its role during lateral root initiation

Steffen VannesteLies MaesIve De SmetKristiina HimanenMirande NaudtsDirk InzéTom Beeckman

A1 Journal Article in PHYSIOLOGIA PLANTARUM

Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana

Steffen VannesteBert De RybelGerrit BeemsterKarin LjungIve De SmetGert Van IsterdaelMirande NaudtsRyusuke IidaWilhelm GruissemMasao Tasaka et al.

A1 Journal Article in PLANT CELL

Functional redundancy of PIN proteins is accompanied by auxindependent cross-regulation of PIN expression

Anne VietenSteffen VannesteJustyna WiśniewskaEva BenkovaRené BenjaminsTom BeeckmanChristian LuschnigJiri Friml

A1 Journal Article in DEVELOPMENT

The cyclin-dependent kinase inhibitor KRP2 controls the onset of the endoreduplication cycle during Arabidopsis leaf development through inhibition of mitotic CDKA;1 kinase complexes

Aurine VerkestCarmem-Lara de Oliveira ManesSteven VercruysseSara MaesEls Van Der SchuerenTom BeeckmanPascal GenschikMartin KuiperDirk InzéLieven De Veylder

A1 Journal Article in PLANT CELL

WRKY23 regulates auxin distribution through activation of flavonoid biosynthesis

Wim GrunewaldIve De SmetSteffen VannesteMansour KarimiGeert GoeminneDirk InzéTom BeeckmanGodelieve Gheysen

2004

An easy and versatile embedding method for transverse sections

Ive De SmetPeter ChaerleSteffen VannesteRiet De RyckeDirk InzéTom Beeckman

A1 Journal Article in JOURNAL OF MICROSCOPY-OXFORD

B1-type cyclin-dependent kinases are essential for the formation of stomatal complexes in Arabidopsis thaliana

Véronique BoudolfRosa Maria BarrôcoJanice de Almeida EnglerAurine VerkestTom BeeckmanMirande NaudtsDirk InzéLieven De Veylder

A1 Journal Article in PLANT CELL

Disclosing the subterranean treasury of plants

A1 Journal Article in TRENDS IN BIOTECHNOLOGY

Phenotypic alterations in Arabidopsis thaliana plants caused by Rhodococcus fascians infection

Carmem-Lara de Oliveira ManesTom BeeckmanTita RitsemaMarc Van MontaguKoen GoethalsMarcella Holsters

A1 Journal Article in JOURNAL OF PLANT RESEARCH

Transcript profiling of early lateral root initiation

Kristiina HimanenMarnik VuylstekeSteffen VannesteSteven VercruysseElodie BoucheronPhilippe AlardD ChriquiMarc Van MontaguDirk InzéTom Beeckman

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

WRKY23, a member of the WRKY transcription factor family, is involved in root development

Wim GrunewaldMansour KarimiIve De SmetKris Van PouckeSteffen VannesteLies MaesTom BeeckmanGodelieve Gheysen

2003

An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis

Ive De SmetLaurent SignoraTom BeeckmanDirk InzéChristine H FoyerHanma Zhang

A1 Journal Article in PLANT JOURNAL

Changes in hydrogen peroxide homeostasis trigger an active cell death process in tobacco

James F DatRiikka PellinenTom BeeckmanBrigitte Van De CotteChristian LangebartelsJaakko KangasjärviDirk InzéFrank Van Breusegem

A1 Journal Article in PLANT JOURNAL

Dissecting Arabidopsis lateral root development

Ilda CasimiroTom BeeckmanNeil GrahamRishikesh BhaleraoHanma ZhangPedro CaseroGoran SandbergMalcolm J Bennett

A1 Journal Article in TRENDS IN PLANT SCIENCE

The Arabidopsis locus RCB mediates upstream regulation of mitotic gene expression

Kristiina HimanenChristophe ReuzeauTom BeeckmanSiegbert MelzerOlivier GrandjeanLiz CorbenDirk Inzé

A1 Journal Article in PLANT PHYSIOLOGY

WRKY23, a member of the WRKY transcription factor family, is induced by parasitic nematodes

Wim GrunewaldMansour KarimiIve De SmetTom BeeckmanGodelieve Gheysen

2002

Auxin-mediated cell cycle activation during early lateral root initiation

Kristiina HimanenElodie BoucheronSteffen VannesteJanice de Almeida EnglerDirk InzéTom Beeckman

A1 Journal Article in PLANT CELL

Control of proliferation, endoreduplication and differentiation by the Arabidopsis E2Fa-DPa transcription factor

Lieven De VeylderTom BeeckmanGerrit BeemsterJanice de Almeida EnglerSandra OrmeneseSara MaesMirande NaudtsEls Van Der SchuerenAnnie JacqmardGilbert Engler et al.

A1 Journal Article in EMBO JOURNAL

Genetic complexity of cellulose synthase A gene function in Arabidopsis embryogenesis

Tom BeeckmanGerhard KH PrzemeckGeorge StamatiouRachel LauNancy TerrynRiet De RyckeDirk InzéThomas Berleth

A1 Journal Article in PLANT PHYSIOLOGY

2001

Auxin transport promotes Arabidopsis lateral root initiation

Ilda CasimiroAlan MarchantRishikesh P BhaleraoTom BeeckmanSandra DhoogeRanjan SwarupNeil GrahamDirk InzéGoran SandbergPedro J Casero et al.

A1 Journal Article in PLANT CELL

CKS1At overexpression in Arabidopsis thaliana inhibits growth by reducing meristem size and inhibiting cell-cycle progression

Lieven De VeylderGerrit BeemsterTom BeeckmanDirk Inzé

A1 Journal Article in PLANT JOURNAL

Functional analysis of cyclin-dependent kinase inhibitors of Arabidopsis

Lieven De VeylderTom BeeckmanGerrit BeemsterLuc KrolsFranky TerrasIsabelle LandrieuEls Van Der SchuerenSara MaesMirande NaudtsDirk Inzé

A1 Journal Article in PLANT CELL

Molecular characterisation of Arabidopsis lines tagged with a promoterless gus gene

Mansour KarimiKris Van PouckeTom BeeckmanMarc Van MontaguGodelieve Gheysen

A4 Journal Article in MEDEDELINGEN VAN DE FACULTEIT LANDBOUWKUNDIGE EN TOEGEPASTE BIOLOGISCHE WETENSCHAPPEN, UNIVERSITEIT GENT

The peri-cell-cycle in Arabidopsis

Tom BeeckmanSylvia BurssensDirk Inzé

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2000

ABI3 affects plastid differentiation in dark-grown Arabidopsis seedlings

Antje RohdeRiet De RyckeTom BeeckmanGilbert EnglerMarc Van MontaguWout Boerjan

A1 Journal Article in PLANT CELL

Developmental expression of the Arabidopsis thaliana CycA2;1 gene

Sylvia BurssensJanice de Almeida EnglerTom BeeckmanCaroline RichardOrit ShaulPaulo FerreiraMarc Van MontaguDirk Inzé

A1 Journal Article in PLANTA

Embedding thin plant specimens for oriented sectioning

Tom BeeckmanRonnie Viane

A1 Journal Article in BIOTECHNIC & HISTOCHEMISTRY

Expression of cell cycle regulatory genes and morphological alterations in response to salt stress in Arabidopsis thaliana

Sylvia BurssensKristiina HimanenBrigitte Van De CotteTom BeeckmanMarc Van MontaguDirk InzéNathalie Verbruggen

A1 Journal Article in PLANTA

Histological study of seed coat development in Arabidopsis thaliana

Tom BeeckmanRiet De RyckeRonnie VianeDirk Inzé

A1 Journal Article in JOURNAL OF PLANT RESEARCH

Increased leakiness of the tetracycline-inducible Triple-Op promoter in dividing cells renders it unsuitable for high inducible levels of a dominant negative CDC2aAt gene

Lieven De VeylderTom BeeckmanMarc Van MontaguDirk Inzé

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

1999

Molecular regulation of the plant cell division cycle and plant growth regulation: the Arabidopsis thaliana root as a model system.

Gerrit BeemsterLieven De VeylderTom BeeckmanD PeelaersChristophe TréhinGerrit WestDominique Van Der StraetenTI BaskinDirk Inzé

1998

Accumulation pattern of IgG antibodies and Fab fragments in transgenic Arabidopsis thaliana plants

Chris De WildeRiet De RyckeTom BeeckmanMyriam De NeveMarc Van MontaguGilbert EnglerAnna Depicker

A1 Journal Article in PLANT AND CELL PHYSIOLOGY

The initiation of lateral roots in Arabidopsis thaliana (L. )

Sandra DhoogeTom BeeckmanC RedantRonnie VianeDirk Inzé

A4 Journal Article in BIOLOGISCH JAARBOEK [DODONAEA]

1997

Accumulation of secreted IgG antibody and Fab fragment in Arabidopsis thaliana and Nicotiana tabacum

Chris De WildeRiet De RyckeMyriam De NeveTom BeeckmanGeert De JaegerMarc Van MontaguGilbert EnglerAnna Depicker

Embryogenesis and root development in Arabidopsis thaliana (L.) Heynh. : an experimental approach using mutants and transgenic plants

Tom BeeckmanR. VianeD. Inzé

Genetic aspects of leaf development

Maria Van LijsebettensJonathan ClarkeRudy VanderhaeghenGerda CnopsMartine De BleeckereXuan WangTom BeeckmanMarc Van Montagu

1995

Bloemen, planten en platen, 18e eeuw tot heden

R VIANEK OTTENG DE BOCKTom BeeckmanChristine CocquytV STROSSEM CASTELEYNM CORNILLEL DEBERSAQUESF DE CONINCK et al.

superroot, a recessive mutation in Arabidopsis, confers auxin overproduction

Wout BoerjanMaría-Teresa CerveraMarianne DelarueTom BeeckmanWalter DewitteCatherine BelliniMichel CabocheHarry Van OnckelenMarc Van MontaguDirk Inzé

A1 Journal Article in PLANT CELL

1994

An easy technique for the clearing of histochemically stained plant tissue

Tom BeeckmanGilbert Engler

A2 Journal Article in PLANT MOLECULAR BIOLOGY REPORTER

1993

Effects of polyacrylamide and a fertilizer on germination and seedling growth of Ammophila arenaria (L.) Link, I: at 5% soil moisture content

P DanneelsTom BeeckmanWillem Van Cotthem

A4 Journal Article in BIOLOGISCH JAARBOEK [DODONAEA]

1992

Terracottem for vegetable cultivation: a pot experiment

P DanneelsTom BeeckmanK CallensWillem Van Cotthem

A4 Journal Article in BIOLOGISCH JAARBOEK [DODONAEA]

1989

Caulerpa section Sedoideae (Chlorophyta, Caulerpales) from the Kenyan coast

Eric CoppejansTom Beeckman

A1 Journal Article in NOVA HEDWIGIA