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Researcher
Tim De Meyer
Profile
Projects
Publications
Activities
Awards & Distinctions
143
Results
2023
A bioinformatics-driven exploration of the evolutionary (dis)advantages of epigenetics
Louis Coussement
Tim De Meyer
Wim Van Criekinge
Dissertation
2023
Dicer-like 3a mediates intergenerational resistance against root-knot nematodes in rice via hormone responses
Aniko Meijer
Mohammad Reza Atighi Quchan Atigh
Kristof Demeestere
Tim De Meyer
Klaas Vandepoele
Tina Kyndt
A1
Journal Article
in
PLANT PHYSIOLOGY
2023
Diproline-induced resistance to parasitic nematodes in the same and subsequent rice generations : roles of iron, nitric oxide and ethylene
Jonas De Kesel
Eli Bonneure
Michael Frei
Tim De Meyer
Sven Mangelinckx
Tina Kyndt
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2023
2022
Dehydroascorbate induces plant resistance in rice against root‐knot nematode Meloidogyne graminicola
Satish Chavan
Jonas De Kesel
Willem Desmedt
Eva Degroote
Richard Raj Singh
Giang Thanh Nguyen Thi
Kristof Demeestere
Tim De Meyer
Tina Kyndt
A1
Journal Article
in
MOLECULAR PLANT PATHOLOGY
2022
Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues
Aniko Meijer
Tim De Meyer
Klaas Vandepoele
Tina Kyndt
A1
Journal Article
in
BMC GENOMICS
2022
Trans-driven variation in expression is common among detoxification genes in the extreme generalist herbivore Tetranychus urticae
Andre Kurlovs
Berdien De Beer
Meiyuan Ji
Marilou Vandenhole
Tim De Meyer
René Feyereisen
Richard M. Clark
Thomas Van Leeuwen
A1
Journal Article
in
PLOS GENETICS
2022
Transcript- and annotation-guided genome assembly of the European starling
Katarina C. Stuart
Richard J. Edwards
Yuanyuan Cheng
Wesley C. Warren
David W. Burt
William B. Sherwin
Natalie R. Hofmeister
Scott J. Werner
Gregory F. Ball
Melissa Bateson
et al.
A1
Journal Article
in
MOLECULAR ECOLOGY RESOURCES
2022
2021
A hypomorphic mutant of PHD domain protein male meiocytes death 1
Bing Liu
Chunlian Jin
Nico De Storme
Sébastien Schotte
Cédric Schindfessel
Tim De Meyer
Danny Geelen
A1
Journal Article
in
GENES
2021
Chitin in strawberry cultivation : foliar growth and defense response promotion, but reduced fruit yield and disease resistance by nutrient imbalances
Caroline De Tender
Bart Vandecasteele
Bruno Verstraeten
Sarah Ommeslag
Tim De Meyer
Jill De Visscher
Peter Dawyndt
Lieven Clement
Tina Kyndt
Jane Debode
A1
Journal Article
in
MOLECULAR PLANT-MICROBE INTERACTIONS
2021
Clinically relevant aberrant Filip1l DNA methylation detected in a murine model of cutaneous squamous cell carcinoma
Kevin Roth
Louis Coussement
Elena V. Knatko
Maureen Higgins
Sandra Steyaert
Charlotte M. Proby
Tim De Meyer
Albena T. Dinkova-Kostova
A1
Journal Article
in
EBIOMEDICINE
2021
DNA methylation regulates transcription factor-specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon
Jolien Diddens
Louis Coussement
Carolina Frankl-Vilches
Gaurav Majumdar
Sandra Steyaert
Sita M. Ter Haar
Jeroen Galle
Ellen De Meester
Sarah De Keulenaer
Wim Van Criekinge
et al.
A1
Journal Article
in
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
2021
Genome-wide shifts in histone modifications at early stage of rice infection with Meloidogyne graminicola
Mohammad Atighi Quchan Atigh
Bruno Verstraeten
Tim De Meyer
Tina Kyndt
A1
Journal Article
in
MOLECULAR PLANT PATHOLOGY
2021
Identification of DNA methylation markers for early detection of CRC indicates a role for nervous system-related genes in CRC
Glenn Rademakers
Maartje Massen
Alexander Koch
Muriel X. Draht
Nikkie Buekers
Kim A. D. Wouters
Nathalie Vaes
Tim De Meyer
Beatriz Carvalho
Gerrit A. Meijer
et al.
A1
Journal Article
in
CLINICAL EPIGENETICS
2021
Insights into the interactions between rice and root-knot nematodes from an epigenetic perspective
Bruno Verstraeten
Tina Kyndt
Tim De Meyer
Dissertation
2021
Non-coding RNAs in the interaction between rice and Meloidogyne graminicola
Bruno Verstraeten
Mohammad Reza Atighi Quchan Atigh
Virginia Ruiz-Ferrer
Carolina Escobar
Tim De Meyer
Tina Kyndt
A1
Journal Article
in
BMC GENOMICS
2021
The RNA Atlas expands the catalog of human non-coding RNAs
Lucia Lorenzi
Hua-Sheng Chiu
Francisco Avila Cobos
Stephen Gross
Pieter-Jan Volders
Robrecht Cannoodt
Justine Nuytens
Katrien Vanderheyden
Jasper Anckaert
Steve Lefever
et al.
A1
Journal Article
in
NATURE BIOTECHNOLOGY
2021
The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)
Lucia Lorenzi
Hua-Sheng Chiu
Francisco Avila Cobos
Stephen Gross
Pieter-Jan Volders
Robrecht Cannoodt
Justine Nuytens
Katrien Vanderheyden
Jasper Anckaert
Steve Lefever
et al.
Correction
2021
The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments
Stephanie De Vos
Stephane Rombauts
Louis Coussement
Wannes Dermauw
Marnik Vuylsteke
Patrick Sorgeloos
James S. Clegg
Ziro Nambu
Filip Van Nieuwerburgh
Parisa Norouzitallab
et al.
A1
Journal Article
in
BMC GENOMICS
2021
2020
Chorismate mutase and isochorismatase, two potential effectors of the migratory nematode Hirschmanniella oryzae, increase host susceptibility by manipulating secondary metabolite content of rice
Lander Bauters
Tina Kyndt
Tim De Meyer
Kris Morreel
Wout Boerjan
Hannes Lefevere
Godelieve Gheysen
A1
Journal Article
in
MOLECULAR PLANT PATHOLOGY
2020
Exploring allele-specific expression mechanisms in health and disease
Tine Goovaerts
Tim De Meyer
Wim Van Criekinge
Dissertation
2020
Genome‐wide DNA hypomethylation shapes nematode pattern‐triggered immunity in plants
Mohammad Reza Atighi Quchan Atigh
Bruno Verstraeten
Tim De Meyer
Tina Kyndt
A1
Journal Article
in
NEW PHYTOLOGIST
2020
Molecular correlates of hypothalamic development in songbird ontogeny in comparison with the telencephalon
Gaurav Majumdar
Garima Yadav
Julie Hamaide
Louis Coussement
Tim De Meyer
Marleen Verhoye
Wim Vanden Berghe
Annemie Van der Linden
Jacques Balthazart
A1
Journal Article
in
FASEB JOURNAL
2020
Molecular insights into the compatible and incompatible interactions between sugar beet and the beet cyst nematode
Razieh Ghaemi
Ebrahim Pourjam
Naser Safaie
Bruno Verstraeten
Seyed Bagher Mahmoudi
Rahim Mehrabi
Tim De Meyer
Tina Kyndt
A1
Journal Article
in
BMC PLANT BIOLOGY
2020
Muscle strength is a major determinant of the blood pressure response to isometric stress testing : the Asklepios population study
Caroline Van daele
Julio Chirinos Medina
Tim De Meyer
Marc De Buyzere
Michel Langlois
Sofie Bekaert
Patrick Segers
Thierry Gillebert
Ernst Rietzschel
A1
Journal Article
in
JOURNAL OF HYPERTENSION
2020
Underestimated effect of intragenic HIV-1 DNA methylation on viral transcription in infected individuals
Sam Kint
Wim Trypsteen
Ward De Spiegelaere
Eva Malatinková
Sabine Kinloch-de Loes
Tim De Meyer
Wim Van Criekinge
Linos Vandekerckhove
A1
Journal Article
in
CLINICAL EPIGENETICS
2020
2019
DNA hypomethylation confers enhanced immunity against parasitic nematodes in rice
Mohammad Reza Atighi Quchan Atigh
Bruno Verstraeten
Tim De Meyer
Tina Kyndt
C3
Conference
2019
High SNP diversity in the non-toxic indigenous Jatropha curcas germplasm widens the potential of this upcoming major biofuel crop species
Katrien Vandepitte
Andreia Valdés-Rodríquez
Odilon Sánchez-Sánchez
Hanne De Kort
Jorge Martinez-Herrera
Eliseo García-Pérez
Tim De Meyer
Arturo Pérez-Vázquez
Bart Muys
Olivier Honnay
A1
Journal Article
in
ANNALS OF BOTANY
2019
MEXPRESS update 2019
Alexander Koch
Jana Jeschke
Wim Van Criekinge
Manon van Engeland
Tim De Meyer
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2019
Selection of miRNA reference genes for plant defence studies in rice (Oryza sativa)
Bruno Verstraeten
Lien De Smet
Tina Kyndt
Tim De Meyer
A1
Journal Article
in
PLANTA
2019
Targeted RNA-seq successfully identifies normal and pathogenic splicing events in breast/ovarian cancer susceptibility and Lynch syndrome genes
Rita D Brandão
Klaas Mensaert
Irene López-Perolio
Demis Tserpelis
Markos Xenakis
Vanessa Lattimore
Logan C Walker
Anders Kvist
Ana Vega
Sara Gutiérrez-Enríquez
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF CANCER
2019
The RNA Atlas, a single nucleotide resolution map of the human transcriptome
Lucia Lorenzi
Hua-Sheng Chiu
Francisco Avila Cobos
Stephen Gross
Pieter-Jan Volders
Robrecht Cannoodt
Justine Nuytens
Katrien Vanderheyden
Jasper Anckaert
Steve Lefever
et al.
Preprint
2019
The role of epigenetics in the interaction between rice and parasitic nematodes
Tina Kyndt
Mohammad Reza Atighi Quchan Atigh
Bruno Verstraeten
Aniko Meijer
Tim De Meyer
C3
Conference
2019
The role of ncRNAs in the interaction between root-knot nematode and rice
Bruno Verstraeten
Mohammad Reza Atighi Quchan Atigh
Tim De Meyer
Tina Kyndt
C3
Conference
2019
2018
A comprehensive overview of genomic imprinting in breast and its deregulation in cancer
Tine Goovaerts
Sandra Steyaert
Chari Vandenbussche
Jeroen Galle
Olivier Thas
Wim Van Criekinge
Tim De Meyer
A1
Journal Article
in
NATURE COMMUNICATIONS
2018
Analysis of DNA methylation in cancer : location revisited
Alexander Koch
Sophie C Joosten
Zheng Feng
Tim C de Ruijter
Muriel X Draht
Veerle Melotte
Kim M Smits
Jurgen Veeck
James G Herman
Leander Van Neste
et al.
A1
Journal Article
in
NATURE REVIEWS CLINICAL ONCOLOGY
2018
Body mass index is negatively associated with telomere length : a collaborative cross-sectional meta-analysis of 87 observational studies
Marij Gielen
Geja J Hageman
Evangelia E Antoniou
Katarina Nordfjall
Massimo Mangino
Muthuswamy Balasubramanyam
Tim De Meyer
Audrey E Hendricks
Erik J Giltay
Steven C Hunt
et al.
A1
Journal Article
in
AMERICAN JOURNAL OF CLINICAL NUTRITION
2018
Exploratory analysis of the human breast DNA methylation profile upon soymilk exposure
Louis Coussement
Selin Bolca
Wim Van Criekinge
Geert Trooskens
Klaas Mensaert
Katrien Poels
Nathalie Roche
Phillip Blondeel
Lode Godderis
Herman Depypere
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
Genome-wide analyses identify a role for SLC17A4 and AADAT in thyroid hormone regulation
Alexander Teumer
Layal Chaker
Stefan Groeneweg
Yong Li
Celia Di Munno
Caterina Barbieri
Ulla T Schultheiss
Michela Traglia
Tarunveer S Ahluwalia
Masato Akiyama
et al.
A1
Journal Article
in
NATURE COMMUNICATIONS
2018
Letter by De Meyer regarding article, 'Short leukocyte telomere length precedes clinical expression of atherosclerosis: the blood-and-muscle model'
Tim De Meyer
A1
Journal Article
in
CIRCULATION RESEARCH
2018
Leukocyte telomere length and diet in the apparently healthy, middle-aged Asklepios population
Tim De Meyer
Sofie Bekaert
Marc De Buyzere
Dirk De Bacquer
Michel Langlois
Nitin Shivappa
James R Hébert
Thierry Gillebert
Ernst Rietzschel
Inge Huybrechts
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
Reversal of aging-induced increases in aortic stiffness by targeting cytoskeletal protein-protein interfaces
Christopher J Nicholson
Kuldeep Singh
Robert J Saphirstein
Yuan Z Gao
Qian Li
Joanna G Chiu
Paul Leavis
Germaine C Verwoert
GF Mitchell
Tyrone Porter
et al.
A1
Journal Article
in
JOURNAL OF THE AMERICAN HEART ASSOCIATION
2018
Telomere length as cardiovascular aging biomarker
Tim De Meyer
Tim Nawrot
Sofie Bekaert
Marc De Buyzere
Ernst Rietzschel
Vicente Andrés
A1
Journal Article
in
JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY
2018
2017
A four-gene promoter methylation marker panel consisting of GREM1, NEURL, LAD1, and NEFH predicts survival of clear cell renal cell cancer patients
Iris JH van Vlodrop
Sophie C Joosten
Tim De Meyer
Kim M Smits
Leander Van Neste
Veerle Melotte
Marcella MLL Baldewijns
Leo J Schouten
Piet A van den Brandt
Jana Jeschke
et al.
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2017
Below-ground attack by the root knot nematode Meloidogyne graminicola predisposes rice to blast disease
Tina Kyndt
Henok Zemene Yimer
Ashley Haeck
Richard Raj Singh
David De Vleesschauwer
Simon Denil
Tim De Meyer
Monica Höfte
Kristof Demeestere
Godelieve Gheysen
A1
Journal Article
in
MOLECULAR PLANT-MICROBE INTERACTIONS
2017
Characterization of the methylome of a preclinical model of cutaneous squamous cell carcinoma identifies intronic hypermethylation of Filip1l, a novel tumour suppressor gene and Wnt signalling inhibitor
Kevin Roth
Elena V Knatko
Maureen Higgins
Tim De Meyer
Albena T Dinkova-Kostova
C3
Conference
2017
Decoy receptor 1 (DCR1) promoter hypermethylation and response to irinotecan in metastatic colorectal cancer
Linda JW Bosch
Geert Trooskens
Petur Snaebjornsson
Veerle MH Coupé
Sandra Mongera
Josien C Haan
Susan D Richman
Miriam Koopman
Jolien Tol
Tim De Meyer
et al.
A1
Journal Article
in
ONCOTARGET
2017
Epigenetic profiling in cancer
Geert Trooskens
Wim Van Criekinge
Tim De Meyer
Dissertation
2017
Epigenetic sampling effects : nephrectomy modifies the clear cell renal cell cancer methylome
Christophe Van Neste
Alexander Laird
Fiach O’Mahony
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
Thomas Powles
David J Harrison
Grant D Stewart
Tim De Meyer
A1
Journal Article
in
CELLULAR ONCOLOGY
2017
Epigenetica : heeft onze levensstijl impact op de gezondheid van onze kleinkinderen
Jana Asselman
Tim De Meyer
Tina Kyndt
Article in a magazine
2017
Methylome analysis of extreme chemoresponsive patients identifies novel markers of platinum sensitivity in high-grade serous ovarian cancer
Tushar Tomar
Nicolette G Alkema
Leroy Schreuder
Gert Jan Meersma
Tim De Meyer
Wim Van Criekinge
Harry G Klip
Heidi Fiegl
Els van Nieuwenhuysen
Ignace Vergote
et al.
A1
Journal Article
in
BMC MEDICINE
2017
Microbial community dynamics and response to plant growth-promoting microorganisms in the rhizosphere of four common food crops cultivated in hydroponics
Christopher Sheridan
P Depuydt
Madelena De Ro
Christophe Petit
Ellen Van Gysegem
Patricia Delaere
M Dixon
M Stasiak
SB Aciksöz
E Frossard
et al.
A1
Journal Article
in
MICROBIAL ECOLOGY
2017
Telomeres and atherosclerosis : the intricate pursuit of mechanistic insight through epidemiology
Tim De Meyer
Marc De Buyzere
Editorial material
2017
Virus detection in methylation-enriched DNA sequencing data
Klaas Mensaert
Tim De Meyer
Olivier Thas
Dissertation
2017
2016
A genome-wide search for epigenetically regulated genes in zebra finch using MethylCap-seq and RNA-seq
Sandra Steyaert
Jolien Diddens
Jeroen Galle
Ellen De Meester
Sarah De Keulenaer
Antje Bakker
Nina Sohnius-Wilhelmi
Carolina Frankl-Vilches
Annemie Van der Linden
Wim Van Criekinge
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2016
Developing bioinformatics applications for the analysis of epigenetic next-generation sequencing data
Sandra Steyaert
Tim De Meyer
Wim Van Criekinge
Wim Vanden Berghe
Dissertation
2016
Discovery of new methylation markers to improve screening for cervical intraepithelial neoplasia grade 2/3
A Boers
R Wang
RW van Leeuwen
HG Klip
GH de Bock
H Hollema
Wim Van Criekinge
Tim De Meyer
Simon Denil
AGJ van der Zee
et al.
A1
Journal Article
in
CLINICAL EPIGENETICS
2016
Dynamic epigenetic changes to VHL occur with sunitinib in metastatic clear cell renal cancer
Grant D Stewart
Thomas Powles
Christophe Van Neste
Alison Meynert
Fiach O'Mahony
Alexander Laird
Dieter Deforce
Filip Van Nieuwerburgh
Geert Trooskens
Wim Van Criekinge
et al.
A1
Journal Article
in
ONCOTARGET
2016
Genome-wide methylome analysis using MethylCap-seq uncovers 4 hypermethylated markers with high sensitivity for both adeno- and squamous-cell cervical carcinoma
Rong Wang
Robert W van Leeuwen
Aniek Boers
Harry G Klip
Tim De Meyer
Renske DM Steenbergen
Wim Van Criekinge
Ate GJ van der Zee
Ed Schuuring
G Bea A Wisman
A1
Journal Article
in
ONCOTARGET
2016
Identification and validation of WISP1 as an epigenetic regulator of metastasis in oral squamous cell carcinoma
Martijn JAM Clausen
Lieuwe J Melchers
Mirjam F Mastik
Lorian Slagter-Menkema
Harry JM Groen
Bernard FAM van der Laan
Wim Van Criekinge
Tim De Meyer
Simon Denil
G Bea A Wisman
et al.
A1
Journal Article
in
GENES CHROMOSOMES & CANCER
2016
Identification of long non-coding RNAs involved in neuronal development and intellectual disability
Eva D'haene
Eva Jacobs
Pieter-Jan Volders
Tim De Meyer
Björn Menten
Sarah Vergult
A1
Journal Article
in
SCIENTIFIC REPORTS
2016
Identification of long non-coding RNAs involved in neuronal development and intellectual disability
Eva D'haene
Eva Jacobs
Pieter-Jan Volders
Tim De Meyer
Björn Menten
Sarah Vergult
C3
Conference
2016
Locally advanced basal cell carcinoma has a distinct methylation and transcriptomic profile
Tjinta Brinkhuizen
Michel van Geel
Simon Denil
Tim De Meyer
Nicole WJ Kelleners-Smeets
Peter JFM Lohuis
Frank. JP Hoebers
Véronique JL Winnepenninckx
Maurice AM van Steensel
Klara Mosterd
A1
Journal Article
in
EXPERIMENTAL DERMATOLOGY
2016
Molecular and epigenetic features of melanomas and tumor immune microenvironment linked to durable remission to ipilimumab-based immunotherapy in metastatic patients
Teofila Seremet
Alexander Koch
Yanina Jansen
Max Schreuer
Sofie Wilgenhof
Véronique Del Marmol
Danielle Liènard
Kris Thielemans
Kelly Schats
Mark Kockx
et al.
A1
Journal Article
in
JOURNAL OF TRANSLATIONAL MEDICINE
2016
RAB25 expression is epigenetically downregulated in oral and oropharyngeal squamous cell carcinoma with lymph node metastasis
MJAM Clausen
LJ Melchers
MF Mastik
L Slagter-Menkema
HJM Groen
BFAM van der Laan
Wim Van Criekinge
Tim De Meyer
Simon Denil
B van der Vegt
et al.
A1
Journal Article
in
EPIGENETICS
2016
Telomeres and atherosclerosis : the attrition of an attractive hypothesis
Ernst Rietzschel
Sofie Bekaert
Tim De Meyer
Editorial material
2016
2015
Decreasing initial telomere length in humans intergenerationally understates age-associated telomere shortening
Brody Holohan
Tim De Meyer
Kimberly Batten
Massimo Mangino
Steven C Hunt
Sofie Bekaert
Marc De Buyzere
Ernst Rietzschel
Tim D Spector
Woodring E Wright
et al.
A1
Journal Article
in
AGING CELL
2015
Different approaches to measuring gene expression and DNA methylation and their application in cancer research
Alexander Koch
Wim Van Criekinge
Tim De Meyer
Gerben Menschaert
Dissertation
2015
Effect of sunitinib treatment on mutations and methylation in metastatic renal cancer
Grant Stewart
Christophe Van Neste
Alison Meynert
Colin Semple
Finch O'Mahony
Alexander Laird
Alan Mackay
Geert Trooskens
Wim Van Criekinge
Tim De Meyer
et al.
C3
Conference
2015
Epigenetic profiling of cardiovascular ageing
Simon Denil
Tim De Meyer
Wim Van Criekinge
Sofie Bekaert
Dissertation
2015
Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison
Tim De Meyer
Pierre Bady
Geert Trooskens
Sebastian Kurscheid
Jocelyne Bloch
Johan M Kros
Johannes A Hainfellner
Roger Stupp
Mauro Delorenzi
Monika E Hegi
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2015
Identification of a predictive signature based on immunohistochemical (IHC), RNA-seq and epigenetic profiling of melanoma metastases for response to ipilimumab-based immunotherapy
Teofila Seremet
Alexander Koch
Sofie Wilgenhof
Max Schreuer
Yanina Jansen
Danielle Lienard
Veronique Del Marmol
Kris Thielemans
Nicolas Van Baren
Pierre Coulie
et al.
C3
Conference
2015
Is Southern blotting necessary to measure telomere length reproducibly?: authors' response to: Commentary: The reliability of telomere length measurements
Carmen M Martin-Ruiz
Duncan Baird
Laureline Roger
Petra Boukamp
Damir Krunic
Richard Cawthon
Martin M Dokter
Pim Van Der Harst
Sofie Bekaert
Tim De Meyer
et al.
Editorial material
2015
MEXPRESS : visualizing expression, DNA methylation and clinical TCGA data
Alexander Koch
Tim De Meyer
Jana Jeschke
Wim Van Criekinge
A1
Journal Article
in
BMC GENOMICS
2015
Mining for viral fragments in methylation enriched sequencing data
Klaas Mensaert
Wim Van Criekinge
Olivier Thas
Ed Schuuring
Renske DM Steenbergen
G Bea A Wisman
Tim De Meyer
A1
Journal Article
in
FRONTIERS IN GENETICS
2015
PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration
Jeroen Crappé
Elvis Ndah
Alexander Koch
Sandra Steyaert
Daria Fijalkowska
Sarah De Keulenaer
Ellen De Meester
Tim De Meyer
Wim Van Criekinge
Petra Van Damme
et al.
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2015
Possible technical and biological explanations for the 'parental telomere length inheritance discrepancy' enigma
Tim De Meyer
Dan TA Eisenberg
A1
Journal Article
in
EUROPEAN JOURNAL OF HUMAN GENETICS
2015
Reproducibility of telomere length assessment : an international collaborative study
Carmen M Martin-Ruiz
Duncan Baird
Laureline Roger
Petra Boukamp
Damir Krunic
Richard Cawthon
Martin M Dokter
Pim van der Harst
Sofie Bekaert
Tim De Meyer
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY
2015
Reproducibility of telomere length assessment: authors' response to Damjan Krstajic and Ljubomir Buturovic
Carmen M Martin-Ruiz
Duncan Baird
Laureline Roger
Petra Boukamp
Damir Krunic
Richard Cawthon
Martin M Dokter
Pim Van der Harst
Sofie Bekaert
Tim De Meyer
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY
2015
2014
A non-genetic, epigenetic-like mechanism of telomere length inheritance?
Tim De Meyer
Katrien Vandepitte
Simon Denil
Marc De Buyzere
Ernst Rietzschel
Sofie Bekaert
A1
Journal Article
in
EUROPEAN JOURNAL OF HUMAN GENETICS
2014
Arterial stiffness and influences of the metabolic syndrome: a cross-countries study
Angelo Scuteri
Pedro G Cunha
E Agabiti Rosei
Jolita Badariere
Sofie Bekaert
John R Cockcroft
Jorge Cotter
Francesco Cucca
Marc De Buyzere
Tim De Meyer
et al.
A1
Journal Article
in
ATHEROSCLEROSIS
2014
Bacterial diversity assessment in Antarctic terrestrial and aquatic microbial mats : a comparison between bidirectional pyrosequencing and cultivation
Bjorn Tytgat
Elie Verleyen
Dagmar Obbels
Karolien Peeters
Aaike De Wever
Sofie D'hondt
Tim De Meyer
Wim Van Criekinge
Wim Vyverman
Anne Willems
A1
Journal Article
in
PLOS ONE
2014
Gender and telomere length: systematic review and meta-analysis
Michael Gardner
David Bann
Laura Wiley
Rachel Cooper
Rebecca Hardy
Dorothea Nitsch
Carmen Martin-Ruiz
Paul Shiels
Aavan Aihie Sayer
Michelangela Barbieri
et al.
A1
Journal Article
in
EXPERIMENTAL GERONTOLOGY
2014
Identification of novel genetic loci associated with thyroid peroxidase antibodies and clinical thyroid disease
Marco Medici
Eleonora Porcu
Giorgio Pistis
Alexander Teumer
Suzanne J Brown
Richard A Jensen
Rajesh Rawal
Greet Roef
Theo S Plantinga
Sita H Vermeulen
et al.
A1
Journal Article
in
PLOS GENETICS
2014
Next-generation technologies and data analytical approaches for epigenomics
Klaas Mensaert
Simon Denil
Geert Trooskens
Wim Van Criekinge
Olivier Thas
Tim De Meyer
A1
Journal Article
in
ENVIRONMENTAL AND MOLECULAR MUTAGENESIS
2014
On cross-sectional associations of leukocyte telomere length with cardiac systolic, diastolic and vascular function: the Asklepios study
Simon Denil
Ernst Rietzschel
Marc De Buyzere
Caroline Van daele
Patrick Segers
Dirk De Bacquer
Wim Van Criekinge
Sofie Bekaert
Thierry Gillebert
Tim De Meyer
A1
Journal Article
in
PLOS ONE
2014
Rapid genetic adaptation precedes the spread of an exotic plant species
Katrien Vandepitte
Tim De Meyer
Kenny Helsen
Kasper Van Acker
Isabel Roldán-Ruiz
Joachim Mergeay
Olivier Honnay
A1
Journal Article
in
MOLECULAR ECOLOGY
2014
SNP-guided identification of monoallelic DNA-methylation events from enrichment-based sequencing data
Sandra Steyaert
Wim Van Criekinge
Ayla De Paepe
Simon Denil
Klaas Mensaert
Katrien Vandepitte
Wim Vanden Berghe
Geert Trooskens
Tim De Meyer
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2014
Systemic suppression of the shoot metabolism upon rice root nematode infection
Tina Kyndt
Simon Denil
Lander Bauters
Wim Van Criekinge
Tim De Meyer
A1
Journal Article
in
PLOS ONE
2014
ViVar: a comprehensive platform for the analysis and visualization of structural genomic variation
Tom Sante
Sarah Vergult
Pieter-Jan Volders
Wigard P Kloosterman
Geert Trooskens
Katleen De Preter
Annelies Dheedene
Franki Speleman
Tim De Meyer
Björn Menten
A1
Journal Article
in
PLOS ONE
2014
2013
Addition of a novel, protective family history category allows better profiling of cardiovascular risk and atherosclerotic burden in the general population: the Asklepios study
Caroline Van daele
Tim De Meyer
Marc De Buyzere
Thierry Gillebert
Simon Denil
Sofie Bekaert
Julio Chirinos Medina
Patrick Segers
Gui De Backer
Dirk De Bacquer
et al.
A1
Journal Article
in
PLOS ONE
2013
Alterations of immune response of non-small lung cancer with azacytidine
John Wrangle
Wei Wang
Alexander Koch
Hariharan Easwaran
Helai P Mohammad
Frank Vendetti
Wim Van Criekinge
Tim De Meyer
Zhengzong Du
Princy Parsana
et al.
A1
Journal Article
in
ONCOTARGET
2013
An epigenomic next-generation sequencing approach to identify predictive markers for PARP inhibitor response in breast cancer cells
Tim De Meyer
Geert Trooskens
Mascha K Wibbe
Sebastian B Bartmann
Manon van Engeland
Wim Van Criekinge
Vivianne C Tjan-Heijnen
Ruth Knüchel
Jürgen Veeck
C3
Conference
2013
Associations between single nucleotide polymorphisms in thyroid hormone transporter genes (MCT8, MCT10 and OATP1C1) and circulating thyroid hormones
Greet Roef
Ernst Rietzschel
Tim De Meyer
Sofie Bekaert
Marc De Buyzere
Caroline Van daele
Kaatje Toye
Jean Kaufman
Youri Taes
A1
Journal Article
in
CLINICA CHIMICA ACTA
2013
Associations of rs4704397 in phosphodiesterase 8B with thyrotropin and thyroid hormone concentrations
Greet Roef
Ernst Rietzschel
Tim De Meyer
Sofie Bekaert
Marc De Buyzere
Jean Kaufman
Youri Taes
A1
Journal Article
in
THYROID
2013
Family history of cardiovascular disease and offspring echocardiographic left ventricular structure and function: the Asklepios study
Caroline Van daele
Tim De Meyer
Marc De Buyzere
Thierry Gillebert
Simon Denil
Sofie Bekaert
Julio Chirinos Medina
Gui De Backer
Dirk De Bacquer
Ernst Rietzschel
A1
Journal Article
in
JOURNAL OF THE AMERICAN SOCIETY OF ECHOCARDIOGRAPHY
2013
Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing
Tim De Meyer
Evi Mampaey
Michaël Vlemmix
Simon Denil
Geert Trooskens
Jean-Pierre Renard
Sarah De Keulenaer
Pierre Dehan
Gerben Menschaert
Wim Van Criekinge
A1
Journal Article
in
PLOS ONE
2013
SNP discovery using paired-end RAD-tag sequencing on pooled genomic DNA of Sisymbrium austriacum (Brassicaceae)
K Vandepitte
O Honnay
J Mergeay
P Breyne
Isabel Roldán-Ruiz
Tim De Meyer
A1
Journal Article
in
MOLECULAR ECOLOGY RESOURCES
2013
Staphylococcal enterotoxin B influences the DNA methylation pattern in nasal polyp tissue : a preliminary study
Claudina Perez Novo
Yuan Zhang
Simon Denil
Geert Trooskens
Tim De Meyer
Wim Van Criekinge
Paul Van Cauwenberge
Luo Zhang
Claus Bachert
A1
Journal Article
in
ALLERGY ASTHMA AND CLINICAL IMMUNOLOGY
2013
The CpG island methylator phenotype: what's in a name?
Laura AE Hughes
Veerle Melotte
Joachim De Schrijver
Michiel de Maat
Vincent THBM Smit
Judith VMG Bovée
Pim J French
Piet A van den Brandt
Leo J Schouten
Tim De Meyer
et al.
A1
Journal Article
in
CANCER RESEARCH
2013
The effect of VEGF-targeted therapy on biomarker expression in sequential tissue from patients with metastatic clear cell renal cancer
Kevin Sharpe
Grant D Stewart
Alan Mackay
Christophe Van Neste
Charlotte Rofe
Dan Berney
Irfan Kayani
Axel Bex
Elaine Wan
Fiach C O'Mahony
et al.
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2013
The impact of extensive clonal growth on fine-scale mating patterns: a full paternity analysis of a lily-of-the-valley population (Convallaria majalis)
Katrien Vandepitte
Tim De Meyer
Hans Jacquemyn
Isabel Roldán-Ruiz
Olivier Honnay
A1
Journal Article
in
ANNALS OF BOTANY
2013
Transcriptional analysis through RNA sequencing of giant cells induced by Meloidogyne graminicola in rice roots
Hongli Ji
Godelieve Gheysen
Simon Denil
Keith Lindsey
Jennifer F Topping
Kamrun Nahar
Annelies Haegeman
Winnok De Vos
Geert Trooskens
Wim Van Criekinge
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2013
2012
Common genetic variation in the 3'-BCL11B gene desert is associated with carotid-femoral pulse wave velocity and excess cardiovascular disease risk: the AortaGen Consortium
Gary F Mitchell
Germaine C Verwoert
Kirill V Tarasov
Aaron Isaacs
Albert V Smith
. Yasmin
Ernst Rietzschel
Toshiko Tanaka
Yongmei Liu
Afshin Parsa
et al.
A1
Journal Article
in
CIRCULATION-CARDIOVASCULAR GENETICS
2012
Low dose irradiation of thyroid cells reveals a unique transcriptomic and epigenetic signature in RET/PTC-positive cells
Khalil Abou-El-Ardat
Pieter Monsieurs
Nataša Anastasov
Mike Atkinson
Hanane Derradji
Tim De Meyer
Sofie Bekaert
Wim Van Criekinge
Sarah Baatout
A1
Journal Article
in
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
2012
No shorter telomeres in subjects with a family history of cardiovascular disease in the Asklepios Study
Tim De Meyer
Caroline Van daele
Marc De Buyzere
Simon Denil
Dirk De Bacquer
Patrick Segers
Luc Cooman
Gui De Backer
Thierry Gillebert
Sofie Bekaert
et al.
A1
Journal Article
in
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY
2012
Screening of soy and milk protein hydrolysates for their ability to activate the CCK1 receptor
Dorien Staljanssens
John Van Camp
Annelies Billiet
Tim De Meyer
Nadin Al Shukor
Winnok De Vos
Guy Smagghe
A1
Journal Article
in
PEPTIDES
2012
Transcriptional reprogramming by root knot and migratory nematode infection in rice
Tina Kyndt
Simon Denil
Annelies Haegeman
Geert Trooskens
Lander Bauters
Wim Van Criekinge
Tim De Meyer
Godelieve Gheysen
A1
Journal Article
in
NEW PHYTOLOGIST
2012
Transcriptome analysis of rice mature root tissue and root tips in early development by massive parallel sequencing
Tina Kyndt
Simon Denil
Annelies Haegeman
Geert Trooskens
Tim De Meyer
Wim Van Criekinge
Godelieve Gheysen
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2012
2011
A non-parametric method to assess the presence of significant DNA-methylation in enrichment-based NGS data
Klaas Mensaert
Geert Trooskens
Wim Van Criekinge
Olivier Thas
Tim De Meyer
C3
Conference
2011
Charting the methylome
Geert Trooskens
Tim De Meyer
Simon Denil
Wim Van Criekinge
C3
Conference
2011
Epigenetic, metabolic and signal transduction pathways involved in radiation response of normal and transformed thyrocytes
Khalil Abouelaradat
Wim Van Criekinge
Sarah Baatout
Tim De Meyer
Sofie Bekaert
Dissertation
2011
Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure
Louise V Wain
Germaine C Verwoert
Paul F O'Reilly
Gang Shi
Toby Johnson
Andrew D Johnson
Murielle Bochud
Kenneth M Rice
Peter Henneman
Albert V Smith
et al.
A1
Journal Article
in
NATURE GENETICS
2011
PROKAR‐SEQ: an analysis and visualization framework for next‐generation sequencing based quantification of prokaryotic communities
Joachim De Schrijver
Pieter-Jan Volders
Frederiek-Maarten Kerckhof
Dagmar Obbels
Elie Verleyen
Wim Vyverman
Tim De Meyer
Wim Van Criekinge
C3
Conference
2011
Response to low-dose X-irradiation is p53-dependent in a papillary thyroid carcinoma model system
Khalil Abou-El-Ardat
Hanane Derradji
Winnok De Vos
Tim De Meyer
Sofie Bekaert
Wim Van Criekinge
Sarah Baatout
A1
Journal Article
in
INTERNATIONAL JOURNAL OF ONCOLOGY
2011
Telomere length and cardiovascular aging: the means to the ends?
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
Wim Van Criekinge
Sofie Bekaert
A1
Journal Article
in
AGEING RESEARCH REVIEWS
2011
Telomere length integrates psychological factors in the successful aging story, but what about the biology?
Tim De Meyer
Editorial material
2011
2010
A variant at chromosome 9p21 is associated with recurrent myocardial infarction and cardiac death after acute coronary syndrome: the GRACE genetics study
Ian Buysschaert
Kathryn F Carruthers
Donald R Dunbar
Gilian Peuteman
Ernst Rietzschel
Ann Belmans
Ann Hedley
Tim De Meyer
Andrzej Budaj
Frans Van de Werf
et al.
A1
Journal Article
in
EUROPEAN HEART JOURNAL
2010
Evaluation of standard and advanced preprocessing methods for the univariate analysis of blood serum 1H-NMR spectra
Tim De Meyer
Davy Sinnaeve
Björn Van Gasse
Ernst Rietzschel
Marc De Buyzere
Michel Langlois
Sofie Bekaert
José Martins
Wim Van Criekinge
A1
Journal Article
in
ANALYTICAL AND BIOANALYTICAL CHEMISTRY
2010
Patterns of sex ratio variation and genetic diversity in the dioecious forest perennial Mercurialis perennis
Katrien Vandepitte
Olivier Honnay
Tim De Meyer
Hans Jacquemyn
Isabel Roldán-Ruiz
A1
Journal Article
in
PLANT ECOLOGY
2010
2009
Chromosome 9p21 Polymorphism Interacts With Waist-to-Hip Ratio in Carotid Plaque
Ian Buysschaert
Ernst Rietzschel
Natacha Lays
Bart Claes
Sofie Bekaert
Peter Verhamme
Patrick Segers
Tim De Meyer
Dirk De Bacquer
Thierry Gillebert
et al.
C3
Conference
2009
E2Fs mediate a fundamental cell-cycle deregulation in high-grade serous ovarian carcinomas
Tim De Meyer
Ingrid TGW Bijsmans
Koen Van de Vijver
Sofie Bekaert
Jan Oosting
Wim Van Criekinge
Manon van Engeland
Nathalie LG Sieben
A1
Journal Article
in
JOURNAL OF PATHOLOGY
2009
External X-irradiation causes a decrease in the proliferation of two papillary thyroid carcinoma cell lines with no significant increase in cell death
Khalil Abou-El-Ardat
Hanane Derradji
Sofie Bekaert
Tim De Meyer
Wim Van Criekinge
Sarah Baatout
C3
Conference
2009
High content analysis of human fibroblast cell cultures after exposure to space radiation
Birger Dieriks
Winnok De Vos
Geert Meesen
Kaat Van Oostveldt
Tim De Meyer
Myriam Ghardi
Sarah Baatout
Patric Van Oostveldt
A1
Journal Article
in
RADIATION RESEARCH
2009
Systemic telomere length and preclinical atherosclerosis : the Asklepios study
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
Michel Langlois
Dirk De Bacquer
Patrick Segers
PIET VAN DAMME
Gui De Backer
Patric Van Oostveldt
Wim Van Criekinge
et al.
A1
Journal Article
in
EUROPEAN HEART JOURNAL
2009
2008
De evaluatie van telomeerlengte als biomerker voor veroudering in de Asklepiosstudie
Tim De Meyer
Wim Van Criekinge
Dissertation
2008
Genrisk-T project: response of the TPC-1 papillary thyroid carcinoma cell line to a range of low to high doses of irradiation
K Abou-El-Ardat
H Derradji
Sofie Bekaert
Tim De Meyer
Wim Van Criekinge
S Baatout
A4
Journal Article
in
COMMUNICATIONS IN AGRICULTURAL AND APPLIED BIOLOGICAL SCIENCES
2008
Ionizing radiation-induced gene modulations, cytokine content changes and telomere shortening in mouse fetuses exhibiting forelimb defects
Hanane Derradji
Sofie Bekaert
Tim De Meyer
Paul Jacquet
Khalil Abouelaradat
Myriam Ghardi
Arlette Michaux
Sarah Baatout
A1
Journal Article
in
DEVELOPMENTAL BIOLOGY
2008
Lower red blood cell counts in middle-aged subjects with shorter peripheral blood leukocyte telomere length
Tim De Meyer
Marc De Buyzere
Michel Langlois
Ernst Rietzschel
Peter Cassiman
Dirk De Bacquer
Patric Van Oostveldt
Gui De Backer
Thierry Gillebert
Wim Van Criekinge
et al.
A1
Journal Article
in
AGING CELL
2008
NMR-based characterization of metabolic alterations in hypertension using an adaptive, intelligent binning algorithm
Tim De Meyer
Davy Sinnaeve
Björn Van Gasse
Elena Tsiporkova
Ernst Rietzschel
Marc De Buyzere
Thierry Gillebert
Sofie Bekaert
José Martins
Wim Van Criekinge
A1
Journal Article
in
ANALYTICAL CHEMISTRY
2008
PubMeth: a cancer methylation database combining text-mining and expert annotation
Maté Ongenaert
Leander Van Neste
Tim De Meyer
Gerben Menschaert
Sofie Bekaert
Wim Van Criekinge
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2008
Pubmeth: reviewed methylation database in cancer based on text-mining
Maté Ongenaert
Leander Van Neste
Tim De Meyer
Gerben Menschaert
Sofie Bekaert
Wim Van Criekinge
C1
Conference
2008
Studying telomeres in a longitudinal population based study
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
Wim Van Criekinge
Sofie Bekaert
A1
Journal Article
in
Frontiers in Bioscience
2008
Telomere biology in giant cell tumour of bone
Ramses Forsyth
Gitte De Boeck
Sofie Bekaert
Tim De Meyer
AHM Taminiau
Dirk Uyttendaele
Hendrik Roels
Marleen Praet
PCW Hogendoorn
A1
Journal Article
in
JOURNAL OF PATHOLOGY
2008
2007
Paternal age at birth is an important determinant of offspring telomere length
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
Dirk De Bacquer
Wim Van Criekinge
Gui De Backer
Thierry Gillebert
Patric Van Oostveldt
Sofie Bekaert
A1
Journal Article
in
HUMAN MOLECULAR GENETICS
2007
Telomere length and cardiovascular risk factors in a middle-aged population free of overt cardiovascular disease
Sofie Bekaert
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
Dirk De Bacquer
Michel Langlois
Patrick Segers
Luc Cooman
Piet Van Damme
Peter Cassiman
et al.
A1
Journal Article
in
AGING CELL
2007
2006
Reference values and basic determinants of telomere length in a large middle-aged population
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
Thierry Gillebert
Patric Van Oostveldt
Sofie Bekaert
C3
Conference
2006
2005
Telomere attrition as ageing biomarker
Sofie Bekaert
Tim De Meyer
Patric Van Oostveldt
A1
Journal Article
in
ANTICANCER RESEARCH
2005
Telomere length versus hormonal and bone mineral status in healthy elderly men
Sofie Bekaert
I Van Pottelbergh
Tim De Meyer
Hans-Georg Zmierczak
Jean Kaufman
Patric Van Oostveldt
Stefan Goemaere
A1
Journal Article
in
MECHANISMS OF AGEING AND DEVELOPMENT
2005
Telomere shortening is associated with malformation in p53-deficient mice after irradiation during specific stages of development
Sofie Bekaert
Hanane Derradji
Tim De Meyer
Arlette Michaux
Jasmine Buset
Mieke Neefs
Max Mergeay
Paul Jacquet
Patric Van Oostveldt
Sarah Baatout
A1
Journal Article
in
DNA REPAIR
2005
2004
Seizing human biological age
Sofie Bekaert
Tim De Meyer
Ernst Rietzschel
Marc De Buyzere
S BAATOUT
Thierry Gillebert
Patric Van Oostveldt
C1
Conference
2004
Sizing chromosome termini: a valuable biomarker in aging phenotypes
Sofie Bekaert
I VAN POTTELBERGH
Ernst Rietzschel
Tim De Meyer
Marc De Buyzere
Thierry Gillebert
Patric Van Oostveldt
C1
Conference
2004
Telomere attrition rate: a valuable biomarker in aging phenotypes
Sofie Bekaert
Ernst Rietzschel
Inge Van Pottelbergh
Stefan Goemaere
Tim De Meyer
Marc De Buyzere
Jean Kaufman
Thierry Gillebert
Patric Van Oostveldt
C3
Conference
2004
Telomere attrition rate: a valuable biomarker in aging phenotypes
Sofie Bekaert
Ernst Rietzschel
Inge Van Pottelbergh
Stefan Goemaere
Tim De Meyer
Marc De Buyzere
Jean Kaufman
Thierry Gillebert
Patric Van Oostveldt
C3
Conference
2004