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Researcher
Sofie De Maeseneire
Profile
Projects
Publications
Activities
Awards & Distinctions
128
Results
2024
A lock mass-independent workflow for comprehensive untargeted processing and mass realignment of AIMS data
Nicolas de Fooz
Marilyn De Graeve
Vera Plekhova
Pablo Vangeenderhuysen
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
Lynn Vanhaecke
C3
Conference
2024
Bubbling insights : unveiling the true sophorolipid biosynthetic pathway by Starmerella bombicola
Sophie Roelants
Stijn Bovijn
Elvira Bytyqi
Nicolas de Fooz
Goedele Luyten
Martijn Castelein
Thibo Van de Craen
Zhoujian Diao
Karolien Maes
Tom Delmulle
et al.
A1
Journal Article
in
BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS
2024
Genetic engineering of the yeast Starmerella bombicola for efficient production of biosurfactants from waste streams
Stijn Bovijn
Joana De Melo Martins
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2024
Revision of the sophorolipid biosynthetic pathway in Starmerella bombicola based on new insights in the substrate profile of its lactone esterase
Zhoujian Diao
Sophie Roelants
Goedele Luyten
Jan Goeman
Isabel Vandenberghe
Gonzalez Van Driessche
Sofie De Maeseneire
Wim Soetaert
Bart Devreese
A1
Journal Article
in
BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS
2024
Synthetic biology approaches for production of biosurfactants with the unconventional yeast Starmerella bombicola
Stijn Bovijn
Joana De Melo Martins
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2024
Whole genome-based comparative analysis of the genus Streptomyces reveals many misclassifications
Marieke Mispelaere
Anne-Sofie De Rop
Cedric Hermans
Sofie De Maeseneire
Wim Soetaert
Maarten De Mol
Paco Hulpiau
A1
Journal Article
in
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
2024
2023
Advancing ambient ionisation mass spectrometry towards at-line microbial fermentation monitoring
Nicolas de Fooz
Marilyn De Graeve
Pablo Vangeenderhuysen
Karolien Maes
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
Lynn Vanhaecke
C3
Conference
2023
An exploratory in silico comparison of codon harmonization tools
Thomas Willems
Wim Hectors
Jeltien Rombaut
Anne-Sofie De Rop
Stijn Goegebeur
Tom Delmulle
Maarten De Mol
Sofie De Maeseneire
Wim Soetaert
U
Conference
2023
An exploratory in silico comparison of open-source codon harmonization tools
Thomas Willems
Wim Hectors
Jeltien Rombaut
Anne-Sofie De Rop
Stijn Goegebeur
Tom Delmulle
Maarten De Mol
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
MICROBIAL CELL FACTORIES
2023
Comprehensive metabolomics reveals correlation between sophorolipid biosynthesis and autophagy
Sven Dierickx
Maximilien Souvereyns
Sophie Roelants
Marilyn De Graeve
Lieven Van Meulebroek
Sofie De Maeseneire
Wim Soetaert
Lynn Vanhaecke
A1
Journal Article
in
NEW BIOTECHNOLOGY
2023
Evaluation of long-term fermentation performance with engineered Saccharomyces cerevisiae strains
Maarten De Mol
Victoria Marcoen
Isabelle Maryns
Nico Snoeck
Joeri J. Beauprez
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
FERMENTATION-BASEL
2023
MariClus : your one-stop platform for information on marine natural products, their gene clusters and producing organisms
Cedric Hermans
Maarten De Mol
Marieke Mispelaere
Anne-Sofie De Rop
Jeltien Rombaut
Tesneem Nusayr
Rebecca Creamer
Sofie De Maeseneire
Wim Soetaert
Paco Hulpiau
A1
Journal Article
in
MARINE DRUGS
2023
SOAPbox : development of a set of advanced molecular parts for the sophorolipid producing yeast Starmerella bombicola
Goedele Luyten
Sofie Lodens
Elvira Bytyqi
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
C3
Conference
2023
Universal at-line microbial fermentation monitoring through advances in rapid ambient ionisation mass spectrometry-based metabolomics
Nicolas de Fooz
Marilyn De Graeve
Pablo Vangeenderhuysen
Karolien Maes
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
Lynn Vanhaecke
C3
Conference
2023
2022
A multi-omics study to boost continuous bolaform sophorolipid production
Sven Dierickx
Karolien Maes
Sophie Roelants
Beata Pomian
Lieven Van Meulebroek
Sofie De Maeseneire
Lynn Vanhaecke
Wim Soetaert
A1
Journal Article
in
NEW BIOTECHNOLOGY
2022
Discovery and structure elucidation of novel alkaloids from marine actinobacteria
Jeltien Rombaut
Anne-Sofie De Rop
Thomas Willems
Marilyn De Graeve
Lynn Vanhaecke
Paco Hulpiau
Sofie De Maeseneire
Maarten De Mol
Wim Soetaert
C3
Conference
2022
Finding the metabolic sweet spot : exploring post-transcriptional regulation and pathway balancing in yeast
Yatti De Nijs
Wim Soetaert
Sofie De Maeseneire
Dissertation
2022
From bumblebee to bioeconomy : recent developments and perspectives for sophorolipid biosynthesis
Sven Dierickx
Martijn Castelein
Jelle Remmery
Veerle De Clercq
Sofie Lodens
Niki Baccile
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
A1
Journal Article
in
BIOTECHNOLOGY ADVANCES
2022
Influence of nitrogen source on sophorolipid biosynthesis by Starmerella bombicola
Goedele Luyten
Elvira Bytyqi
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
C3
Conference
2022
New-to-nature biosurfactant production on waste-based feedstocks through process and strain development
Thibo Van de Craen
Stijn Bovijn
Karolien Maes
Sofie Lodens
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
C3
Conference
2022
Production and purification of bola glucosides by genetically engineered Starmerella bombicola
Goedele Luyten
Nicolas de Fooz
Jonas Van Hemelryck
Karolien Maes
Sofie Lodens
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
C3
Conference
2022
Sustainable production of microbial biosurfactants from 2nd generation feedstocks by strain- and process engineering
Stijn Bovijn
Thibo Van de Craen
Karolien Maes
Sofie Lodens
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
C3
Conference
2022
Valorisation of waste paper hydrolysates through sustainable 1,3-butanediol production by Cupriavidus necator
Wim Hectors
Sinah Tönjes
Evelien Uitterhaegen
Sofie De Maeseneire
Tom Delmulle
Wim Soetaert
C3
Conference
2022
2021
An interdisciplinary-omics study to boost continuous bolaform sophorolipid production
Sven Dierickx
Karolien Maes
Sophie Roelants
Lieven Van Meulebroek
Sofie De Maeseneire
Lynn Vanhaecke
Wim Soetaert
C3
Conference
2021
Elucidation of the natural function of sophorolipids produced by Starmerella bombicola
Veerle De Clercq
Sophie Roelants
Martijn Castelein
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
JOURNAL OF FUNGI
2021
Novel alkaloids from marine actinobacteria : discovery and characterization
Anne-Sofie De Rop
Jeltien Rombaut
Thomas Willems
Marilyn De Graeve
Lynn Vanhaecke
Paco Hulpiau
Sofie De Maeseneire
Maarten De Mol
Wim Soetaert
A1
Journal Article
in
MARINE DRUGS
2021
WASTE2FUNC : lactic acid and biosurfactants sourced from sustainable agricultural and industrial (food) WASTE feedstocks as novel FUNCtional ingredients for consumer products
Sofie Lodens
Sophie Roelants
Karolien Maes
Nicolas de Fooz
Thibaut Derycke
Muriel Dewilde
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2021
2020
5′ untranslated regions : the next regulatory sequence in yeast synthetic biology
Yatti De Nijs
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
BIOLOGICAL REVIEWS
2020
Alkaloids from marine fungi : promising antimicrobials
Thomas Willems
Maarten De Mol
Aleksandar De Bruycker
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
ANTIBIOTICS-BASEL
2020
An interdisciplinary -omics study to boost continuous bolaform sophorolipid production
Sven Dierickx
Karolien Maes
Sophie Roelants
Lieven Van Meulebroek
Sofie De Maeseneire
Lynn Vanhaecke
Wim Soetaert
C3
Conference
2020
Bridging the gap between drug discovery and synthetic biology : an alkaloid case study
Thomas Willems
Maarten De Mol
Jeltien Rombaut
Aleksandar De Bruycker
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2020
Comprehensive study on Escherichia coli genomic expression : does position really matter?
Anke Goormans
Nico Snoeck
Hannes Decadt
Karel Vermeulen
Gert Peters
Pieter Coussement
Dries Van Herpe
Joeri J. Beauprez
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
METABOLIC ENGINEERING
2020
Investigation of baker’s yeast production robustness
Maarten De Mol
Wim Hectors
Victoria Marcoen
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2020
Metabolomics meets white biotechnology : interdisciplinary approaches to resolve suboptimal biosurfactant production
Sven Dierickx
Sophie Roelants
Lieven Van Meulebroek
Sofie De Maeseneire
Wim Soetaert
Lynn Vanhaecke
C3
Conference
2020
Sophorolipids : the natural functions unravelled
Veerle De Clercq
Sophie Roelants
Martijn Castelein
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2020
Unraveling the regulation of sophorolipid biosynthesis in Starmerella bombicola
Sofie Lodens
Sophie Roelants
Goedele Luyten
Robin Geys
Pieter Coussement
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
FEMS YEAST RESEARCH
2020
Unravelling and resolving inefficient glucolipid biosurfactants production through quantitative multiomics analyses of Starmerella bombicola strains
Sofie Lodens
Sophie Roelants
Katarzyna Ciesielska
Robin Geys
Evelien Derynck
Karolien Maes
Filip Pattyn
Lisa Van Renterghem
Léopold Mottet
Sven Dierickx
et al.
A1
Journal Article
in
BIOTECHNOLOGY AND BIOENGINEERING
2020
Unravelling the transcriptional regulation of sophorolipid biosynthesis by Starmerella bombicola
Goedele Luyten
Sophie Roelants
Sofie De Maeseneire
Bart Devreese
Wim Soetaert
C3
Conference
2020
2019
A study of different co-localization strategies for the production of flavonoids in Saccharomyces cerevisiae
Tom Delmulle
Marjan De Mey
Sofie De Maeseneire
Dissertation
2019
Assessment of new microbial host parameters to improve the transition potential impact from laboratory to industrial scale fermentation
Maarten De Mol
Victoria Marcoen
Isabelle Maryns
Nico Snoeck
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2019
Characterization of the yeast Starmerella bombicola for the improved production of lipophilic compounds
Marilyn De Graeve
Wim Soetaert
Sophie Roelants
Sofie De Maeseneire
Dissertation
2019
Comprehensive study on Escherichia coli genomic expression : does position really matter?
Nico Snoeck
Anke Goormans
Hannes Decadt
Gert Peters
Pieter Coussement
Dries Van Herpe
Joeri Beauprez
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2019
Comprehensive study on Escherichia coli genomic expression : does position really matter?
Anke Goormans
Nico Snoeck
Hannes Decadt
Gert Peters
Pieter Coussement
Dries Van Herpe
Joeri Beauprez
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2019
Engineering yeast factories towards improved robustness
Maarten De Mol
Wim Soetaert
Sofie De Maeseneire
Dissertation
2019
Modulating transcription through development of semi-synthetic yeast core promoters
Thomas Decoene
Sofie De Maeseneire
Marjan De Mey
A1
Journal Article
in
PLOS ONE
2019
Production of long-chain hydroxy fatty acids by Starmerella bombicola
Marilyn De Graeve
Isabelle Van de Velde
Lien Saey
Maarten Chys
Hanne Oorts
Hümeyra Kahriman
Stein Mincke
Christian Stevens
Sofie De Maeseneire
Sophie Roelants
et al.
A1
Journal Article
in
FEMS YEAST RESEARCH
2019
Serine integrase recombinational engineering (SIRE) : a versatile toolbox for genome editing
Nico Snoeck
Maarten De Mol
Dries Van Herpe
Anke Goormans
Isabelle Maryns
Pieter Coussement
Gert Peters
Joeri Beauprez
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
BIOTECHNOLOGY AND BIOENGINEERING
2019
Unraveling and resolving inefficient glucolipid biosurfactants production through quantitative multiomics analyses of Starmerella bombicola strains
Sofie Lodens
Sophie Roelants
Katarzyna Ciesielska
Robin Geys
Evelien Derynck
Karolien Maes
Filip Pattyn
Lisa Van Renterghem
Léopold Mottet
Sven Dierickx
et al.
C3
Conference
2019
2018
Challenges in the microbial production of flavonoids
Tom Delmulle
Sofie De Maeseneire
Marjan De Mey
A1
Journal Article
in
PHYTOCHEMISTRY REVIEWS
2018
Development and application of a molecular toolkit for the biosurfactant chassis organism Starmerella bombicola
Sofie Lodens
Sophie Roelants
Katarzyna Ciesielska
Robin Geys
Pieter Coussement
Fiip Pattyn
Stijn Verweire
Lien Saey
Karen Saerens
Bart Devreese
et al.
C3
Conference
2018
Development and production of tailor-made biosurfactants
Roelants Sophie
Lisa Van Renterghem
Bernd Everaert
Emile Redant
Karolien Maes
Brecht Vanlerberghe
Sofie De Maeseneire
Wim Soetaert
C1
Conference
2018
Expanding the portfolio of synthetic biology tools in Saccharomyces cerevisiae for the optimization of heterologous production pathways at the transcriptional and translational level
Thomas Decoene
Marjan De Mey
Sofie De Maeseneire
Dissertation
2018
Hidden antibiotics : where to uncover?
Maarten De Mol
Nico Snoeck
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
BIOTECHNOLOGY ADVANCES
2018
Implementation of microbial host parameters to narrow the gap between laboratory and industrial conditions for baker’s yeast
Maarten De Mol
Victoria Marcoen
Isabelle Maryns
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2018
Increasing uniformity of biosurfactant production in Starmerella bombicola via the expression of chimeric cytochrome P450s
Robin Geys
Marilyn De Graeve
Sofie Lodens
Jeroen Van Malderen
Christophe Lemmens
Margaux De Smet
Stein Mincke
Inge Van Bogaert
Christian Stevens
Sofie De Maeseneire
et al.
A2
Journal Article
in
COLLOIDS AND INTERFACES
2018
Microbial biosurfactants : from lab to market
Sophie Roelants
Lisa Van Renterghem
Karolien Maes
Bernd Everaert
Emile Redant
Brecht Vanlerberghe
Sofie De Maeseneire
Wim Soetaert
Bookchapter
in
Microbial biosurfactants and their environmental and industrial applications
2018
Novel microbial host parameters to describe strain robustness and reduce the gap between laboratory and industrial conditions for baker's yeast
Maarten De Mol
Victoria Marcoen
Isabelle Maryns
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2018
Serine integrase recombinational engineering (SIRE) : a versatile toolbox for genome editing
Nico Snoeck
Maarten De Mol
Dries Van Herpe
Pieter Coussement
Gert Peters
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2018
Standardization in synthetic biology : an engineering discipline coming of age
Thomas Decoene
Brecht De Paepe
Jo Maertens
Pieter Coussement
Gert Peters
Sofie De Maeseneire
Marjan De Mey
A1
Journal Article
in
CRITICAL REVIEWS IN BIOTECHNOLOGY
2018
Starmerella bombicola, an industrially relevant, yet fundamentally underexplored yeast
Marilyn De Graeve
Sofie De Maeseneire
Sophie Roelants
Wim Soetaert
A1
Journal Article
in
FEMS YEAST RESEARCH
2018
Toward predictable 5′UTRs in Saccharomyces cerevisiae : development of a yUTR calculator
Thomas Decoene
Gert Peters
Sofie De Maeseneire
Marjan De Mey
A1
Journal Article
in
ACS SYNTHETIC BIOLOGY
2018
Transformation of an exotic yeast species into a platform organism : a case study for engineering glycolipid production in the yeast Starmerella bombicola
Sofie Lodens
Marilyn De Graeve
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
Bookchapter
in
Synthetic biology : methods and protocols
2018
Where to introduce genetic pathways into the genome of Saccharomyces cerevisiae?
Maarten De Mol
Victoria Marcoen
Isabelle Maryns
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2018
Yeast organelle engineering : a flavonoid case-study
Tom Delmulle
Sofie De Maeseneire
Marjan De Mey
C3
Conference
2018
2017
Co-localization of enzymes for improved production of flavonoids in Saccharomyces cerevisiae
Tom Delmulle
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2017
Comparative lipid analysis of the bio-surfactants producing yeast Starmerella bombicola
Marilyn De Graeve
Sophie Roelants
Sofie De Maeseneire
Inge Van Bogaert
Wim Soetaert
C3
Conference
2017
Development and application of a molecular toolkit for the biosurfactant chassis organism Starmerella bombicola
Sofie Lodens
Sophie Roelants
Katarzyna Ciesielska
Robin Geys
Pieter Coussement
Filip Pattyn
Stijn Verweire
Lien Saey
Karen Saerens
Bart Devreese
et al.
C3
Conference
2017
Development of an autonomous replicating plasmid for Starmerella bombicola
Marilyn De Graeve
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2017
Optimizing a protocol for protoplast fusion of Saccharomyces cerevisiae with highly osmophilic yeasts
Veerle De Clercq
Sofie De Maeseneire
Bart Devreese
Wim Soetaert
C3
Conference
2017
RNA stability engineering as a new synthetic biology tool in Saccharomyces cerevisiae
Yatti De Nijs
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2017
Serine integrases as a toolbox for genome editing
Nico Snoeck
Maarten De Mol
Dries Van Herpe
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2017
Towards predictable 5’-UTRs in Saccharomyces cerevisiae
Thomas Decoene
Gert Peters
Sofie De Maeseneire
Marjan De Mey
C3
Conference
2017
2016
An orthogonal transcription system for Saccharomyces cerevisiae
Maarten De Mol
Veerle De Clercq
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2016
Engineering transcription in S. cerevisiae through random assembly of an UAS library
Thomas Decoene
Nathalie Cuypers
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2016
High yield 1,3-propanediol production by rational engineering of the 3-hydroxypropionaldehyde bottleneck in Citrobacter werkmanii
Veerle Maervoet
Sofie De Maeseneire
Fatma Gizem Avcı
Joeri Beauprez
Wim Soetaert
Marjan De Mey
A1
Journal Article
in
MICROBIAL CELL FACTORIES
2016
Producing Pseudohyphozyma bogoriensis sophorolipids with Starmerella bombicola
Sofie Lodens
Sofie De Maeseneire
Silke Claus
Robin Geys
Sophie Roelants
Inge Van Bogaert
Wim Soetaert
C3
Conference
2016
Protein expression modulation in S. cerevisiae through random assembly of an UAS library
Thomas Decoene
Nathalie Cuypers
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2016
Synthetic protein scaffolds for flavonoid production in Saccharomyces cerevisiae
Tom Delmulle
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2016
Synthetic protein scaffolds for flavonoid production in Saccharomyces cerevisiae
Tom Delmulle
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2016
The use of auxotrophic selection markers in the yeast Starmerella bombicola
Isabelle Van de Velde
Inge Van Bogaert
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2016
Towards the industrialization of new biosurfactants: biotechnological opportunities for the lactone esterase gene from Starmerella bombicola
Sophie Roelants
Katarzyna Ciesielska
Sofie De Maeseneire
Helena Moens
Bernd Everaert
Stijn Verweire
Quenten Denon
Brecht Vanlerberghe
Inge Van Bogaert
Paul Van der Meeren
et al.
A1
Journal Article
in
BIOTECHNOLOGY AND BIOENGINEERING
2016
2015
Directional multipart in vivo assembly and genome integration using Saccharomyces cerevisiae
Maarten De Mol
Sofie De Maeseneire
Joeri Beauprez
Wim Soetaert
C3
Conference
2015
Elucidation of the biochemical pathway for detergent production in the yeast Rhodotorula bogoriensis
Sofie Lodens
Sofie De Maeseneire
Sophie Roelants
Robin Geys
Inge Van Bogaert
Wim Soetaert
C3
Conference
2015
Elucidation of the biochemical pathway for detergent production in the yeast Rhodotorula bogoriensis
Sofie Lodens
Sofie De Maeseneire
Sophie Roelants
Inge Van Bogaert
Wim Soetaert
C3
Conference
2015
Engineering eukaryotic transcription in yeast: towards the minimal core promoter
Thomas Decoene
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2015
2014
1,3-propanediol production with Citrobacter werkmanii DSM17579 : effect of a dhaD knock-out
Veerle Maervoet
Sofie De Maeseneire
Fatma Gizem Avcı
Joeri Beauprez
Wim Soetaert
Marjan De Mey
A1
Journal Article
in
MICROBIAL CELL FACTORIES
2014
A balancing act: building the aurone pathway in Saccharomyces cerevisiae
Thomas Decoene
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2014
Assembly and optimization of synthetic pathways in Saccharomyces cerevisiae: aurones as case study
Thomas Decoene
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2014
Assembly and optimization of synthetic pathways in Saccharomyces cerevisiae: aurones as case study
Thomas Decoene
Marjan De Mey
Sofie De Maeseneire
C3
Conference
2014
Biosurfactant gene clusters in eukaryotes: regulation and biotechnological potential
Sophie Roelants
Sofie De Maeseneire
Katarzyna Ciesielska
Inge Van Bogaert
Wim Soetaert
A1
Journal Article
in
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
2014
Metabolic engineering @ Inbio.be : platform tools and technologies for the production of complex metabolites
Sofie De Maeseneire
Jo Maertens
Marjan De Mey
C3
Conference
2014
Promotor screening with reporter proteins for the yeast Starmerella bombicola
Robin Geys
Sophie Roelants
Sofie De Maeseneire
Wim Soetaert
C3
Conference
2014
Unraveling the dha cluster in Citrobacter werkmanii: comparative genomic analysis of bacterial 1,3-propanediol biosynthesis clusters
Veerle Maervoet
Sofie De Maeseneire
Wim Soetaert
Marjan De Mey
A1
Journal Article
in
BIOPROCESS AND BIOSYSTEMS ENGINEERING
2014
2013
Candida bombicola as a platform organism for the production of tailor-made biomolecules
Sophie Roelants
Karen Saerens
Thibaut Derycke
Bing Li
Yao-Cheng Lin
Yves Van de Peer
Sofie De Maeseneire
Inge Van Bogaert
Wim Soetaert
A1
Journal Article
in
BIOTECHNOLOGY AND BIOENGINEERING
2013
Library construction in Pichia pastoris for engineering proteins
Magali Tanghe
Barbara Danneels
Sofie De Maeseneire
Tom Desmet
C3
Conference
2013
2012
Citrobacter werkmanii, a new candidate for the production of 1,3-propanediol: strain selection and carbon source optimization
Veerle Maervoet
Joeri Beauprez
Sofie De Maeseneire
Wim Soetaert
Marjan De Mey
A1
Journal Article
in
GREEN CHEMISTRY
2012
Comparison of colony PCR methods for yeast
Sofie De Maeseneire
Wim Soetaert
Marjan De Mey
C3
Conference
2012
Development of a reporter system for the platform organism Candida bombicola
Sofie De Maeseneire
Sophie Roelants
Lien Saey
Krystle De Preester
Inge Van Bogaert
Wim Soetaert
C3
Conference
2012
In vivo production of specialty carbohydrates: a metabolic engineering and synthetic biology approach
Joeri Beauprez
Jo Maertens
Gaspard Lequeux
Sofie De Maeseneire
Hendrik Waegeman
Pieter Coussement
Frederik De Bruyn
Marjan De Mey
Wim Soetaert
C3
Conference
2012
Monitoring the intracellular pH of Zygosaccharomyces bailii by green fluorescent protein
Trung Dang
Sofie De Maeseneire
Baoyu Zhang
Winnok De Vos
Andreja Rajkovic
An Vermeulen
JF Van Impe
Frank Devlieghere
A1
Journal Article
in
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
2012
2011
Enhancing the microbial conversion of glycerol to 1,3-propanediol using metabolic engineering
Veerle Maervoet
Marjan De Mey
Joeri Beauprez
Sofie De Maeseneire
Wim Soetaert
A1
Journal Article
in
ORGANIC PROCESS RESEARCH & DEVELOPMENT
2011
2009
Exopolysaccharides from yeasts and (yeast-like) fungi
Erick Vandamme
Sofie De Maeseneire
Inge Van Bogaert
C3
Conference
2009
Extracellular polysaccharides produced by yeasts and yeast-like fungi
Inge Van Bogaert
Sofie De Maeseneire
Erick Vandamme
Bookchapter
in
Diversity and potential biotechnological applications of yeasts
2009
2008
Cloning and characterisation of the glyceraldehyde 3-phosphate dehydrogenase gene of Candida bombicola and use of its promoter
Inge Van Bogaert
Sofie De Maeseneire
Dirk Develter
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
JOURNAL OF INDUSTRIAL MICROBIOLOGY AND BIOTECHNOLOGY
2008
Cloning and characterization of the glyceraldehyde-3-phosphate dehydrogenase gene and the use of its promoter for expression in Myrothecium gramineum, a novel expression host
Sofie De Maeseneire
Thierry Dauvrin
Jean-Luc Jonniaux
Inge Van Bogaert
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
FEMS MICROBIOLOGY LETTERS
2008
Development of a transformation and selection system for the glycolipid-producing yeast Candida bombicola
Inge Van Bogaert
Sofie De Maeseneire
Dirk Develter
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
YEAST
2008
2007
Cloning, characterization and functionality of the orotidine-5 '-phosphate decarboxylase gene (URA3) of the glycolipid-producing yeast Candida bombicola
Inge Van Bogaert
Sofie De Maeseneire
Wouter De Schamphelaire
Dirk Develter
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
YEAST
2007
Development of a selection system for the detection of L-ribose isomerase expressing mutants of Escherichia coli
Cassandra De Muynck
Jef Van der Borght
Marjan De Mey
Sofie De Maeseneire
Inge Van Bogaert
Joeri Beauprez
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
2007
Exopolysaccharides from yeasts and (yeast-like) fungi
Erick Vandamme
Sofie De Maeseneire
Inge Van Bogaert
C3
Conference
2007
Minimizing acetate formation in E. coli fermentations
Marjan De Mey
Sofie De Maeseneire
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
2007
Myrothecium gramineum as a novel fungal expression host
Sofie De Maeseneire
E Vandamme
Wim Soetaert
Dissertation
2007
Rapid isolation of fungal genomic DNA suitable for long distance PCR
Sofie De Maeseneire
Inge Van Bogaert
T Dauvrin
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
BIOTECHNOLOGY LETTERS
2007
2006
Cloning, sequence analysis and heterologous expression of the Myrothecium gramineum orotidine-5'-monophosphate decarboxylase gene
Sofie De Maeseneire
Manu De Groeve
Thierry Dauvrin
Marjan De Mey
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
FEMS MICROBIOLOGY LETTERS
2006
Comparison of DNA and RNA quantification methods suitable for parameter estimation in metabolic modeling of microorganisms
Marjan De Mey
Gaspard Lequeux
Jo Maertens
Sofie De Maeseneire
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
ANALYTICAL BIOCHEMISTRY
2006
Metabolic characterisation of E. coli citrate synthase and phosphoenolpyruvate carboxylase mutants in aerobic cultures
Sofie De Maeseneire
Marjan De Mey
Sofie Vandedrinck
Erick Vandamme
A1
Journal Article
in
BIOTECHNOLOGY LETTERS
2006
Transformation of Aspergillus nidulans using the orotidine monophosphate decarboxylase gene of Myrothecium gramineum
Sofie De Maeseneire
Manu De Groeve
T DAUVRIN
Wim Soetaert
Erick Vandamme
C1
Conference
2006
2005
Cloning and Sequence Analysis of the OMP-Decarboxylase Gene of Myrothecium gramineum
Sofie De Maeseneire
Marjan De Mey
Manu De Groeve
T DAUVRIN
Wim Soetaert
Erick Vandamme
C1
Conference
2005
Cloning and characterization of the NADPH-cytochrome P450 reductase gene of Candida bombicola
Inge Van Bogaert
Sofie De Maeseneire
Erick Vandamme
Wim Soetaert
C3
Conference
2005
Cloning and partial sequencing of the NADPH-cytochrome P450 reductase gene of Candida bombicola
Inge Van Bogaert
Sofie De Maeseneire
Erick Vandamme
Wim Soetaert
C3
Conference
2005
Comparison of methods for nucleic acid quantitation
Marjan De Mey
Sofie De Maeseneire
Joeri Beauprez
Katja Van Nieuland
Wim Soetaert
Erick Vandamme
C1
Conference
2005
Comparison of rapid extraction methods for high quality fungal DNA for PCR-applications
Sofie De Maeseneire
Marjan De Mey
Manu De Groeve
T DAUVRIN
Wim Soetaert
Erick Vandamme
C1
Conference
2005
Evaluation of current methods for nucleic acid quantification
Marjan De Mey
Gaspard Lequeux
Katja Van Nieuland
Joeri Beauprez
Sofie De Maeseneire
Jo Maertens
Wim Soetaert
Erick Vandamme
C1
Conference
2005
Evaluation of different methods for nucleic acids quantification
Marjan De Mey
Sofie De Maeseneire
Katja Van Nieuland
Gaspard Lequeux
Wim Soetaert
Erick Vandamme
C1
Conference
2005
Quantification of nucleic acids
Marjan De Mey
Sofie De Maeseneire
Joeri Beauprez
Katja Van Nieuland
Wim Soetaert
Erick Vandamme
C1
Conference
2005
The orotidine monophosphate decarboxylase gene of Myrothecium gramineum: cloning and sequence analysis
Sofie De Maeseneire
Marjan De Mey
Manu De Groeve
T Dauvrin
Wim Soetaert
Erick Vandamme
C1
Conference
2005
2004
Potential of selected lactic acid bacteria to produce food compatible antifungal metabolites
Cassandra De Muynck
AIJ LEROY
Sofie De Maeseneire
F ARNAUT
Wim Soetaert
Erick Vandamme
A1
Journal Article
in
MICROBIOLOGICAL RESEARCH
2004
2002
Construction and enzymatic characterization of E. coli GLTA and PPC mutants.
Sofie Vandedrinck
Sofie De Maeseneire
G DESCHAMPS
E SABLON
Erick Vandamme
A4
Journal Article
in
MEDEDELINGEN VAN DE FACULTEIT LANDBOUWKUNDIGE EN TOEGEPASTE BIOLOGISCHE WETENSCHAPPEN, UNIVERSITEIT GENT
2002
Construction and enzymatic characterization of E. coli glt A and ppc mutants
S VANDEDRINCK
Sofie De Maeseneire
G DE SCHAMPS
E SABLON
Erick Vandamme
C1
Conference
2002