Research Explorer

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Researcher

Shodhan Rao

Awards & Distinctions

42 Results

2023

Model reduction and parameter estimation for kinetic models of biochemical reaction networks

Manvel GasparyanShodhan RaoArnout Van MessemWillem Waegeman

Parameter Estimation for Kinetic Models of Chemical Reaction Networks from Partial Experimental Data of Species’ Concentrations

Manvel GasparyanShodhan Rao

U Journal Article in Bioengineering

Parameter estimation for models of chemical reaction networks from experimental data of reaction rates

Manvel GasparyanArnout Van MessemShodhan Rao

A1 Journal Article in INTERNATIONAL JOURNAL OF CONTROL

2022

Exploring the dynamics of ecological species in intransitive competition networks

Nathan MuyindaShodhan RaoBernard De Baets

The total quasi-steady-state for multiple alternative substrate reactions

Azimberdy BesyaShodhan Rao

A1 Journal Article in JOURNAL OF MATHEMATICAL CHEMISTRY

2021

Conditions for the validity of Michaelis-Menten approximation of some complex enzyme kinetic mechanisms

Shodhan RaoPhilippe Heynderickx

A1 Journal Article in BIOCHEMICAL ENGINEERING JOURNAL

Stability analysis of the coexistence equilibrium of a balanced metapopulation model

Shodhan RaoNathan MuyindaBernard De Baets

A1 Journal Article in SCIENTIFIC REPORTS

2020

An automated model reduction method for biochemical reaction networks

Manvel GasparyanArnout Van MessemShodhan Rao

A1 Journal Article in SYMMETRY-BASEL

Non-king elimination, intransitive triad interactions, and species coexistence in ecological competition networks

Nathan MuyindaBernard De BaetsShodhan Rao

A1 Journal Article in THEORETICAL ECOLOGY

Using intransitive triads to determine final species richness of competition networks

Nathan MuyindaJan BaetensBernard De BaetsShodhan Rao

A1 Journal Article in PHYSICA A - STATISTICAL MECHANICS AND ITS APPLICATIONS

2018

A novel technique for model reduction of biochemical reaction networks

Manvel GasparyanArnout Van MessemShodhan Rao

Lyapunov functions for Michaelis Menten approximation of processive phosphorylation futile cycles

On the linear stability of some finite difference schemes for nonlinear reaction-diffusion models of chemical reaction networks

Nathan MuyindaBernard De BaetsShodhan Rao

A2 Journal Article in COMMUNICATIONS IN APPLIED AND INDUSTRIAL MATHEMATICS

On the stability of finite difference schemes for nonlinear reaction-diffusion systems

Nathan MuyindaBernard De BaetsShodhan Rao

Stability analysis of the Michaelis-Menten approximation of a mixed mechanism of a phosphorylation system

A1 Journal Article in MATHEMATICAL BIOSCIENCES

2017

Global stability of a class of futile cycles

A1 Journal Article in JOURNAL OF MATHEMATICAL BIOLOGY

2016

A network dynamics approach to chemical reaction networks

AJ van der SchaftShodhan RaoB Jayawardhana

A1 Journal Article in INTERNATIONAL JOURNAL OF CONTROL

Model reduction of detailed-balanced reaction networks by clustering linkage classes

Shodhan RaoBayu JayawardhanaArjan van der Schaft

2015

Complex and detailed balancing of chemical reaction networks revisited

Arjan van der SchaftShodhan RaoBayu Jayawardhana

A1 Journal Article in JOURNAL OF MATHEMATICAL CHEMISTRY

Handling biological complexity using Kron reduction

Bayu JayawardhanaShodhan RaoWard SikkemaBarbara M Bakker

Bookchapter in Mathematical control theory I : nonlinear and hybrid control systems

2014

A model reduction method for biochemical reaction networks

Shodhan RaoArjan van der SchaftKaren van EunenBarbara M BakkerBayu Jayawardhana

A1 Journal Article in BMC SYSTEMS BIOLOGY

The short-chain fatty acid uptake fluxes by mice on a guar gum supplemented diet associate with amelioration of major biomarkers of the metabolic syndrome

Gijs den BestenRick HavingaAycha BleekerShodhan RaoAlbert GerdingKaren van EunenAlbert K GroenDirk-Jan ReijngoudBarbara M Bakker

A1 Journal Article in PLOS ONE

2013

A graph-theoretical approach for the analysis and model reduction of complex-balanced chemical reaction networks

Shodhan RaoArjan van der SchaftBayu Jayawardhana

A1 Journal Article in JOURNAL OF MATHEMATICAL CHEMISTRY

Analysis of complex balanced chemical reaction networks with fixed boundary concentrations

Shodhan RaoArjan van der SchaftBayu Jayawardhana

Model-order reduction of biochemical reaction networks

Shodhan RaoArjan van der SchaftKaren van EunenBarbara M BakkerBayu Jayawardhana

On the mathematical structure of balanced chemical reaction networks governed by mass action kinetics

Arjan van der SchaftShodhan RaoBayu Jayawardhana

A1 Journal Article in SIAM JOURNAL ON APPLIED MATHEMATICS

On the network thermodynamics of mass action chemical reaction networks

Arjan van der SchaftShodhan RaoBayu Jayawardhana

Realization of lossless systems via constant matrix factorizations

Paolo RapisardaShodhan Rao

A1 Journal Article in IEEE TRANSACTIONS ON AUTOMATIC CONTROL

2012

A minimal state map for strictly lossless positive real behaviors

A1 Journal Article in IEEE TRANSACTIONS ON AUTOMATIC CONTROL

An algebraic approach to the realization of lossless negative imaginary behaviors

Shodhan RaoPaolo Rapisarda

A1 Journal Article in SIAM JOURNAL ON CONTROL AND OPTIMIZATION

Controllability of conservative behaviours

A1 Journal Article in INTERNATIONAL JOURNAL OF CONTROL

On the graph and systems analysis of reversible chemical reaction networks with mass action kinetics

Shodhan RaoBayu JayawardhanaArjan van der Schaft

2011

A novel energy-efficient rotational variable stiffness actuator

Shodhan RaoRaffaella CarloniStefano Stramigioli

Nevanlinna test of stability

A1 Journal Article in SYSTEMS & CONTROL LETTERS

2010

A polynomial approach to the realization of J-lossless behaviours

Shodhan RaoPaolo RapisardaLewis Moody

Interconnection of J-lossless behaviours

A1 Journal Article in SYSTEMS & CONTROL LETTERS

Stiffness and position control of a prosthetic wrist by means of an EMG interface

Shodhan RaoRaffaella CarloniStefano Stramigioli

2008

Autonomous linear lossless systems

Shodhan RaoPaolo Rapisarda

Higher-order linear lossless systems

Shodhan RaoPaolo Rapisarda

A1 Journal Article in INTERNATIONAL JOURNAL OF CONTROL

Palindromic polynomials, time-reversible systems, and conserved quantities

Ivan MarkovskyShodhan Rao

2006

Bases of conserved and zero-mean quadratic quantities for linear oscillatory systems

Shodhan RaoPaolo Rapisarda

Point-to-point control of a 2R planar horizontal underactuated manipulator

Arun D MahindrakarShodhan RaoRavi N Banavar

A1 Journal Article in MECHANISM AND MACHINE THEORY