Research Explorer

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Researcher

Ruslan Dmitriev

97 Results

2022

Affordable oxygen microscopy-assisted biofabrication of multicellular spheroids

Irina OkkelmanChris VercruysseRuslan Dmitriev

A1 Journal Article in JOVE-JOURNAL OF VISUALIZED EXPERIMENTS

Balance between the cell viability and death in 3D

Angela DebruyneIrina OkkelmanRuslan Dmitriev

A1 Journal Article in SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Electrospinning of poly(decamethylene terephthalate) to support vascular graft applications

Babs Van de VoordeLobke De VosRobin ColenbierJozefien GeltmeyerLaurens ParmentierLenny Van DaeleRuslan DmitrievKaren De ClerckSandra Van Vlierberghe

A1 Journal Article in EUROPEAN POLYMER JOURNAL

2021

Intracellular label-free detection of mesenchymal stem cell metabolism within a perivascular niche-on-a-chip

Ruslan Dmitriev

A1 Journal Article in LAB ON A CHIP

Luminescence lifetime imaging of three-dimensional biological objects

Ruslan Dmitriev

A1 Journal Article in JOURNAL OF CELL SCIENCE

MISpheroID : a knowledgebase and transparency tool for minimum information in spheroid identity

Arne PeirsmanEva BlondeelJasper AnckaertDominique AudenaertTom BoterbergElly De VlieghereSandor DedeyneHerman DepypereRuslan DmitrievSuzanne FischerVera GoossensAn HendrixSebastiaan MaesChristophe MangodtPieter MestdaghCláudio PinheiroGwen SysJoeri TulkensJo VandesompeleGlenn WagemansNurten YigitPhillip BlondeelOlivier De Wever

A1 Journal Article in NATURE METHODS

2020

A deeper understanding of intestinal organoid metabolism revealed by combining fluorescence lifetime imaging microscopy (FLIM) and extracellular flux analyses

Ruslan Dmitriev

A1 Journal Article in REDOX BIOLOGY

Disruption of hypoxia-inducible fatty acid binding protein 7 induces beige fat-like differentiation and thermogenesis in breast cancer cells

Ruslan Dmitriev

A1 Journal Article in CANCER & METABOLISM

Disruption of hypoxia-inducible fatty acid binding protein 7 induces beige fat-like differentiation and thermogenesis in breast cancer cells (vol 8, 13, 2020)

Ruslan Dmitriev

Estimation of the mitochondrial membrane potential using fluorescence lifetime imaging microscopy

Ruslan Dmitriev

A1 Journal Article in CYTOMETRY PART A

Evaluation of Ebselen-azadioxatriangulenium as redox-sensitive fluorescent intracellular probe and as indicator within a planar redox optode

Ruslan Dmitriev

A1 Journal Article in DYES AND PIGMENTS

Extracellular Ca2+-sensing fluorescent protein biosensor based on a collagen-binding domain

Ruslan Dmitriev

A2 Journal Article in ACS APPLIED BIO MATERIALS

Fatty acid binding protein 7 regulates beige fat-like differentiation of breast cancer cells and thermogenesis

Ruslan Dmitriev

Investigating the role of SCO2 in the metabolic adaptation of cancer cells

Ruslan Dmitriev

Multi-parameter fluorescence lifetime imaging microscopy (FLIM) for imaging metabolism in the intestinal organoids model

Ruslan Dmitriev

Multiparametric optical bioimaging reveals the fate of epoxy crosslinked biomeshes in the mouse subcutaneous implantation model

Ruslan Dmitriev

A1 Journal Article in FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY

2019

Background-free fluorescence-decay-time sensing and imaging of PH with highly photostable diazaoxotriangulenium dyes

Ruslan Dmitriev

A1 Journal Article in ANALYTICAL CHEMISTRY

Chemical cross-linking of xenopericardial biomeshes : a bottom-up study of structural and functional correlations

Ruslan Dmitriev

A1 Journal Article in XENOTRANSPLANTATION

2018

Cellulose-based scaffolds for fluorescence lifetime imaging-assisted tissue engineering

Ruslan Dmitriev

A1 Journal Article in ACTA BIOMATERIALIA

Hybrid biosensing cellulose-based scaffolds for imaging-assisted tissue engineering

Ruslan Dmitriev

Hydrogel-assisted neuroregeneration approaches towards brain injury therapy : a state-of-the-art review

Ruslan Dmitriev

A1 Journal Article in COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL

Imaging of oxygen and hypoxia in cell and tissue samples

Ruslan Dmitriev

A1 Journal Article in CELLULAR AND MOLECULAR LIFE SCIENCES

Nanoparticle-based fluoroionophore for analysis of Potassium Ion dynamics in 3D tissue models and in vivo

Ruslan Dmitriev

A1 Journal Article in ADVANCED FUNCTIONAL MATERIALS

New biosensors for metabolic imaging

Ruslan Dmitriev

Potassium-sensitive nanoparticles for imaging neural tissues in vitro and in vivo

Ruslan Dmitriev

Stop codon readthrough generates a C-terminally extended variant of the human vitamin D receptor with reduced calcitriol response

Ruslan Dmitriev

A1 Journal Article in JOURNAL OF BIOLOGICAL CHEMISTRY

Versatile biosensing scaffold platform based on fluorescent proteins and cellulose

Ruslan Dmitriev

2017

Fabrication and handling of 3D scaffolds based on polymers and decellularized tissues

Ruslan Dmitriev

A1 Journal Article in Advances in Experimental Medicine and Biology

In-vitro estimation of O-2 concentrations during corneal cross-linking (CXL) for porcine corneas and collagen type-I gels

Ruslan Dmitriev

Live cell FLIM-PLIM microscopy reveals proliferative and metabolic heterogeneity of intestinal organoids

Ruslan Dmitriev

Live cell imaging of mouse intestinal organoids reveals heterogeneity in their oxygenation

Ruslan Dmitriev

A1 Journal Article in BIOMATERIALS

Live cell microscopy of intestinal organoid oxygenation

Ruslan Dmitriev

Multi-parametric imaging of hypoxia and cell cycle in intestinal organoid culture

Ruslan Dmitriev

A1 Journal Article in Advances in Experimental Medicine and Biology

Multi-parametric live cell microscopy of 3D tissue models preface

Ruslan Dmitriev

Editorial material

Quantitative multi-parametric microscopy analysis of live 3D cell models

Ruslan Dmitriev

Steering surface topographies of electrospun fibers : understanding the mechanisms

Ruslan Dmitriev

A1 Journal Article in SCIENTIFIC REPORTS

Three-dimensional tissue models and available probes for multi-parametric live cell microscopy : a brief overview

Ruslan Dmitriev

A1 Journal Article in Advances in Experimental Medicine and Biology

2016

Development of advanced 3D tissue models and O2 imaging methodologies

Ruslan Dmitriev

Evolutionary diversification of the BetaM interactome acquired through co-option of the ATP1B4 gene in placental mammals

Ruslan Dmitriev

A1 Journal Article in SCIENTIFIC REPORTS

High-resolution analysis of molecular oxygen in mammalian cell models by phosphorescence lifetime imaging microscopy

Ruslan Dmitriev

Metallochelate coupling of phosphorescent Pt-porphyrins to peptides, proteins, and self-assembling protein nanoparticles

Ruslan Dmitriev

A1 Journal Article in BIOCONJUGATE CHEMISTRY

Monitoring of O-2 concentrations during Corneal cross-Linking (CXL) by phosphorescence lifetime imaging microscopy (PLIM)

Ruslan Dmitriev

Sulforhodamine nanothermometer for multiparametric fluorescence lifetime imaging microscopy

Ruslan Dmitriev

A1 Journal Article in ANALYTICAL CHEMISTRY

Systematic analysis of the PTEN 5 ' leader identifies a major AUU initiated proteoform

Ruslan Dmitriev

A1 Journal Article in OPEN BIOLOGY

The Ca2+/Mn2+-transporting SPCA2 pump is regulated by oxygen and cell density in colon cancer cells

Ruslan Dmitriev

A1 Journal Article in BIOCHEMICAL JOURNAL

The secretory pathway Ca2+/Mn2+-Atpase SPCA2 regulates Mn2+-dependent cell cycle progression in 3D culture of colon cancer cells

Ruslan Dmitriev

Two-acceptor cyanine-based fluorescent indicator for NAD(P)H in tumor cell models

Ruslan Dmitriev

A1 Journal Article in ACS SENSORS

Use of fluorescence lifetime imaging microscopy (FLIM) as a timer of cell cycle S phase

Ruslan Dmitriev

A1 Journal Article in PLOS ONE

2015

Imaging of oxygenation in 3D tissue models with multi-modal phosphorescent probes

Ruslan Dmitriev

Imaging oxygen in neural cell and tissue models by means of anionic cell-permeable phosphorescent nanoparticles

Ruslan Dmitriev

A1 Journal Article in CELLULAR AND MOLECULAR LIFE SCIENCES

In vitro ischemia decreases histone H4K16 acetylation in neural cells

Ruslan Dmitriev

A1 Journal Article in FEBS LETTERS

Intracellular probes for imaging oxygen concentration : how good are they?

Ruslan Dmitriev

A1 Journal Article in METHODS AND APPLICATIONS IN FLUORESCENCE

LOXL2 expression in HCT116 cells under normoxia is regulated by ROS and HIF signaling

Ruslan Dmitriev

Luminescence lifetime imaging microscopy for analysis of oxygen in the cancer cell

Ruslan Dmitriev

Multi-parametric imaging of tumor spheroids with ultra-bright and tunable nanoparticle O-2 probes

Ruslan Dmitriev

Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutes

Ruslan Dmitriev

A1 Journal Article in GENOME BIOLOGY

Oxygen-sensing scaffolds for 3-dimensional cell and tissue culture

Ruslan Dmitriev

A1 Journal Article in ACTA BIOMATERIALIA

Versatile conjugated polymer nanoparticles for high-resolution O-2 imaging in cells and 3D tissue models

Ruslan Dmitriev

A1 Journal Article in ACS NANO

2014

Availability of the key metabolic substrates dictates the respiratory response of cancer cells to the mitochondrial uncoupling

Ruslan Dmitriev

A1 Journal Article in BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Comparison of different techniques for monitoring of mammalian cell respiration

Ruslan Dmitriev

Imaging of molecular oxygen at subcellular resolution in mammalian cell culture : from 2D to 3D models

Ruslan Dmitriev

Real-time monitoring of oxygenation in cultured organotypic brain slices

Ruslan Dmitriev

Small molecule phosphorescent probes for O-2 imaging in 3D tissue models

Ruslan Dmitriev

A1 Journal Article in BIOMATERIALS SCIENCE

Two distinct nuclear localization signals in mammalian MSL1 regulate its function

Ruslan Dmitriev

A1 Journal Article in JOURNAL OF CELLULAR BIOCHEMISTRY

pH-sensitive perylene bisimide probes for live cell fluorescence lifetime imaging

Ruslan Dmitriev

A1 Journal Article in JOURNAL OF MATERIALS CHEMISTRY B

2013

3D O-2 imaging in the neuronal spheroids

Ruslan Dmitriev

Biological detection by optical oxygen sensing

Ruslan Dmitriev

A1 Journal Article in CHEMICAL SOCIETY REVIEWS

Chronic hypoxia leads to a glycolytic phenotype and suppressed HIF-2 signaling in PC12 cells

Ruslan Dmitriev

A1 Journal Article in BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Genome-wide investigation of cellular targets and mode of action of the antifungal bacterial metabolite 2,4-diacetylphloroglucinol in Saccharomyces cerevisiae

Ruslan Dmitriev

A1 Journal Article in FEMS YEAST RESEARCH

Imaging of neurosphere oxygenation with phosphorescent probes

Ruslan Dmitriev

A1 Journal Article in BIOMATERIALS

Insight into oxygenation levels within 3D cell models and its impact on cell metabolism

Ruslan Dmitriev

Measurement of cell respiration and oxygenation in standard multichannel biochips using phosphorescent O-2-sensitive probes

Ruslan Dmitriev

A1 Journal Article in ANALYST

Phosphorescent O-2 imaging probes for use in 3D tissue models

Ruslan Dmitriev

Phosphorescent nanoparticle based probes for imaging and measurement of cellular oxygen

Ruslan Dmitriev

2012

A phosphorescent nanoparticle-based probe for sensing and imaging of (intra)cellular oxygen in multiple detection modalities

Ruslan Dmitriev

A1 Journal Article in ADVANCED FUNCTIONAL MATERIALS

Assessment of cellular oxygen gradients with a panel of phosphorescent oxygen-sensitive probes

Ruslan Dmitriev

A1 Journal Article in ANALYTICAL CHEMISTRY

Assessment of intracellular O-2 gradient on a microplate reader

Ruslan Dmitriev

Availability of key metabolic substrates determines metabolic responses, local oxygenation and HIF-2a stabilization in pheochromocytoma PC12 cells

Ruslan Dmitriev

Bafilomycin A1 activates HIF-dependent signalling in human colon cancer cells via mitochondrial uncoupling

Ruslan Dmitriev

A1 Journal Article in BIOSCIENCE REPORTS

Complexes of irIII-octaethylporphyrin with peptides as probes for sensing cellular O2

Ruslan Dmitriev

A1 Journal Article in CHEMBIOCHEM

Histone H4 acetylation at K16 residue and mitochondrial activity in neuronal cells

Ruslan Dmitriev

Optical probes and techniques for O-2 measurement in live cells and tissue

Ruslan Dmitriev

A1 Journal Article in CELLULAR AND MOLECULAR LIFE SCIENCES

Structural evolution and tissue-specific expression of tetrapod-specific second isoform of secretory pathway Ca2+-ATPase

Ruslan Dmitriev

A1 Journal Article in BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

2011

Bafilomycin A1 activates respiration of neuronal cells via uncoupling associated with flickering depolarization of mitochondria

Ruslan Dmitriev

A1 Journal Article in CELLULAR AND MOLECULAR LIFE SCIENCES

Cell-penetrating conjugates of coproporphyrins with oligoarginine peptides : rational design and application for sensing intracellular O-2

Ruslan Dmitriev

A1 Journal Article in BIOCONJUGATE CHEMISTRY

Oxygen microscopy and high-throughput analysis of icO(2) by means of cell-penetrating phosphorescent dyes

Ruslan Dmitriev

Rational design and experimental assessment of the new family of intracellular O-2-sensitive probes

Ruslan Dmitriev

Uncoupling effect of bafilomycin A1 on HIF and cell bioenergetics

Ruslan Dmitriev

2010

Analysis of cellular function by use of cell-penetrating oxygen sensing probes

Ruslan Dmitriev

Bactenecin 7 peptide fragment as a tool for intracellular delivery of a phosphorescent oxygen sensor

Ruslan Dmitriev

A1 Journal Article in FEBS JOURNAL

Intracellular oxygen-sensitive phosphorescent probes based on cell-penetrating peptides

Ruslan Dmitriev

A1 Journal Article in ANALYTICAL BIOCHEMISTRY

2009

Nuclear transport of protein TTC4 depends on the cell cycle

Ruslan Dmitriev

A1 Journal Article in CELL AND TISSUE RESEARCH

2008

Structure and function of MYST1 histone acetyltransferase in the interactome of animal cells

Ruslan Dmitriev

A1 Journal Article in BIOCHEMISTRY-MOSCOW

TTC4 provides a functional link between RASSF1C and DNA primase

Ruslan Dmitriev

2007

Characterization of hampin/MSL1 as a node in the nuclear interactome

Ruslan Dmitriev

A1 Journal Article in BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Identification of novel protein-protein interactions pertinent to regulation of mammalian hampin/MSL1 and histone acetylase MYST1/MOF

Ruslan Dmitriev

2005

A Caenorhabditis elegans mutant lacking functional nicotinamide nucleotide transhydrogenase displays increased sensitivity to oxidative stress

Ruslan Dmitriev

A1 Journal Article in FREE RADICAL BIOLOGY AND MEDICINE