Research Explorer

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Researcher

Polina Novikova

Awards & Distinctions

32 Results

2025

Autopolyploidy exacerbates dominance masking under negative frequency-dependent selection : evidence from sporophytic self-incompatibility in<i>Arabidopsis arenosa</i>and<i>A. lyrata</i>

Xavier VekemansUliana KolesnikovaJakub VlcekMathieu GeneteAdrien DufourRowan WeltiCéline PouxVincent CastricFilip KolarPolina Novikova

Copy Number Variation: A Substrate for Plant Adaptation and Stress Response in Arabidopsis

Piyal KarunarathneYannick SchäferAnna GlushkevichAlison D. ScottLeen AbrahamJuliette de MeauxPolina NovikovaThomas WieheLaura E. Rose

Diploid origins and early genome stabilization in the allotetraploid <i>Arabidopsis suecica</i>

Robin BurnsAnna GlushkevichAboli KulkarniUliana K. KolesnikovaFilip KolářAlison Dawn ScottPolina Novikova

U Journal Article in New Phytologist

Identification of a gene conferring broad-spectrum orthotospovirus resistance in Solanaceae

Yong LiuJie WangChongkun ZuoWeishu FanCheng YuanJianmin ZengHaiqin YuZhijun TongXueyi SuiYi Xu et al.

A1 Journal Article in SCIENCE ADVANCES

Life-history trade-offs explain local adaptation in Arabidopsis thaliana

Benjamin BrachiDanièle L. FiliaultRahul PisupatiTal Dahan-MeirAnna IgolkinaAlison AnastasioMathew S. BoxSusan DuncanTalia L. KarasovEnvel Kerdaffrec et al.

Life-history trade-offs explain local adaptation in Arabidopsis thaliana

Benjamin BrachiDanièle L FiliaultRahul PisupatiTal Dahan-MeirAnna IgolkinaAlison AnastasioMathew S BoxSusan DuncanTalia L KarasovEnvel Kerdaffrec et al.

Multiple autopolyploid Arabidopsis lyrata populations stabilized by long-range adaptive introgression across Eurasia

Alison D. ScottUliana K. KolesnikovaAnna GlushkevichLaura SteinmannNikita P. TikhomirovUrsula PfordtMagdalena BohutínskáRobin BurnsAlexey P. SereginFilip Kolar et al.

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

2024

Diploid origins and early genome stabilization in the allotetraploid <i>Arabidopsis suecica</i>

Robin BurnsAnna GlushkevichAboli KulkarniUliana K KolesnikovaFilip KolářAlison Dawn ScottPolina Novikova

Polyploid genome assembly of Cardamine chenopodiifolia

Aurélia EmonetMohamed AwadNikita TikhomirovMaria VasilarouMiguel Pérez-AntónXiangchao GanPolina NovikovaAngela Hay

A2 Journal Article in GIGABYTE

Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment

Xiao MaSteffen VannesteJiyang ChangLuca AmbrosinoKerrie BarryTill BayerAlexander A. BobrovLoriBeth BostonJustin E. CampbellHengchi Chen et al.

A1 Journal Article in NATURE PLANTS

2023

Ancestral self-compatibility facilitates the establishment of allopolyploids in Brassicaceae

Polina NovikovaUliana K. KolesnikovaAlison Dawn Scott

A1 Journal Article in PLANT REPRODUCTION

Cycles of satellite and transposon evolution in Arabidopsis centromeres

Piotr WlodzimierzFernando A. RabanalRobin BurnsMatthew NaishElias PrimetisAlison ScottTerezie MandákovaNicola GorringeAndrew J. TockDaniel Holland et al.

A1 Journal Article in NATURE

Inference of polyploid origin and inheritance mode from population genomic data

Alison Dawn ScottJozefien D. Van de VeldePolina Novikova

Bookchapter in Polyploidy : methods and protocols

Long-read sequencing in ecology and evolution : understanding how complex genetic and epigenetic variants shape biodiversity

Dan G. BockJianquan LiuPolina NovikovaLoren H. Rieseberg

Editorial material

Transition to self-compatibility associated with dominant S-allele in a diploid Siberian progenitor of allotetraploid Arabidopsis kamchatica revealed by Arabidopsis lyrata genomes

Uliana K. KolesnikovaAlison Dawn ScottJozefien D. Van de VeldeRobin BurnsNikita P. TikhomirovUrsula PfordtAndrew C. ClarkeLevi YantAlexey P. SereginXavier Vekemans et al.

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

2022

Plant genetic effects on microbial hubs impact host fitness in repeated field trials

Benjamin BrachiDaniele FiliaultHannah WhitehurstPaul DarmePierre Le GarsMarine Le MentecTimothy C. MortonEnvel KerdaffrecFernando RabanalAlison Anastasio et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SNP detection in Pinus pinaster transcriptome and association with resistance to pinewood nematode

Inês Sofia Barrios ModestoVera InácioPolina NovikovaIsabel CarrasquinhoYves Van de PeerCélia M. Miguel

A1 Journal Article in FORESTS

2021

Gradual evolution of allopolyploidy in Arabidopsis suecica

Robin BurnsTerezie MandákováJoanna GunisLuz Mayela Soto-JiménezChang LiuMartin A. LysakPolina NovikovaMagnus Nordborg

A1 Journal Article in NATURE ECOLOGY & EVOLUTION

2020

Parallel adaptation to climate above the 35th parallel

Robin BurnsPolina Novikova

Editorial material

Polyploidy breaks speciation barriers in Australian burrowing frogs Neobatrachus

Polina NovikovaIan G. BrennanWilliam BookerMichael MahonyPaul DoughtyAlan R. LemmonEmily Moriarty LemmonJ. Dale RobertsLevi YantYves Van de Peer et al.

A1 Journal Article in PLOS GENETICS

2019

Genome of Crucihimalaya himalaica, a close relative of Arabidopsis, shows ecological adaptation to high altitude

Ticao ZhangQin QiaoPolina NovikovaQia WangJipei YueYanlong GuanShengping MingTianmeng LiuJi DeYixuan Liu et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple independent recruitment of sodefrin precursor-like factors in anuran sexually dimorphic glands

Franky BossuytLisa M SchulteMargo MaexSunita JanssenswillenPolina NovikovaSD BijuYves Van de PeerSeverine MatthijsKim RoelantsAn Martel et al.

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

2018

Polyploid Arabidopsis species originated around recent glaciation maxima

Polina NovikovaNora HohmannYves Van de Peer

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

2017

Genome sequencing reveals the origin of the allotetraploid Arabidopsis suecica

Polina NovikovaTakashi TsuchimatsuSamson SimonViktoria NizhynskaViktor VoroninRobin BurnsOlga M. FedorenkoSvante HolmTorbjörn SällElisa Prat et al.

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

On the post-glacial spread of human commensal Arabidopsis thaliana

Cheng-Ruei LeeHannes SvardalAshley FarlowMoises Exposito-AlonsoWei DingPolina NovikovaCarlos Alonso-BlancoDetlef WeigelMagnus Nordborg

A1 Journal Article in NATURE COMMUNICATIONS

Unstable inheritance of 45S rRNA genes in Arabidopsis thaliana

Fernando A. RabanalViktoria NizhynskaTerezie MandákovaPolina NovikovaMartin A. LysakRichard MottMagnus Nordborg

A1 Journal Article in G3-GENES GENOMES GENETICS

2016

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

Carlos Alonso-BlancoJorge AndradeClaude BeckerFelix BemmJoy BergelsonKarsten M. BorgwardtJun CaoEunyoung ChaeTodd M. DezwaanWei Ding et al.

U Journal Article in CELL

Epigenomic diversity in a global collection of Arabidopsis thaliana accessions

Taiji KawakatsuShao-shan Carol HuangFlorian JupeEriko SasakiRobert J. SchmitzMark A. UrichRosa CastanonJoseph R. NeryCesar BarraganYupeng He et al.

A1 Journal Article in CELL

Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism

Polina NovikovaNora HohmannViktoria NizhynskaTakashi TsuchimatsuJamshaid AliGraham MuirAlessia GuggisbergTim PaapeKarl SchmidOlga M. Fedorenko et al.

A1 Journal Article in NATURE GENETICS

The footprint of polygenic adaptation on stress-responsive cis-regulatory divergence in the Arabidopsis genus

Fei HeAgustin L. ArceGregor SchmitzMaarten KoornneefPolina NovikovaAndreas BeyerJuliette de Meaux

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

2015

Exogenous selection rather than cytonuclear incompatibilities shapes asymmetrical fitness of reciprocal Arabidopsis hybrids

Graham MuirPaola Ruiz-DuarteNora HohmannBarbara K. MablePolina NovikovaRoswitha SchmicklAlessia GuggisbergMarcus A. Koch

A1 Journal Article in ECOLOGY AND EVOLUTION

2009

Molecular modeling of the reactive configuration of peroxidized lipid and alpha-tocopherol in the membrane

Polina NovikovaP. M. Krasilnikov

A2 Journal Article in BIOPHYSICS