Research Explorer

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Researcher

Pierre Rouzé

Awards & Distinctions

104 Results

2021

Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp

Sarah FarhatPhuong LEEhsan KayalBenjamin NoelEstelle BigeardErwan CorreFlorian MaumusIsabelle FlorentAdriana AlbertiJean-Marc Aury et al.

A1 Journal Article in BMC BIOLOGY

2016

Complex evolutionary dynamics of massively expanded chemosensory receptor families in an extreme generalist chelicerate herbivore

Thi Ngoc Phuong CaoRobert GreenhalghWannes DermauwStephane RombautsSabina Bajda-WybouwVladimir ZhurovMiodrag GrbićYves Van de PeerThomas Van LeeuwenPierre Rouzé et al.

A1 Journal Article in GENOME BIOLOGY AND EVOLUTION

The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

Jeanine L OlsenPierre RouzéBram VerhelstYao-Cheng LinTill BayerJonas CollenEmanuela DattoloEmanuele De PaoliSimon DittamiFlorian Maumus et al.

A1 Journal Article in NATURE

2013

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne

Tom RuttinkLieven SterckAntje RohdeChristian BendixenPierre RouzéTorben AspYves Van de PeerIsabel Roldán-Ruiz

A1 Journal Article in PLANT BIOTECHNOLOGY JOURNAL

The complex intron landscape and massive intron invasion in a picoeukaryote provides insights into intron evolution

Bram VerhelstYves Van de PeerPierre Rouzé

A1 Journal Article in GENOME BIOLOGY AND EVOLUTION

2012

A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust)

Stéphane HacquardDavid L JolyYao-Cheng LinEmilie TisserantNicolas FeauChristine DelaruelleValérie LeguéAnnegret KohlerPhilippe TanguayBenjamin Petre et al.

A1 Journal Article in MOLECULAR PLANT-MICROBE INTERACTIONS

Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage

Hervé MoreauBram VerhelstArnaud CoulouxEvelyne DerelleStephane RombautsNigel GrimsleyMichiel Van BelJulie PoulainMichaël KatinkaMartin F Hohmann-Marriott et al.

A1 Journal Article in GENOME BIOLOGY

Higher intron loss rate in Arabidopsis thaliana than A. lyrata is consistent with stronger selection for a smaller genome

Jeffrey FawcettPierre RouzéYves Van de Peer

A1 Journal Article in MOLECULAR BIOLOGY AND EVOLUTION

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

Åke OlsonAndrea AertsFred AsiegbuLassaad BelbahriOurdia BouzidAnders BrobergBjörn CanbäckPedro M CoutinhoDan CullenKerstin Dalman et al.

A1 Journal Article in NEW PHYTOLOGIST

ORCAE: online resource for community annotation of eukaryotes

Lieven SterckKenny BilliauThomas AbeelPierre RouzéYves Van de Peer

A1 Journal Article in NATURE METHODS

The Ectocarpus genome and brown algal genomics : the Ectocarpus Genome Consortium

J Mark CockLieven SterckSophia AhmedAndrew E AllenGrigoris AmoutziasVeronique AnthouardFrançois ArtiguenaveAlok ArunJean-Marc AuryJonathan H Badger et al.

A1 Journal Article in Advances in Botanical Research

2011

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie ChancerelCamille LepoittevinGregoire Le ProvostYao-Cheng LinJuan Pablo Jaramillo-CorreaAndrew J EckertJill L WegrzynDiana ZelenikaAnne BolandJean-Marc Frigerio et al.

A1 Journal Article in BMC GENOMICS

Nature, nurture and the structure of macroalgal genomes

J Mark CockJonas CollénLieven SterckPierre RouzéDelphine ScornetVeronique AnthouardFrançois ArtiguenaveJean-Marie AuryKenny BilliauEric Bonnet et al.

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Sébastien DuplessisChristina A CuomoYao-Cheng LinAndrea AertsEmilie TisserantClaire Veneault-FourreyDavid L JolyStéphane HacquardJoëlle AmselemBrandi L Cantarel et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genome of Tetranychus urticae reveals herbivorous pest adaptations

Miodrag GrbićThomas Van LeeuwenRichard M ClarkStephane RombautsPierre RouzéVojislava GrbićEdward J OsborneWannes DermauwThi Ngoc Phuong CaoFélix Ortego et al.

A1 Journal Article in NATURE

2010

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

J Mark CockLieven SterckPierre RouzéDelphine ScornetAndrew E AllenGrigoris AmoutziasVéronique AnthouardFrançois ArtiguenaveJean-Marc AuryJonathan H Badger et al.

A1 Journal Article in NATURE

The genome of the domesticated apple (Malus x domestica Borkh.)

Riccardo VelascoAndrey ZharkikhJason AffourtitAmit DhingraAlessandro CestaroAnanth KalyanaramanPaolo FontanaSatish K BhatnagarMichela TroggioDmitry Pruss et al.

A1 Journal Article in NATURE GENETICS

2009

Evolution of multicellularity in the heterokont lineage : analysis of the Ectocarpus siliculosus genome sequence

J Mark CockDelphine ScornetAkira F PetersLieven SterckPierre RouzéYves Van de PeerJean WeissenbachPatrick Wincker

Genome sequence of the recombinant protein production host Pichia pastoris

Kristof De SchutterYao-Cheng LinPetra TielsAnnelies Van HeckeS GlinkaJ Weber-LehmannPierre RouzéYves Van de PeerNico Callewaert

A1 Journal Article in NATURE BIOTECHNOLOGY

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

Simon DittamiDelphine ScornetJean-Louis PetitBéatrice SégurensCorinne Da SilvaErwan CorreMichael DondrupKarl-Heinz GlattingRainer KönigLieven Sterck et al.

A1 Journal Article in Genome Biology

Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas

Alexandra Z WordenJea-Hyeok LeeThomas MockPierre RouzéMelinda P SimmonsAndrea L AertsAndrew E AllenMarie L CuvelierEvelyne DerelleMeredith V Everett et al.

A1 Journal Article in SCIENCE

Open access to sequence: Browsing the Pichia pastoris genome

D MattanovichNico CallewaertPierre RouzéYC LinA GrafA RedlPetra TielsB GasserKristof De Schutter

A1 Journal Article in MICROBIAL CELL FACTORIES

Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression

Stefanie De BodtSebastian ProostKlaas VandepoelePierre RouzéYves Van de Peer

A1 Journal Article in BMC Genomics

2008

Generic eukaryotic core promoter prediction using structural features of DNA

Thomas AbeelYvan SaeysEric BonnetPierre RouzéYves Van de Peer

A1 Journal Article in GENOME RESEARCH

Genome annotation in plants and fungi: EuGène as a model platform

Sylvain FoissacJérôme GouzyStephane RombautsCatherine MatheJoëlle AmselemLieven SterckYves Van de PeerPierre RouzéThomas Schiex

A1 Journal Article in CURRENT BIOINFORMATICS

ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles

Thomas AbeelYvan SaeysPierre RouzéYves Van de Peer

A1 Journal Article in BIOINFORMATICS

The FTO gene, implicated in human obesity, is found only in vertebrates and marine algae

Steven RobbensPierre RouzéJ Mark CockJürg SpringAlexandra Z WordenYves Van de Peer

A1 Journal Article in JOURNAL OF MOLECULAR EVOLUTION

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

F MartinA AertsD AhrénA BrunEGJ DanchinF DuchaussoyJ GibonA KohlerE LindquistV Pereda et al.

A1 Journal Article in NATURE

2007

How many genes are there in plants (... and why are they there)?

Lieven SterckStephane RombautsKlaas VandepoelePierre RouzéYves Van de Peer

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists

Yvan SaeysPierre RouzéYves Van de Peer

A1 Journal Article in BIOINFORMATICS

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

Brian PalenikJane GrimwoodAndrea AertsPierre RouzéAsaf SalamovNicholas PutnamChris DupontRichard JorgensenEvelyne DerelleStephane Rombauts et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unique regulation of the Calvin cycle in the ultrasmall green alga Ostreococcus

Steven RobbensJörn PetersenHenner BrinkmannPierre RouzéYves Van de Peer

A1 Journal Article in JOURNAL OF MOLECULAR EVOLUTION

2006

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

Evelyne DerelleConchita FerrazStephane RombautsPierre RouzéAlexandra Z WordenSteven RobbensFrédéric PartenskySven DegroeveSophie EcheyniéRichard Cooke et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)

GA TuskanS DiFazioS JanssonJ BohlmannI GrigorievU HellstenN PutnamS RalphStephane RombautsA Salamov et al.

A1 Journal Article in SCIENCE

The small RNA world of plants

Eric BonnetYves Van de PeerPierre Rouzé

A1 Journal Article in NEW PHYTOLOGIST

2005

EST data suggest that poplar is an ancient polyploid

Lieven SterckStephane RombautsStefan JanssonFredrik SterkyPierre RouzéYves Van de Peer

A1 Journal Article in NEW PHYTOLOGIST

GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts

Sebastien AubourgVéronique BrunaudClémence BruyèreMark CockRichard CookeAnnick CottetArnaud CoulouxPatrice DehaisGilbert DeléageAymeric Duclert et al.

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Genome analysis of the world's smallest free-living eukaryote Ostreococcus tauri unveils unique genome heterogeneity

Steven RobbensStephane RombautsPierre RouzéJan WuytsYvan SaeysHervé MoreauYves Van de Peer

Large-scale structural analysis of the core promoter in mammalian and plant genomes

Kobe FlorquinYvan SaeysSven DegroevePierre RouzéYves Van de Peer

A1 Journal Article in NUCLEIC ACIDS RESEARCH

SpliceMachine: predicting splice sites from high-dimensional local context representations

Sven DegroeveYvan SaeysBernard De BaetsPierre RouzéYves Van de Peer

A1 Journal Article in BIOINFORMATICS

2004

Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements

Magali LescotStephane RombautsJiong ZhangSebastien AubourgCatherine MatheS JanssonPierre RouzéWout Boerjan

A1 Journal Article in THEORETICAL AND APPLIED GENETICS

Detection of 91 potential in plant conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes

Eric BonnetJan WuytsPierre RouzéYves Van de Peer

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences

Eric BonnetJan WuytsPierre RouzéYves Van de Peer

A1 Journal Article in BIOINFORMATICS

Feature selection for splice site prediction: A new method using EDA-based feature ranking

Yvan SaeysSven DegroeveDirk AeyelsPierre RouzéYves Van de Peer

A1 Journal Article in BMC BIOINFORMATICS

Selecting relevant features for gene structure prediction

Yvan SaeysSven DegroeveDirk AeyelsPierre RouzéYves Van de Peer

Splice site prediction in eukaryote genome sequences : the algorithmic issues

Sven DegroeveYvan SaeysBernard De BaetsYves Van de PeerPierre Rouzé

Bookchapter in The new avenues in bioinformatics

Versatile gene-specific sequence tags for Arabidopsis functional genomics : trancript profiling and reverse genetics applications

Pierre HilsonJoke AllemeerschThomas AltmannSebastien AubourgAlexandra AvonJim BeynonRishikesh P BhaleraoFrédérique BittonMichel CabocheBernard Cannoot et al.

A1 Journal Article in GENOME RESEARCH

2003

AFLPinSilico, simulating AFLP fingerprints

Stephane RombautsYves Van de PeerPierre Rouzé

A1 Journal Article in BIOINFORMATICS

Automatic design of gene-specific sequence tags for genome-wide functional studies

Vincent ThareauPatrice DehaisCarine SerizetPierre HilsonPierre RouzéSebastien Aubourg

A1 Journal Article in BIOINFORMATICS

CATMA : a complete Arabidopsis GST database

Mark L CroweCarine SerizetVincent ThareauSebastien AubourgPierre RouzéPierre HilsonJim BeynonPeter WeisbeekPaul Van HummelenPhilippe Reymond et al.

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Computational approaches to identify promoters and cis-regulatory elements in plant genomes

Stephane RombautsKobe FlorquinMagali LescotKathleen MarchalPierre RouzéYves Van de Peer

A1 Journal Article in PLANT PHYSIOLOGY

Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction

Yvan SaeysSven DegroeveDirk AeyelsYves Van de PeerPierre Rouzé

A1 Journal Article in BIOINFORMATICS

Feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction

Yvan SaeysSven DegroeveDirk AeyelsYves Van de PeerPierre Rouzé

Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants

Stefanie De BodtJeroen RaesKobe FlorquinStephane RombautsPierre RouzéGünter TheißenYves Van de Peer

A1 Journal Article in JOURNAL OF MOLECULAR EVOLUTION

Orphan gene finding: an exon assembly approach

Philippe BlayoPierre RouzéMarie-France Sagot

A1 Journal Article in THEORETICAL COMPUTER SCIENCE

2002

A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes

Gert ThijsKathleen MarchalMagali LescotStephane RombautsBart De MoorPierre RouzéYves Moreau

A1 Journal Article in JOURNAL OF COMPUTATIONAL BIOLOGY

Current methods of gene prediction, their strengths and weaknesses

Catherine MatheMarie-France SagotThomas SchiexPierre Rouzé

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Deciphering cis-acting regulatory elements in plant and drosophila promoter sequences

Magali LescotGert ThijsStephane RombautsPatrice DehaisDavid MartinDenis ThieffryBernard JacqYves MoreauPierre RouzéJacques van Helden

Design and databasing for the Complete Arabidopsis Transcriptome MicroArray (CATMA) project

Carine SerizetVincent ThareauSebastien AubourgMark CrowePierre HilsonPierre Rouzé

Feature subset selection for splice site prediction

Sven DegroeveBernard De BaetsYves Van de PeerPierre Rouzé

A1 Journal Article in BIOINFORMATICS

Feature subset selection for splice site prediction by estimation of distribution algorithms

Yvan SaeysSven DegroeveDirk AeyelsYves Van de PeerPierre Rouzé

Genome-wide analysis of core cell cycle genes in Arabidopsis

Klaas VandepoeleJeroen RaesLieven De VeylderPierre RouzéStephane RombautsDirk Inzé

A1 Journal Article in PLANT CELL

INCLUSive: INtegrated Clustering, Upstream of sequence retrieval and motif Sampling

Gert ThijsYves MoreauFrank De SmetJanick MathysMagali LescotStephane RombautsPierre RouzéBart De MoorKathleen Marchal

A1 Journal Article in BIOINFORMATICS

Integrating quality-based clustering of microarray data with Gibbs sampling for the discovery of regulatory motifs

Yves MoreauGert ThijsKathleen MarchalFrank De SmetJanick MathysMagali LescotStephane RombautsPierre RouzéBart De Moor

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences

Magali LescotPatrice DehaisGert ThijsKathleen MarchalYves MoreauYves Van de PeerPierre RouzéStephane Rombauts

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Selecting Relevant Features for Splice Site Prediction by Estimation of Distribution Algorithms.

Yvan SaeysSven DegroeveDirk AeyelsYves Van de PeerPierre Rouzé

The PlantCARE database and tools for in silico search of plant cis-acting regulatory elements

Stephane RombautsMagali LescotGert ThijsKathleen MarchalYves MoreauPatrice DehaisYves Van de PeerPierre Rouzé

2001

A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling

Gert ThijsMagali LescotKathleen MarchalStephane RombautsBart De MoorPierre RouzéYves Moreau

A1 Journal Article in BIOINFORMATICS

Automatic design of gene specific tags for transcriptome studies

Vincent ThareauPatrice DehaisPierre RouzéSebastien Aubourg

EUGÈNE: an eukaryotic gene finder that combines several sources of evidence

Thomas SchiexAnnick MoisanPierre Rouzé

Genome annotation

Sebastien AubourgPierre Rouzé

A1 Journal Article in PLANT PHYSIOLOGY AND BIOCHEMISTRY

In silico search of plant cis-acting regulatory elements

Magali LescotStephane RombautsGert ThijsKathleen MarchalBart De MoorYves MoreauPierre Rouzé

2000

Detection of cis-acting regulatory elements in plants : a GIBBS sampling approach

Gert ThijsStephane RombautsMagali LescotKathleen MarchalBart De MoorYves MoreauPierre Rouzé

EuGène: an eucaryotic gene finder that combines several sources of evidence

T SchiexA MoisanL DuretPierre Rouzé

Gene prediction and gene classes in Arabidopsis thaliana

Catherine MathePatrice DehaisNathalie PavyStephane RombautsMarc Van MontaguPierre Rouzé

A1 Journal Article in JOURNAL OF BIOTECHNOLOGY

PPMdb: a plant plasma membrane database

Ilhem SahnounPatrice DehaisMarc Van MontaguMichel RossignolPierre Rouzé

A1 Journal Article in JOURNAL OF BIOTECHNOLOGY

The sense of naturally transcribed antisense RNAs in plants

Nancy TerrynPierre Rouzé

A1 Journal Article in TRENDS IN PLANT SCIENCE

1999

Bioinformatics: from genome data to knowledge.

A4 Journal Article in MEDEDELINGEN VAN DE FACULTEIT LANDBOUWKUNDIGE EN TOEGEPASTE BIOLOGISCHE WETENSCHAPPEN, UNIVERSITEIT GENT

Classification of Arabidopsis thaliana gene sequences: clustering of coding sequences into two groups according to codon usage improves gene prediction

Catherine MatheAnatoly PeresetskyPatrice DehaisMarc Van MontaguPierre Rouzé

A1 Journal Article in JOURNAL OF MOLECULAR BIOLOGY

Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences

Nathalie PavyStephane RombautsPatrice DehaisCatherine MatheDavuluri VV RamanaPhilippe LeroyPierre Rouzé

A1 Journal Article in BIOINFORMATICS

Evidence for an ancient chromosomal duplication in Arabidopsis thaliana by sequencing and analyzing a 400-kb contig at the APETALA2 locus on chromosome 4

Nancy TerrynLeo HeijnenAnnick De KeyserMartien Van AsseldonckRebecca De ClercqHenk VerbakelJan GielenMarc ZabeauRaimundo Villarroel-MandiolaTaco Jesse et al.

A1 Journal Article in FEBS LETTERS

Genome annotation: which tools do we have for it?

Pierre RouzéNathalie PavyStephane Rombauts

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

Génomique et bio-informatique

Nathalie PavyCatherine MatheStephane RombautsPierre Rouzé

A1 Journal Article in OCL-OLEAGINEUX CORPS GRAS LIPIDES

Informatics and the genome

Maxime CrochemoreAndrzej K KonopkaJean-Loup RislerPierre Rouzé

Editorial material

Nancy TerrynPierre RouzéMarc Van Montagu

A1 Journal Article in FEBS LETTERS

PlantCARE, a plant cis-acting regulatory element database

Stephane RombautsPatrice DehaisMarc Van MontaguPierre Rouzé

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Recognition of gene regulatory sequences by bagging of neural networks

Gert ThijsYves MoreauStephane RombautsBart De MoorPierre Rouzé

1998

Analysis of T-DNA-mediated translational β-glucuronidase gene fusions

Sunee KertbunditRosario LinaceroPierre RouzéIvan GalisJiri MacasFrancine DeboeckSuzy RenckensJean-Pierre HernalsteensHenri De Greve

A1 Journal Article in PLANT MOLECULAR BIOLOGY

Characterization and classification of plant cyclin sequences related to A- and B-type cyclins

JP RenaudinArnould SavouréH PhilippeMarc Van MontaguDirk InzéPierre Rouzé

Bookchapter in Plant cell division

Classification des séquences codantes d'Arabidopsis thaliana

Catherine MatheA PeresetskyPatrice DehaisMarc Van MontaguPierre Rouzé

Cyclin-dependent kinases in plants

Gerda SegersPierre RouzéMarc Van MontaguDirk Inzé

Bookchapter in Plant cell proliferation and its regulation in growth and development

Quantification of heterologous protein levels in transgenic plants by ELISA

Anne BruynsMyriam De NeveGeert De JaegerChris De WildePierre RouzéAnna Depicker

Bookchapter in Recombinant proteins from plants : production and isolation of clinically useful compounds

Sequence analysis of a 40-kb Arabidopsis thaliana genomic region located at the top of chromosome 1

Nancy TerrynJan GielenAnnick De KeyserHilde Van Den DaeleWilson Ardiles DiazPia NeytRebecca De ClercqJeroen CoppietersPatrice DehaisRaimundo Villarroel-Mandiola et al.

A1 Journal Article in GENE

Use of a proteome strategy for tagging proteins present at the plasma membrane

Véronique SantoniDavid RouquiéPatrick DoumasMonique MansionMarc BoutryHervé DegandPaul DupreeLen PackmanJanine SherrierTracy Prime et al.

A1 Journal Article in PLANT JOURNAL

1997

A branch point consensus from Arabidopsis found by non-circular analysis allows for better prediction of acceptor sites

Niels TolstrupPierre RouzéSøren Brunak

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Sequence analysis of a 24-kb contiguous genomic region at the Arabidopsis thaliana PFL locus on chromosome 1

Nancy TerrynPia NeytRebecca De ClercqAnnick De KeyserHilde Van Den DaeleWilson Ardiles DiazPatrice DehaisPierre RouzéJan GielenRaimundo Villarroel-Mandiola et al.

A1 Journal Article in FEBS LETTERS

1996

Cleaning the GenBank Arabidopsis thaliana data set

Peter G KorningStefan M HebsgaardPierre RouzéSøren Brunak

A1 Journal Article in NUCLEIC ACIDS RESEARCH

Exon prediction in eucaryotic genomes

L VignalY d'Aubento-CarafaF LisacekE Mephu NguifoPierre RouzéJ QuinquetonC Thermes

A1 Journal Article in BIOCHIMIE

Gene prediction in Arabidopsis thaliana: genomic sequences

Pierre RouzéStephane RombautsG Van LaereLuc Van WiemeerschMarc Van Montagu

A1 Journal Article in ARCHIVES OF PHYSIOLOGY AND BIOCHEMISTRY

NetPlantGene, a neural network program combining local and global information for efficient prediction of splice sites in Arabidopsis thaliana genomic sequences

Pierre RouzéN TolstrupS Brunak

A1 Journal Article in ARCHIVES OF PHYSIOLOGY AND BIOCHEMISTRY

Non-canonical introns are at least 10⁹ years old

H-J WuP Gaubier-ComellaM DelsenyF GrelletMarc Van MontaguPierre Rouzé

A1 Journal Article in NATURE GENETICS

Nucleotide sequence of the Arabidopsis thaliana gene encoding the G-box-binding factor 1 (GBF1) (Accession number X99941).

Nancy TerrynRaimundo Villarroel-MandiolaPia NeytRebecca De ClercqWilson Ardiles DiazAnnick De KeyserHilde Van Den DaelePierre RouzéJan GielenMarc Van Montagu

A2 Journal Article in PLANT PHYSIOLOGY

Plant cyclins : a unified nomenclature for plant A-, B- and D-type cyclins based on sequence organization

Jean-Pierre RenaudinJohn H DoonanDonna FreemanJunji HashimotoHeribert HirtDirk InzéThomas JacobsHiroshi KouchiPierre RouzéMargret Sauter et al.

A1 Journal Article in PLANT MOLECULAR BIOLOGY

Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information

Stefan M HebsgaardPeter G KorningNiels TolstrupJacob EngelbrechtPierre RouzéSøren Brunak

A1 Journal Article in NUCLEIC ACIDS RESEARCH