Research Explorer

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Researcher

Ludger Goeminne

Awards & Distinctions

15 Results

2020

MSqRob takes the missing hurdle : uniting intensity- and count-based proteomics

Ludger GoeminneAdriaan StickerLennart MartensKris GevaertLieven Clement

A1 Journal Article in ANALYTICAL CHEMISTRY

Robust summarization and inference in proteome-wide label-free quantification

Adriaan StickerLudger GoeminneLennart MartensLieven Clement

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

2019

Robust summarisation and inference for Label-Free Quantification

Adriaan StickerLudger GoeminneLennart MartensLieven Clement

Statistical methods for differential proteomics at peptide and protein level

Ludger GoeminneLieven ClementKris Gevaert

2018

Experimental design and data-analysis in label-free quantitative LC/MS proteomics : a tutorial with MSqRob

Ludger GoeminneKris GevaertLieven Clement

A1 Journal Article in JOURNAL OF PROTEOMICS

Identification of immune-responsive gene 1 (IRG1) as a target of A20

Emmy Van QuickelbergheArne MartensLudger GoeminneLieven ClementGeert van LooKris Gevaert

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

2017

A leap over the hurdle in label-free quantitative proteomics

Ludger GoeminneKris GevaertLieven Clement

Analyzing repeated measures designs in label-free proteomics with MSqRob (MCP 2016 15(2):657-68.)

Lieven ClementLudger GoeminneEmmy Van QuickelbergheKris Gevaert

MSqRob : analysis of label-free proteomics data in an R/Shiny environment

Ludger GoeminneKris GevaertLieven Clement

MSqRob: analysis of label-free proteomics data in an R/Shiny environment

Ludger GoeminneEmmy Van QuickelbergheKris GevaertLieven Clement

2016

Peptide-level robust ridge regression improves estimation, sensitivity, and specificity in data-dependent quantitative label-free shotgun proteomics

Ludger GoeminneKris GevaertLieven Clement

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

moFF : a robust and automated approach to extract peptide ion intensities

Andrea ArgentiniLudger GoeminneKenneth VerheggenNiels HulstaertAn StaesLieven ClementLennart Martens

A1 Journal Article in NATURE METHODS

2015

Peptide-level robust ridge regression modeling improves both sensitivity and specificity in quantitative proteomics

Ludger GoeminneLieven ClementKris GevaertKlaas Vandepoele

Robust peptide-based models in quantitative proteomics

Ludger GoeminneKlaas VandepoeleKris GevaertLieven Clement

Summarization vs. peptide-based models in label-free quantitative proteomics : performance, pitfalls, and data analysis guidelines

Ludger GoeminneAndrea ArgentiniLennart MartensLieven Clement

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH