Research Explorer

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Researcher

Luca Renders

Publications & Research Data

Awards & Distinctions

11 Results

2025

Approximate sequence alignment using search schemes

Luca RendersJan FostierKathleen Marchal

b-move : faster lossless approximate pattern matching in a run-length compressed index

Lore DepuydtLuca RendersSimon Van de VyverLennart VeysTravis GagieJan Fostier

A1 Journal Article in ALGORITHMS FOR MOLECULAR BIOLOGY

Columba: fast approximate pattern matching with optimized search schemes

Luca RendersLore DepuydtTravis GagieJan Fostier

U Journal Article in BIOINFORMATICS

Search schemes for approximate pattern matching : an overview

Lore DepuydtJan FostierSimon GottliebGregory KucherovKnut ReinertLuca Renders

Bookchapter in The Expanding World of Compressed Data : A Festschrift for Giovanni Manzini's 60th Birthday

2024

Automated design of efficient search schemes for lossless approximate pattern matching

Luca RendersLore DepuydtSven RahmannJan Fostier

B-move : faster bidirectional character extensions in a run-length compressed index

Lore DepuydtLuca RendersSimon Van de VyverLennart VeysT. GagieJan Fostier

Lossless approximate pattern matching : automated design of efficient search schemes

Luca RendersLore DepuydtSven RahmannJan Fostier

A1 Journal Article in JOURNAL OF COMPUTATIONAL BIOLOGY

2023

Pan-genome de Bruijn graph using the bidirectional FM-index

Lore DepuydtLuca RendersThomas AbeelJan Fostier

A1 Journal Article in BMC BIOINFORMATICS

2022

Approximate pattern matching using search schemes and in-text verification

Luca RendersLore DepuydtJan Fostier

Approximate pattern matching using search schemes and in-text verification

Luca RendersLore DepuydtJan Fostier

2021

Dynamic partitioning of search patterns for approximate pattern matching using search schemes

Luca RendersKathleen MarchalJan Fostier

A1 Journal Article in ISCIENCE