Research Explorer

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Researcher

Lieven Verbeke

Awards & Distinctions

51 Results

2020

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Esther RheinbayMorten Muhlig NielsenFederico AbascalJeremiah A WalaOfer ShapiraGrace TiaoHenrik HornshøjJulian M HessRandi Istrup JuulZiao Lin et al.

A1 Journal Article in NATURE

Integrative pathway enrichment analysis of multivariate omics data

Marta PaczkowskaJonathan BarenboimNardnisa SintupisutNatalie S FoxHelen ZhuDiala Abd-RabboMiles W MeePaul C BoutrosJüri Reimandthe PCAWG Drivers and Functional Interpretation Working Group et al.

A1 Journal Article in NATURE COMMUNICATIONS

Pathway and network analysis of more than 2500 whole cancer genomes

Matthew A ReynaDavid HaanMarta PaczkowskaLieven VerbekeMiguel VazquezAbdullah KahramanSergio Pulido-TamayoJonathan BarenboimLina WadiPriyanka Dhingra et al.

A1 Journal Article in NATURE COMMUNICATIONS

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

Matthew H. BaileyWilliam U. MeyersonLewis Jonathan DursiLiang-Bo WangGuanlan DongWen-Wei LiangAmila WeerasingheShantao LiYize LiSean Kelso et al.

A1 Journal Article in NATURE COMMUNICATIONS

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (vol 11, 4748, 2020)

Matthew H. BaileyWilliam U. MeyersonLewis Jonathan DursiLiang-Bo WangGuanlan DongWen-Wei LiangAmila WeerasingheShantao LiYize LiSean Kelso et al.

Sex differences in oncogenic mutational processes

Constance H. LiStephenie D. ProkopecRen X. SunFouad YousifNathaniel SchmitzPaul C. BoutrosSergio Pulido TamayoKathleen MarchalLieven Verbeke[missing] PCAWG Tumour Subtypes and Clinical Translation et al.

A1 Journal Article in NATURE COMMUNICATIONS

2019

Associating expression and genomic data using co-occurrence measures

Maarten LarmuseauLieven VerbekeKathleen Marchal

A1 Journal Article in BIOLOGY DIRECT

2017

Network-based integration of systems genetics data reveals pathways associated with lignocellulosic biomass accumulation and processing

Eshchar MizrachiLieven VerbekeNanette ChristieAna Carolina Elisa Fierro GutierrezShawn D MansfieldMark F DavisErica GjersingGerald A TuskanMarc Van MontaguYves Van de Peer et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Principles of systems biology, no. 14 : [...] Network analysis of woody biomass

Eshchar MizrachiLieven VerbekeYves Van de PeerKathleen MarchalAlexander A Myburg

Editorial material

Random walks on mutual microRNA-target gene interaction network improve the prediction of disease-associated microRNAs

Duc-Hau Le Duc-Hau LeLieven VerbekeLe Hoang Son Le Hoang SonDinh-Toi Chu Dinh-Toi ChuVan-Huy Pham Van-Huy Pham

A1 Journal Article in BMC BIOINFORMATICS

2016

Network-guided data integration and gene prioritization

Lieven VerbekeJan FostierKathleen Marchal

Simultaneous discovery of cancer subtypes and subtype features by molecular data integration

Thanh Le VanMatthijs van LeeuwenAna Carolina Elisa Fierro GutierrezDries De MaeyerJimmy Van den EyndenLieven VerbekeLuc De RaedtKathleen MarchalSiegfries Nijssen

A1 Journal Article in BIOINFORMATICS

2015

Pathway relevance ranking for tumor samples through network-based data integration

Lieven VerbekeJimmy Van den EyndenAna Carolina Elisa Fierro GutierrezPiet DemeesterJan FostierKathleen Marchal

A1 Journal Article in PLOS ONE

Pathway relevance ranking for tumor samples through network-based data integration (award for Outstanding Oral Poster Presentation )

Lieven VerbekeJimmy Van den EyndenPiet DemeesterKathleen MarchalJan Fostier

SomInaClust: detection of cancer genes based on somatic mutation patterns of inactivation and clustering

Jimmy Van den EyndenAna Carolina Elisa Fierro GutierrezLieven VerbekeKathleen Marchal

A1 Journal Article in BMC BIOINFORMATICS

Studying the relationship between drug resistance and genomic variations in Leishmania donovani using a network-based method

MR Ticlla CcenhuaS Pulido-TamayoH ImamuraLieven VerbekeJ CottonJ-C DujardinKathleen Marchal

2014

Variability of operator performance in remote-sensing image interpretation: the importance of human and external factors

Frieke VancoillieSoetkin GardinFrederik AnseelWouter DuyckLieven VerbekeRobert De Wulf

A1 Journal Article in INTERNATIONAL JOURNAL OF REMOTE SENSING

2013

Directional local filtering for stand density estimation in closed forest canopies using VHR optical and LiDAR data

Frieke VancoillieFlore DevriendtLieven VerbekeRobert De Wulf

A1 Journal Article in IEEE GEOSCIENCE AND REMOTE SENSING LETTERS

EPSILON: an eQTL prioritization framework using similarity measures derived from local networks

Lieven VerbekePiet DemeesterJan FostierKathleen Marchal

EPSILON: an eQTL prioritization framework using similarity measures derived from local networks

Lieven VerbekeLore ClootsPiet DemeesterJan FostierKathleen Marchal

A1 Journal Article in BIOINFORMATICS

Identifying relevant pathways for different breast cancer subtypes using network based data integration

Lieven VerbekeAC FierroJimmy Van den EyndenPiet DemeesterJan FostierKathleen Marchal

2012

Exploring the complementarity of eQTL mapping methods (poster)

Lieven VerbekeKathleen MarchalJan Fostier

2011

Influence of different topographic correction strategies on mountain vegetation classification accuracy in the Lancang Watershed, China

Zhiming ZhangRobert De WulfFrieke VancoillieLieven VerbekeEva De ClercqXiaokun Ou

A1 Journal Article in JOURNAL OF APPLIED REMOTE SENSING

Remote sensing meets psychology: a concept for operator performance assessment

Soetkin GardinSébastien Van LaereFrieke VancoillieFrederik AnseelWouter DuyckRobert De WulfLieven Verbeke

A1 Journal Article in REMOTE SENSING LETTERS

Training neural networks on artificially generated data: a novel approach to SAR speckle removal

Frieke VancoillieHans LievensIsabelle JoosAleksandra PizuricaLieven VerbekeRobert De WulfNiko Verhoest

A1 Journal Article in INTERNATIONAL JOURNAL OF REMOTE SENSING

Wavelet-based texture measures for semicontinuous stand density estimation from very high resolution optical imagery

Frieke VancoillieLieven VerbekeRobert De Wulf

A1 Journal Article in JOURNAL OF APPLIED REMOTE SENSING

2010

A neural network approach to topsoil clay prediction using an EMI-based soil sensor

Liesbet CockxMarc Van MeirvenneUWA VitharanaFrieke VancoillieLieven VerbekeDavid SimpsonTimothy Saey

2009

Extracting topsoil information from EM38DD sensor data using a neural network approach

Liesbet CockxMarc Van MeirvenneUWA VitharanaLieven VerbekeDavid SimpsonTimothy SaeyFrieke Vancoillie

A1 Journal Article in SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

SAR speckle removal by neural networks trained on artificially generated data

Frieke VancoillieHans LievensIsabelle JoosAleksandra PizuricaLieven VerbekeRobert De WulfNiko Verhoest

2008

Mapping dominant vegetation communities at Meili Snow Mountain, Yunnan Province, China using satellite imagery and plant community data

Zhiming ZhangEva De ClercqXiaoKun OuRobert De WulfLieven Verbeke

A2 Journal Article in GEOCARTO INTERNATIONAL

Semi-automated forest stand delineation using wavelet based segmentation of very high resolution optical imagery

Frieke VancoillieLieven VerbekeRobert De Wulf

Bookchapter in Object-based image analysis : spatial concepts for knowledge-driven remote sensing applications

2007

Feature selection by genetic algorithms in object-based classification of IKONOS imagery for forest mapping in Flanders, Belgium

Frieke VancoillieLieven VerbekeRobert De Wulf

A1 Journal Article in REMOTE SENSING OF ENVIRONMENT

Forest stand delineation: texture versus shape

Frieke VancoillieLieven VerbekeRobert De Wulf

Vegetation change detection using artificial neural networks with ancillary data in Xishuangbanna, Yunnan Province, China

Zhang ZhiMingLieven VerbekeEva De ClercqOu XiakunRobert De Wulf

A1 Journal Article in CHINESE SCIENCE BULLETIN

2006

A sub-pixel mapping algorithm based on sub-pixel/pixel spatial attraction models

Koen C MertensBernard De BaetsLieven VerbekeRobert De Wulf

A1 Journal Article in INTERNATIONAL JOURNAL OF REMOTE SENSING

Object based forest stand density estimation from very high resolution optical imagery using wavelet based texture measures

Lieven VerbekeFrieke VancoillieRobert De Wulf

Semi-automated forest stand delineation using wavelet-based segmentation of very high resolution optical imagery in Flanders, Belgium

Frieke VancoillieLieven VerbekeRobert De Wulf

Sub-pixel mapping : a comparison of techniques

Koen MertensLieven VerbekeRobert De Wulf

2005

A directional variant of the local maximum filter for stand density estimation from IKONOS imagery

Lieven VerbekeFrieke VancoillieRobert De Wulf

GA Driven feature selection in object-based classification for forest mapping with IKONOS imagery in Flanders, Belgium

Frieke VancoillieLieven VerbekeRobert De Wulf

GA-Driven feature selection in object-based classification for forest mapping with IKONOS imagery in Flanders, Belgium

Frieke VancoillieLieven VerbekeRobert De Wulf

2004

Direct sub-pixel mapping exploiting spatial dependence

Koen MertensBernard De BaetsLieven VerbekeRobert De Wulf

Previously trained neural networks as building blocks for a new classifier: improving classification performance by knowledge transfer

Lieven VerbekeFrieke VancoillieRobert De Wulf

Previously trained neural networks as ensemble members: knowledge extraction and transfer

Frieke VancoillieLieven VerbekeRobert De Wulf

A1 Journal Article in INTERNATIONAL JOURNAL OF REMOTE SENSING

Reusing back-propagation artificial neural networks for land cover classification in tropical savannahs

Lieven VerbekeFrieke VancoillieRobert De Wulf

A1 Journal Article in INTERNATIONAL JOURNAL OF REMOTE SENSING

Sub-pixel mapping and sub-pixel sharpening using neural network predicted wavelet coefficients

Koen MertensLieven VerbekeToon WestraRobert De Wulf

A1 Journal Article in REMOTE SENSING OF ENVIRONMENT

WordGen: a tool for word selection and nonword generation in Dutch, English, German, and French

Wouter DuyckTimothy DesmetLieven VerbekeMarc Brysbaert

A1 Journal Article in BEHAVIOR RESEARCH METHODS INSTRUMENTS & COMPUTERS

2003

A zoning plan for Cat Ba National Park, Vietnam

F DanckaertFrieke VancoillieLieven VerbekeRobert De Wulf

Sub-pixel mapping with neural networks : real-world spatial configurations learned from artificial shapes

Koen MertensLieven VerbekeRobert De Wulf

Using genetic algorithms in sub-pixel mapping

Koen MertensLieven VerbekeEI DucheyneRobert De Wulf

A1 Journal Article in INTERNATIONAL JOURNAL OF REMOTE SENSING

2001

Artificial neural network training for savanna vegetation mapping: transferring previously learned experience to new learning tasks

Frieke VancoillieLieven VerbekeRobert De Wulf