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Researcher
Lieven Sterck
Profile
Projects
Publications
Activities
Awards & Distinctions
61
Results
2024
The Plant PTM Viewer 2.0 : in-depth exploration of plant protein modification landscapes
Patrick Willems
Lieven Sterck
Avilien Dard
Jingjing Huang
Ive De Smet
Kris Gevaert
Frank Van Breusegem
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2024
The Plant PTM Viewer 2.0: in-depth exploration of plant protein modification landscapes
Patrick Willems
Lieven Sterck
Avilien Dard
Jingjing Huang
Ive De Smet
Kris Gevaert
Frank Van Breusegem
U
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2024
Transcriptional chronology reveals conserved genes involved in pennate diatom sexual reproduction
Sien Audoor
Gust Bilcke
Katerina Pargana
Darja Belišová
Sander Thierens
Michiel Van Bel
Lieven Sterck
Nadine Rijsdijk
Rossella Annunziata
Maria Immacolata Ferrante
et al.
A1
Journal Article
in
MOLECULAR ECOLOGY
2024
2023
ABCB‐mediated shootward auxin transport feeds into the root clock
Jian Chen
Yangjie Hu
Pengchao Hao
Tashi Tsering
Jian Xia
Yuqin Zhang
Ohad Roth
Maria Njo
Lieven Sterck
Yun Hu
et al.
A1
Journal Article
in
EMBO REPORTS
2023
2022
Adenosine monophosphate deaminase modulates BIN2 activity through hydrogen peroxide-induced oligomerization
Qing Lu
Anaxi Houbaert
Qian Ma
Jingjing Huang
Lieven Sterck
Cheng Zhang
René Benjamins
Frederik Coppens
Frank Van Breusegem
Eugenia Russinova
A1
Journal Article
in
PLANT CELL
2022
Maritime pine genomics in focus
Lieven Sterck
Nuria de María
Rafael A. Cañas
Marina de Miguel
Pedro Perdiguero
Annie Raffin
Katharina B. Budde
Miriam López-Hinojosa
Francisco R. Cantón
Andreia S. Rodrigues
et al.
Bookchapter
in
The Pine Genomes
2022
Self-incompatibility requires GPI anchor remodeling by the poppy PGAP1 ortholog HLD1
Zongcheng Lin
Fei Xie
Marina Muñoz Triviño
Tao Zhao
Frederik Coppens
Lieven Sterck
Maurice Bosch
Vernonica E. Franklin-Tong
Moritz Nowack
A1
Journal Article
in
CURRENT BIOLOGY
2022
Whole-genome sequences of two Kazachstania barnettii strains isolated from anthropic environments
Hugo Devillers
Véronique Sarilar
Cécile Grondin
Lieven Sterck
Diego Segond
Noémie Jacques
Delphine Sicard
Serge Casaregola
Colin Tinsley
A1
Journal Article
in
GENOME BIOLOGY AND EVOLUTION
2022
2021
Insights into the mechanisms implicated in Pinus pinaster resistance to pinewood nematode
Inês Sofia Barrios Modesto
Lieven Sterck
Vicent Arbona
Aurelio Gómez-Cadenas
Isabel Carrasquinho
Yves Van de Peer
Célia M. Miguel
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2021
2020
De novo assembly of transcriptomes from a B73 maize line introgressed with a QTL for resistance to gray leaf spot disease reveals a candidate allele of a lectin receptor-like kinase
Tanya Welgemoed
Rian Pierneef
Lieven Sterck
Yves Van de Peer
Velushka Swart
Kevin Daniel Scheepers
Dave K. Berger
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2020
First draft genome assembly of the desert locust, Schistocerca gregaria
Heleen Verlinden
Lieven Sterck
Jia Li
Zhen Li
Anna Yssel
Yannick Gansemans
Rik Verdonck
Michiel Holtof
Hojun Song
Spencer T. Behmer
et al.
A2
Journal Article
in
F1000RESEARCH
2020
Genomics of clinal local adaptation in Pinus sylvestris under continuous environmental and spatial genetic setting
Jaakko S. Tyrmi
Jaana Vuosku
Juan J. Acosta
Zhen Li
Lieven Sterck
Maria T. Cervera
Outi Savolainen
Tanja Pyhäjärvi
A1
Journal Article
in
G3-GENES GENOMES GENETICS
2020
Molecular study of drought response in the Mediterranean conifer Pinus Pinaster Ait. : differential transcriptomic profiling reveals constitutive water deficit‐independent drought tolerance mechanisms
Nuria de María
María Ángeles Guevara
Pedro Perdiguero
María Dolores Vélez
José Antonio Cabezas
Miriam López‐Hinojosa
Zhen Li
Luís Manuel Díaz
Alberto Pizarro
José Antonio Mancha
et al.
A1
Journal Article
in
ECOLOGY AND EVOLUTION
2020
The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms
Cristina Osuna
Gust Bilcke
Emmelien Vancaester
Sam De Decker
Atle M. Bones
Per Winge
Nicole Poulsen
Petra Bulánková
Bram Verhelst
Sien Audoor
et al.
A1
Journal Article
in
NATURE COMMUNICATIONS
2020
The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms (vol 11, 3320, 2020)
Cristina Maria Osuna Cruz
Gust Bilcke
Emmelien Vancaester
Sam De Decker
Atle M. Bones
Per Winge
Nicole Poulsen
Petra Bulánková
Bram Verhelst
Sien Audoor
et al.
Correction
2020
instaGRAAL : chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder
Lyam Baudry
Nadège Guiglielmoni
Hervé Marie-Nelly
Alexandre Cormier
Martial Marbouty
Komlan Avia
Yann Loe Mie
Olivier Godfroy
Lieven Sterck
J. Mark Cock
et al.
A1
Journal Article
in
GENOME BIOLOGY
2020
2019
ORCAE-AOCC : a centralized portal for the annotation of African orphan crop genomes
Anna EJ Yssel
Shu-Min Kao
Yves Van de Peer
Lieven Sterck
A1
Journal Article
in
GENES
2019
2018
Insights into the evolution of multicellularity from the sea lettuce genome
Olivier De Clerck
Shu-Min Kao
Kenny Bogaert
Jonas Blomme
Fatima Foflonker
Michiel Kwantes
Emmelien Vancaester
Lisa Vanderstraeten
Eylem Aydogdu Lohaus
Jens Boesger
et al.
A1
Journal Article
in
CURRENT BIOLOGY
2018
Ten steps to get started in Genome Assembly and Annotation
Victoria Dominguez Del Angel
Erik Hjerde
Lieven Sterck
Salvadors Capella-Gutierrez
Cederic Notredame
Olga Vinnere Pettersson
Joelle Amselem
Laurent Bouri
Stephanie Bocs
Christophe Klopp
et al.
A2
Journal Article
in
F1000RESEARCH
2018
2017
Evidence for an ancient whole genome duplication in the cycad lineage
Danielle Roodt
Rolf Lohaus
Lieven Sterck
Riaan L Swanepoel
Yves Van de Peer
Eshchar Mizrachi
A1
Journal Article
in
PLOS ONE
2017
Functional classification of protein toxins as a basis for bioinformatic screening
Surendra S Negi
Catherine H Schein
Gregory S Ladics
Henry Mirsky
Peter Chang
Jean-Baptiste Rascle
John Kough
Lieven Sterck
Sabitha Papineni
Joseph M Jez
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2017
Genome of wild olive and the evolution of oil biosynthesis
Turgay Unver
Zhangyan Wu
Lieven Sterck
Mine Turktas
Rolf Lohaus
Zhen Li
Ming Yang
Lijuan He
Tianquan Deng
Francisco Javier Escalante
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2017
Genome sequence of the type strain CLIB 1764T (= CBS 14374T) of the yeast species Kazachstania saulgeensis isolated from French organic sourdough
Véronique Sarilar
Lieven Sterck
Saki Matsumoto
Noémie Jacques
Cécile Neuvéglise
Colin R Tinsley
Delphine Sicard
Serge Casaregola
A2
Journal Article
in
GENOMICS DATA
2017
Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus
Alexandre Cormier
Komlan Avia
Lieven Sterck
Thomas Derrien
Valentin Wucher
Gwendoline Andres
Misharl Monsoor
Olivier Godfroy
Agnieszka Lipinska
Marie-Mathilde Perrineau
et al.
A1
Journal Article
in
NEW PHYTOLOGIST
2017
Single-copy genes as molecular markers for phylogenomic studies in seed plants
Zhen Li
Amanda R De La Torre
Lieven Sterck
Francisco M Cánovas
Concepción Avila
Irene Merino
Jose Antonio Cabezas
María Teresa Cervera
Par K Ingvarsson
Yves Van de Peer
A1
Journal Article
in
GENOME BIOLOGY AND EVOLUTION
2017
The gene expression landscape of pine seedling tissues
Rafael A Cañas
Zhen Li
M Belén Pascual
Vanessa Castro-Rodríguez
Concepción Ávila
Lieven Sterck
Yves Van de Peer
Francisco M Cánovas
A1
Journal Article
in
PLANT JOURNAL
2017
2016
Transcript profiling for early stages during embryo development in Scots pine
Irene Merino
Malin Abrahamsson
Lieven Sterck
Blanca Craven-Bartle
Francisco Canovas
Sara von Arnold
A1
Journal Article
in
BMC PLANT BIOLOGY
2016
Transcriptomic responses of a simplified soil microcosm to a plant pathogen and its biocontrol agent reveal a complex reaction to harsh habitat
Michele Perazzolli
Noemí Herrero
Lieven Sterck
Luisa Lenzi
Alberto Pellegrini
Gerardo Puopolo
Yves Van de Peer
Ilaria Pertot
A1
Journal Article
in
BMC GENOMICS
2016
2015
Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts
Guillaume Morel
Lieven Sterck
Dominique Swennen
Marina Marcet-Houben
Djamila Onesime
Anthony Levasseur
Noémie Jacques
Sandrine Mallet
Arnaux Couloux
Karine Labadie
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2015
Exploration of alternative splicing events in ten different grapevine cultivars
Emilio Potenza
Milvia Luisa Racchi
Lieven Sterck
Emanuela Coller
Elisa Asquini
Silvio CE Tosatto
Riccardo Velasco
Yves Van de Peer
Alessandro Cestaro
A1
Journal Article
in
BMC GENOMICS
2015
Horsetails are ancient polyploids : evidence from Equisetum giganteum
Kevin Vanneste
Lieven Sterck
Alexander Andrew Myburg
Yves Van de Peer
Eshchar Mizrachi
A1
Journal Article
in
PLANT CELL
2015
2014
A haploid system of sex determination in the brown alga Ectocarpus sp.
Sophia Ahmed
J Mark Cock
Eugenie Pessia
Remy Luthringer
Alexandre Cormier
Marine Robuchon
Lieven Sterck
Akira F Peters
Simon M Dittami
Erwan Corre
et al.
A1
Journal Article
in
CURRENT BIOLOGY
2014
Fast and accurate cDNA mapping and splice site identification
Michaël Vyverman
Dieter De Smedt
Yao-Cheng Lin
Lieven Sterck
Bernard De Baets
Veerle Fack
Peter Dawyndt
P1
Conference
2014
The genome of Eucalyptus grandis
Alexander A Myburg
Dario Grattapaglia
Gerald A Tuskan
Uffe Hellsten
Richard D Hayes
Jane Grimwood
Jerry Jenkins
Erika Lindquist
Hope Tice
Diane Bauer
et al.
A1
Journal Article
in
NATURE
2014
2013
Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne
Tom Ruttink
Lieven Sterck
Antje Rohde
Christian Bendixen
Pierre Rouzé
Torben Asp
Yves Van de Peer
Isabel Roldán-Ruiz
A1
Journal Article
in
PLANT BIOTECHNOLOGY JOURNAL
2013
2012
Deconstruction of the (paleo)polyploid grapevine genome based on the analysis of transposition events involving NBS resistance genes
Giulia Malacarne
Michele Perazzolli
Alessandro Cestaro
Lieven Sterck
Paolo Fontana
Yves Van de Peer
Roberto Viola
Riccardo Velasco
Francesco Salamini
A1
Journal Article
in
PLOS ONE
2012
Development of an SNP Identification Pipeline for Highly Heterozygous Crops
Tom Ruttink
Lieven Sterck
Elke Vermeulen
Antje Rohde
Isabel Roldán-Ruiz
C1
Conference
2012
Highly dynamic exon shuffling in candidate pathogen receptors... : what if brown algae were capable of adaptive immunity?
Antonios Zambounis
Marek Elias
Lieven Sterck
Florian Maumus
Claire MM Gachon
A1
Journal Article
in
MOLECULAR BIOLOGY AND EVOLUTION
2012
ORCAE: online resource for community annotation of eukaryotes
Lieven Sterck
Kenny Billiau
Thomas Abeel
Pierre Rouzé
Yves Van de Peer
A1
Journal Article
in
NATURE METHODS
2012
The Ectocarpus genome and brown algal genomics : the Ectocarpus Genome Consortium
J Mark Cock
Lieven Sterck
Sophia Ahmed
Andrew E Allen
Grigoris Amoutzias
Veronique Anthouard
François Artiguenave
Alok Arun
Jean-Marc Aury
Jonathan H Badger
et al.
A1
Journal Article
in
Advances in Botanical Research
2012
2011
A molecular insight into algal-oomycete warfare: cDNA analysis of Ectocarpus siliculosus infected with the basal oomycete Eurychasma dicksonii
Laura Grenville-Briggs
Claire MM Gachon
Martina Strittmatter
Lieven Sterck
Frithjof C Küpper
Pieter van West
A1
Journal Article
in
PLOS ONE
2011
In silico survey of the mitochondrial protein uptake and maturation systems in the brown alga Ectocarpus siliculosus
Ludovic Delage
Catherine Leblanc
Pi Nyvall Collén
Bernhard Gschloessl
Marie-Pierre Oudot
Lieven Sterck
Julie Poulain
Jean-Marc Aury
Mark J Cock
A1
Journal Article
in
PLOS ONE
2011
Nature, nurture and the structure of macroalgal genomes
J Mark Cock
Jonas Collén
Lieven Sterck
Pierre Rouzé
Delphine Scornet
Veronique Anthouard
François Artiguenave
Jean-Marie Aury
Kenny Billiau
Eric Bonnet
et al.
C3
Conference
2011
The Medicago genome provides insight into the evolution of rhizobial symbioses
Nevin D Young
Frédéric Debellé
Giles ED Oldroyd
Rene Geurts
Steven B Cannon
Michael K Udvardi
Vagner A Benedito
Klaus FX Mayer
Jérôme Gouzy
Heiko Schoof
et al.
A1
Journal Article
in
NATURE
2011
2010
The Ectocarpus genome and the independent evolution of multicellularity in brown algae
J Mark Cock
Lieven Sterck
Pierre Rouzé
Delphine Scornet
Andrew E Allen
Grigoris Amoutzias
Véronique Anthouard
François Artiguenave
Jean-Marc Aury
Jonathan H Badger
et al.
A1
Journal Article
in
NATURE
2010
The genome of the domesticated apple (Malus x domestica Borkh.)
Riccardo Velasco
Andrey Zharkikh
Jason Affourtit
Amit Dhingra
Alessandro Cestaro
Ananth Kalyanaraman
Paolo Fontana
Satish K Bhatnagar
Michela Troggio
Dmitry Pruss
et al.
A1
Journal Article
in
NATURE GENETICS
2010
2009
Evolution of multicellularity in the heterokont lineage : analysis of the Ectocarpus siliculosus genome sequence
J Mark Cock
Delphine Scornet
Akira F Peters
Lieven Sterck
Pierre Rouzé
Yves Van de Peer
Jean Weissenbach
Patrick Wincker
C3
Conference
2009
Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress
Simon Dittami
Delphine Scornet
Jean-Louis Petit
Béatrice Ségurens
Corinne Da Silva
Erwan Corre
Michael Dondrup
Karl-Heinz Glatting
Rainer König
Lieven Sterck
et al.
A1
Journal Article
in
Genome Biology
2009
PLAZA : a comparative genomics resource to study gene and genome evolution in plants
Sebastian Proost
Michiel Van Bel
Lieven Sterck
Kenny Billiau
Thomas Van Parys
Yves Van de Peer
Klaas Vandepoele
A1
Journal Article
in
PLANT CELL
2009
The flowering world: a tale of duplications
Yves Van de Peer
Jeffrey Fawcett
Sebastian Proost
Lieven Sterck
Klaas Vandepoele
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2009
2008
Genome annotation in plants and fungi: EuGène as a model platform
Sylvain Foissac
Jérôme Gouzy
Stephane Rombauts
Catherine Mathé
Joëlle Amselem
Lieven Sterck
Yves Van de Peer
Pierre Rouzé
Thomas Schiex
A1
Journal Article
in
CURRENT BIOINFORMATICS
2008
Unravelling the complexity of eukaryotic genomes through gene annotation and evolutionary analysis
Lieven Sterck
Yves Van de Peer
Dissertation
2008
i-ADHoRe 2.0: an improved tool to detect degenerated genomic homology using genomic profiles
Cedric Simillion
Koen Janssens
Lieven Sterck
Yves Van de Peer
A1
Journal Article
in
BIOINFORMATICS
2008
2007
A high quality draft consensus sequence of the genome of a heterozygous grapevine variety
Riccardo Velasco
Andrey Zharkikh
Michela Troggio
Dustin A Cartwright
Alessandro Cestaro
Dmitry Pruss
Massimo Pindo
Lisa M FitzGerald
Silvia Vezzulli
Julia Reid
et al.
A1
Journal Article
in
PLOS ONE
2007
Gene expression during the induction, maintenance, and release of dormancy in apical buds of poplar
Antje Rohde
Tom Ruttink
Vanessa Hostyn
Lieven Sterck
Klara Van Driessche
Wout Boerjan
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2007
How many genes are there in plants (... and why are they there)?
Lieven Sterck
Stephane Rombauts
Klaas Vandepoele
Pierre Rouzé
Yves Van de Peer
A1
Journal Article
in
CURRENT OPINION IN PLANT BIOLOGY
2007
The annotation and analysis of the genome of Arabidopsis lyrata
Jeffrey Fawcett
Stephane Rombauts
Pedro Pattyn
Lieven Sterck
Yves Van de Peer
C3
Conference
2007
2006
Genetical metabolomics of flavonoid biosynthesis in Populus : a case study
Kris Morreel
Geert Goeminne
Veronique Storme
Lieven Sterck
John Ralph
Wouter Coppieters
Peter Breyne
Marijke Steenackers
Michel Georges
Eric Messens
et al.
A1
Journal Article
in
PLANT JOURNAL
2006
Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes
Steven B Cannon
Lieven Sterck
Stephane Rombauts
Shusei Sato
Foo Cheung
Jérôme Gouzy
Xiaohong Wang
Joann Mudge
Jayprakash Vasdewani
Thomas Schiex
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2006
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
GA Tuskan
S DiFazio
S Jansson
J Bohlmann
I Grigoriev
U Hellsten
N Putnam
S Ralph
Stephane Rombauts
A Salamov
et al.
A1
Journal Article
in
SCIENCE
2006
2005
EST data suggest that poplar is an ancient polyploid
Lieven Sterck
Stephane Rombauts
Stefan Jansson
Fredrik Sterky
Pierre Rouzé
Yves Van de Peer
A1
Journal Article
in
NEW PHYTOLOGIST
2005