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Researcher
Joris Vankerschaver
Profile
Projects
Publications
Activities
Awards & Distinctions
39
Results
2024
Assessing the reliability of point mutation as data augmentation for deep learning with genomic data
Hyunjung Lee
Utku Özbulak
Homin Park
Stephen Depuydt
Wesley De Neve
Joris Vankerschaver
U
Journal Article
in
BMC Bioinformatics
2024
The influence of pH on the efficacy of oxidation-reduction potential (ORP) to predict chlorine disinfection of surrogate bacteria, Escherichia coli O157:H7 and Listeria monocytogenes in oxidant demand free conditions and fresh produce wash water
Kimberly Gongora
Joris Vankerschaver
Imca Sampers
Sam Van Haute
U
Journal Article
in
Food Microbiology
2024
Towards abdominal 3-D scene rendering from laparoscopy surgical videos using NeRFs
Khoa Tuan Nguyen
Francesca Tozzi
Nikdokht Rashidian
Wouter Willaert
Joris Vankerschaver
Wesley De Neve
P1
Conference
2024
2023
CRISPR-Cas-Docker : web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins
Homin Park
Jong Bum Won
Yunseol Park
Esla Timothy Anzaku
Joris Vankerschaver
Arnout Van Messem
Wesley De Neve
Hyunjin Shim
A1
Journal Article
in
BMC BIOINFORMATICS
2023
How to make sense of 3D representations for plant phenotyping : a compendium of processing and analysis techniques
Negin Harandi
Breght Vandenberghe
Joris Vankerschaver
Stephen Depuydt
Arnout Van Messem
A1
Journal Article
in
PLANT METHODS
2023
Know your self-supervised learning : a survey on image-based generative and discriminative training
Utku Özbulak
Hyun Jung Lee
Beril Boga
Esla Timothy Anzaku
Homin Park
Arnout Van Messem
Wesley De Neve
Joris Vankerschaver
A2
Journal Article
in
TRANSACTIONS ON MACHINE LEARNING RESEARCH
2023
Mutate and observe : utilizing deep neural networks to investigate the impact of mutations on translation initiation
Utku Özbulak
Hyun Jung Lee
Jasper Zuallaert
Wesley De Neve
Stephen Depuydt
Joris Vankerschaver
A1
Journal Article
in
BIOINFORMATICS
2023
2022
Feedback integrators for mechanical systems with holonomic constraints
Dong Eui Chang
Matthew Perlmutter
Joris Vankerschaver
A1
Journal Article
in
SENSORS
2022
In silico optimization of RNA-protein interactions for CRISPR-Cas13-based antimicrobials
Homin Park
Yunseol Park
Urta Berani
Eunkyu Bang
Joris Vankerschaver
Arnout Van Messem
Wesley De Neve
Hyunjin Shim
A1
Journal Article
in
BIOLOGY DIRECT
2022
Rethinking protein drug design with highly accurate structure prediction of anti-CRISPR proteins
Homin Park
Yunseol Park
Joris Vankerschaver
Arnout Van Messem
Wesley De Neve
Hyunjin Shim
A1
Journal Article
in
PHARMACEUTICALS
2022
Utilizing mutations to evaluate interpretability of neural networks on genomic data
Utku Özbulak
Solha Kang
Jasper Zuallaert
Stephen Depuydt
Joris Vankerschaver
C1
Conference
2022
VPsearch : fast exact sequence similarity search forgenomic sequences
Joris Vankerschaver
Steven J. Kern
Robert Kern
A2
Journal Article
in
JOURNAL OF OPEN SOURCE SOFTWARE
2022
2014
A distance on curves modulo rigid transformations
Jaap Eldering
Joris Vankerschaver
A1
Journal Article
in
DIFFERENTIAL GEOMETRY AND ITS APPLICATIONS
2014
A novel formulation of point vortex dynamics on the sphere : geometrical and numerical aspects
Joris Vankerschaver
Melvin Leok
A1
Journal Article
in
JOURNAL OF NONLINEAR SCIENCE
2014
Fluid-structure interaction in the Lagrange-Poincaré formalism : the Navier-Stokes and inviscid regimes
Henry Jacobs
Joris Vankerschaver
A1
Journal Article
in
JOURNAL OF GEOMETRIC MECHANICS
2014
2013
Generating functionals and Lagrangian partial differential equations
Joris Vankerschaver
Cuicui Liao
Melvin Leok
A1
Journal Article
in
JOURNAL OF MATHEMATICAL PHYSICS
2013
Nonholonomic LL systems on central extensions and the hydrodynamic Chaplygin sleigh with circulation
Luis C. García-Naranjo
Joris Vankerschaver
U
Journal Article
in
JOURNAL OF GEOMETRY AND PHYSICS
2013
Relative geodesics in the special Euclidean group
D. D. Holm
L. Noakes
Joris Vankerschaver
A1
Journal Article
in
PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
2013
The motion of the 2D hydrodynamic Chaplygin sleigh in the presence of circulation
Yuri N Fedorov
Luis C Garcia-Naranjo
Joris Vankerschaver
A1
Journal Article
in
DISCRETE AND CONTINUOUS DYNAMICAL SYSTEMS
2013
2012
The Hamilton-Pontryagin principle and multi-Dirac structures for classical field theories
Joris Vankerschaver
H Yoshimura
M Leok
A1
Journal Article
in
JOURNAL OF MATHEMATICAL PHYSICS
2012
2011
On the geometry of multi-Dirac structures and Gerstenhaber algebras
Joris Vankerschaver
Hiroaki Yoshimura
Melvin Leok
A1
Journal Article
in
JOURNAL OF GEOMETRY AND PHYSICS
2011
Routh reduction by stages
Bavo Langerock
Tom Mestdag
Joris Vankerschaver
A1
Journal Article
in
SYMMETRY INTEGRABILITY AND GEOMETRY-METHODS AND APPLICATIONS
2011
2010
Routhian reduction for quasi-invariant Lagrangians
Bavo Langerock
Frans Cantrijn
Joris Vankerschaver
A1
Journal Article
in
JOURNAL OF MATHEMATICAL PHYSICS
2010
Stokes-Dirac structures through reduction of infinite-dimensional Dirac structures
Joris Vankerschaver
Hiroaki Yoshimura
Melvin Leok
Jerrold E Marsden
P1
Conference
2010
The dynamics of a rigid body in potential flow with circulation
Joris Vankerschaver
E Kanso
JE Marsden
A1
Journal Article
in
REGULAR & CHAOTIC DYNAMICS
2010
2009
Geometric control of particle manipulation in a two-dimensional fluid
Yizhar Or
Joris Vankerschaver
Scott D Kelly
Richard M Murray
Jerrold E Marsden
C1
Conference
2009
The geometry and dynamics of interacting rigid bodies and point vortices
Joris Vankerschaver
Eva Kanso
Jerrold Marsden
A1
Journal Article
in
JOURNAL OF GEOMETRIC MECHANICS
2009
The motion of solid bodies in potential flow with circulation: a geometric outlook
Joris Vankerschaver
Eva Kanso
Jerrold E Marsden
P1
Conference
2009
Unambiguous formalism for higher order Lagrangian field theories
CM Campos
M de Leon
DM de Diego
Joris Vankerschaver
A1
Journal Article
in
JOURNAL OF PHYSICS A-MATHEMATICAL AND THEORETICAL
2009
2008
A connection-theoretic approach to the analysis of symmetries of nonholonomic field theories
Joris Vankerschaver
C1
Conference
2008
Symmetry aspects of nonholonomic field theories
Joris Vankerschaver
DM de Diego
A1
Journal Article
in
JOURNAL OF PHYSICS A-MATHEMATICAL AND THEORETICAL
2008
2007
A class of nonholonomic kinematic constraints in elasticity
Joris Vankerschaver
A1
Journal Article
in
JOURNAL OF PHYSICS A-MATHEMATICAL AND THEORETICAL
2007
Continuous and discrete aspects of Lagrangian field theories with nonholonomic constraints
Joris Vankerschaver
Frans Cantrijn
Dissertation
2007
Discrete Lagrangian field theories on Lie groupoids
Joris Vankerschaver
Frans Cantrijn
A1
Journal Article
in
JOURNAL OF GEOMETRY AND PHYSICS
2007
Euler-Poincare reduction for discrete field theories
Joris Vankerschaver
A1
Journal Article
in
JOURNAL OF MATHEMATICAL PHYSICS
2007
The Skinner-Rusk approach for vakonomic and nonholonomic field theories
Frans Cantrijn
Joris Vankerschaver
Bookchapter
in
Differential Geometric Methods in Mechanics and Field Theory
2007
2006
Classical field theories with external constraints
Joris Vankerschaver
C1
Conference
2006
2005
Geometric aspects of nonholonomic field theories
Joris Vankerschaver
Frans Cantrijn
M de Leon
DM de Diego
A1
Journal Article
in
REPORTS ON MATHEMATICAL PHYSICS
2005
The momentum map for nonholonomic field theories with symmetry
Joris Vankerschaver
A1
Journal Article
in
INTERNATIONAL JOURNAL OF GEOMETRIC METHODS IN MODERN PHYSICS
2005