Research Explorer

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Researcher

Jelle Van Leene

Publications & Research Data

Awards & Distinctions

58 Results

2026

Uncovering SnRK1 signalling pathways controlling starch degradation and transcriptional regulation in Arabidopsis thaliana

Toon MertensGeert De JaegerJelle Van Leene

2025

Development of SPARK biosensors & CRISPR screening approaches to study TOR/SnRK1 signaling in plants

Wouter SmaggheGeert De JaegerJelle Van Leene

LUMINIDEPENDENS orchestrates global transcriptional repression in Arabidopsis

Clara Bergis-SerQingyi WangXiaoning HeMaherun NisaVickie KaiserChristelle MazubertJeannine Drouin-WahbiRim Brik-ChaoucheLayla ChmaissJelle Van Leene et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The composition and structure of the outer kinetochore KMN complex is conserved across kingdoms

Dipesh Kumar SinghBirgit WalkemeierAnjali NayiniJelle Van LeeneStéphanie DurandGeert De JaegerRaphael GueroisRaphael Mercier

A1 Journal Article in COMMUNICATIONS BIOLOGY

2024

A dynamic ubiquitination balance of cell proliferation and endoreduplication regulators determines plant organ size

Ying ChenMattias VermeerschJelle Van LeeneGeert De JaegerYunhai LiHannes Vanhaeren

A1 Journal Article in SCIENCE ADVANCES

A nitrogen-specific interactome analysis sheds light on the role of the SnRK1 and TOR kinases in plant nitrogen signaling

Freya PersynWouter SmaggheDominique EeckhoutToon MertensThomas SmorscekNancy De WinneGeert PersiauEveline Van De SlijkeNathalie CrepinAstrid Gadeyne et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

Exploring the role of SnRK1 and its regulators in nitrogen signaling

Freya PersynGeert De JaegerJelle Van Leene

2023

Adaptor protein complex interaction map in Arabidopsis identifies P34 as a common stability regulator

Peng WangWei SiaoXiuyang ZhaoDeepanksha AroraRen WangDominique EeckhoutJelle Van LeeneRahul KumarAnaxi HoubaertNancy De Winne et al.

A1 Journal Article in NATURE PLANTS

ARSK1 activates TORC1 signaling to adjust growth to phosphate availability in Arabidopsis

Huikyong ChoMichael BanfZaigham ShahzadJelle Van LeeneFlavia BossiSandrine RuffelNadia BouainPengfei CaoGabiel KroukGeert De Jaeger et al.

A1 Journal Article in CURRENT BIOLOGY

Phase separation-based visualization of protein-protein interactions and kinase activities in plants (vol 35, pg 3280, 2023)

Alaeddine SafiWouter SmaggheAmanda GonçalvesQing WangKe XuAna Fernandez SalinaBenjamin CappeFranck RiquetEvelien MylleDominique Eeckhout et al.

Phase separation-based visualization of protein-protein interactions and kinase activities in plants

Alaeddine SafiWouter SmaggheAmanda GonçalvesQing WangKe XuAna Fernandez SalinaBenjamin CappeFranck RiquetEvelien MylleDominique Eeckhout et al.

A1 Journal Article in PLANT CELL

SnRK1 inhibits anthocyanin biosynthesis through both transcriptional regulation and direct phosphorylation and dissociation of the MYB/bHLH/TTG1 MBW complex

Ellen BrouckeThi Tuong Vi DangYi LiSander HulsmansJelle Van LeeneGeert De JaegerIldoo HwangWim Van den EndeFilip Rolland

A1 Journal Article in PLANT JOURNAL

The FANCC–FANCE–FANCF complex is evolutionarily conserved and regulates meiotic recombination

Dipesh Kumar SinghRigel Salinas GamboaAvinash Kumar SinghBirgit WalkemeierJelle Van LeeneGeert De JaegerImran SiddiqiRaphael GueroisWayne CrismaniRaphael Mercier

A1 Journal Article in NUCLEIC ACIDS RESEARCH

2022

Mapping of the plant SnRK1 kinase signalling network reveals a key regulatory role for the class II T6P synthase-like proteins

Jelle Van LeeneDominique EeckhoutAstrid GadeyneCaroline MatthijsChao HanNancy De WinneGeert PersiauEveline Van De SlijkeFreya PersynToon Mertens et al.

A1 Journal Article in NATURE PLANTS

Mapping the adaptor protein complex interaction network in Arabidopsis identifies P34 as a common stability regulator

Peng WangWei SiaoXiuyang ZhaoDeepanksha AroraRen WangDominique EeckhoutJelle Van LeeneRahul KumarAnaxi HoubaertNancy De Winne et al.

Phase separation to visualize protein interaction dynamics and post-translational modifications in planta

Alaeddine SafiWouter SmaggheAmanda GoncalvesBenjamin CappeFranck RiquetEvelyn MylleDaniël Van DammeDanny GeelenGeert De JaegerTom Beeckman et al.

Phase separation-based visualization of protein-protein interactions and kinase activities in plants

Alaeddine SafiWouter SmaggheAmanda GonçalvesKe XuAna Ibis FernandezBenjamin CappeFranck B. RiquetEvelien MylleDaniël Van DammeDanny Geelen et al.

2021

Distinct EH domains of the endocytic TPLATE complex confer lipid and protein binding

Klaas YpermanAnna PapageorgiouRomain MerceronSteven De MunckYehudi BlochDominique EeckhoutQihang JiangPieter TackRosa GrigoryanThomas Evangelidis et al.

A1 Journal Article in NATURE COMMUNICATIONS

2020

Development of AP-MS tools to explore the chromatin landscape and low affinity interactions in plants

Caroline MatthijsJelle Van LeeneGeert De Jaeger

Establishment of proximity-dependent biotinylation approaches in different plant model systems

Deepanksha AroraNikolaj B. AbelChen LiuPetra Van DammeKlaas YpermanDominique EeckhoutLam Dai VuJie WangAnna TornkvistFrancis Impens et al.

A1 Journal Article in PLANT CELL

2019

Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase

Jelle Van LeeneChao HanAstrid GadeyneDominique EeckhoutCaroline MatthijsBernard CannootNancy De WinneGeert PersiauEveline Van De SlijkeBrigitte Van De Cotte et al.

A1 Journal Article in NATURE PLANTS

Mutations of the AtYAK1 kinase suppress TOR deficiency in Arabidopsis

Céline ForzaniGustavo T DuarteJelle Van LeeneGilles ClémentStéphanie HuguetChristine Paysant-Le-RouxRaphaël MercierGeert De JaegerAnne-Sophie LeprinceChristian Meyer

A1 Journal Article in CELL REPORTS

The role of HEXOKINASE1 in Arabidopsis leaf growth

Judith Van DingenenMattias VermeerschLiesbeth De MildeSander HulsmansNancy De WinneJelle Van LeeneNathalie Gonzalez SanchezStijn DhondtGeert De JaegerFilip Rolland et al.

A1 Journal Article in PLANT MOLECULAR BIOLOGY

2018

GSyellow, a multifaceted tag for functional protein analysis in monocot and dicot plants

Nienke BesbruggeJelle Van LeeneDominique EeckhoutBernard CannootShubhada Rajabhau KulkarniNancy De WinneGeert PersiauEveline Van De SlijkeMichiel BontinckStijn Aesaert et al.

A1 Journal Article in PLANT PHYSIOLOGY

Hub protein controversy : taking a closer look at plant stress response hubs

Katy VandereykenJelle Van LeeneBarbara De ConinckBruno PA Cammue

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Recent trends in plant protein complex analysis in a developmental context

Michiel BontinckJelle Van LeeneAstrid GadeyneBert De RybelDominique EeckhoutHilde NelissenGeert De Jaeger

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

2017

The mitochondrial DNA-associated protein SWIB5 influences mtDNA architecture and homologous recombination

Jonas BlommeOlivier Van AkenJelle Van LeeneTeddy JéguRiet De RyckeMichiel De BruyneJasmien VercruysseJonah NolfTwiggy Van DaeleLiesbeth De Milde et al.

A1 Journal Article in PLANT CELL

2016

Functional characterization of the Arabidopsis transcription factor bZIP29 reveals its role in leaf and root development

Jelle Van LeeneJonas BlommeShubhada Rajabhau KulkarniBernard CannootNancy De WinneDominique EeckhoutGeert PersiauEveline Van De SlijkeLeen VercruysseRobin Vanden Bossche et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Glutaredoxin GRXS17 associates with the cytosolic iron-sulfur cluster assembly pathway

Sabrina IñigoAstrid Nagels DurandAndrés Ritter TraubSabine Le GallMartin TermatheRoland KlassenTakayuki TohgeBarbara De ConinckJelle Van LeeneRebecca De Clercq et al.

A1 Journal Article in PLANT PHYSIOLOGY

Isolation of protein complexes from the model legume Medicago truncatula by tandem affinity purification in hairy root cultures

Jonas GoossensNathan De GeyterAlan WaltonDominique EeckhoutJan MertensJacob PollierJennifer Liliana Fiallos JuradoAnnick De KeyserRebecca De ClercqJelle Van Leene et al.

A1 Journal Article in PLANT JOURNAL

The Arabidopsis iron-sulfur protein GRXS17 is a target of the ubiquitin E3 ligases RGLG3 and RGLG4

Astrid Nagels DurandSabrina IñigoAndrés Ritter TraubElisa IniestoRebecca De ClercqAn StaesJelle Van LeeneVicente RubioKris GevaertGeert De Jaeger et al.

A1 Journal Article in PLANT AND CELL PHYSIOLOGY

Transferring an optimized TAP-toolbox for the isolation of protein complexes to a portfolio of rice tissues

Maarten DedeckerJelle Van LeeneNancy De WinneDominique EeckhoutGeert PersiauEveline Van De SlijkeBernard CannootLeen VercruysseLies DumoulinNathalie Wojsznis et al.

A1 Journal Article in PLANT MOLECULAR BIOLOGY

2015

A repressor protein complex regulates leaf growth in Arabidopsis

Nathalie Gonzalez SanchezLaurens PauwelsAlexandra BaekelandtLiesbeth De MildeJelle Van LeeneNienke BesbruggeKen HeyndrickxAmparo Cuéllar PérezAstrid Nagels DurandRebecca De Clercq et al.

A1 Journal Article in PLANT CELL

An improved toolbox to unravel the plant cellular machinery by tandem affinity purification of Arabidopsis protein complexes

Jelle Van LeeneDominique EeckhoutBernard CannootNancy De WinneGeert PersiauEveline Van De SlijkeLeen VercruysseMaarten DedeckerAurine VerkestKlaas Vandepoele et al.

A1 Journal Article in NATURE PROTOCOLS

Dynamic changes in ANGUSTIFOLIA3 complex composition reveal a growth regulatory mechanism in the maize leaf

Hilde NelissenDominique EeckhoutKirin DemuynckGeert PersiauAlan WaltonMichiel Van BelMarieke VervoortJasper CandaeleJolien De BlockStijn Aesaert et al.

A1 Journal Article in PLANT CELL

Multiple mechanisms limit meiotic crossovers: TOP3 alpha and two BLM homologs antagonize crossovers in parallel to FANCM

Mathilde Séguéla-ArnaudWayne CrismaniCécile LarchevêqueJulien MazelNicole FrogerSandrine ChoinardAfef LemhemdiNicolas MacaisneJelle Van LeeneKris Gevaert et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The RING E3 ligase KEEP ON GOING modulates JASMONATE ZIM-DOMAIN12 stability

Laurens PauwelsAndrés Ritter TraubJonas GoossensAstrid Nagels DurandHongxia LiuYangnan GuJan GeerinckMarta BoterRobin Vanden BosscheRebecca De Clercq et al.

A1 Journal Article in PLANT PHYSIOLOGY

Unravelling plant molecular machineries through affinity purification coupled to mass spectrometry

Maarten DedeckerJelle Van LeeneGeert De Jaeger

A1 Journal Article in CURRENT OPINION IN PLANT BIOLOGY

2014

A generic tool for transcription factor target gene discovery in Arabidopsis cell suspension cultures based on tandem chromatin affinity purification

Aurine VerkestThomas AbeelKen HeyndrickxJelle Van LeeneChrista LanzEveline Van De SlijkeNancy De WinneDominique EeckhoutGeert PersiauFrank Van Breusegem et al.

A1 Journal Article in PLANT PHYSIOLOGY

ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development

Liesbeth VercruyssenAurine VerkestNathalie Gonzalez SanchezKen HeyndrickxDominique EeckhoutSoon-Ki HanTeddy JéguRafal ArchackiJelle Van LeeneMegan Andriankaja et al.

A1 Journal Article in PLANT CELL

bHLH003, bHLH013 and bHLH017 are new targets of JAZ repressors negatively regulating JA responses

Sandra FonsecaPatricia Fernández-CalvoGuillermo M FernándezMonica Díez-DíazSelena Gimenez-IbanezIrene López-VidrieroMarta GodoyGemma Fernández-BarberoJelle Van LeeneGeert De Jaeger et al.

A1 Journal Article in PLOS ONE

The cyclin-dependent kinase inhibitor KRP6 induces mitosis and impairs cytokinesis in giant cells induced by plant-parasitic nematodes in Arabidopsis

Paulo VieiraAnnelies De ClercqHilde StalsJelle Van LeeneEveline Van De SlijkeGert Van IsterdaelDominique EeckhoutGeert PersiauDaniël Van DammeAurine Verkest et al.

A1 Journal Article in PLANT CELL

The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants

Astrid GadeyneClara Sánchez-RodríguezSteffen VannesteSimone Di RubboHenrik ZauberKevin VannesteJelle Van LeeneNancy De WinneDominique EeckhoutGeert Persiau et al.

A1 Journal Article in CELL

2013

ERF115 controls root quiescent center cell division and stem cell replenishment

Jefri HeymanToon CoolsFilip VandenbusscheKen HeyndrickxJelle Van LeeneIlse VercauterenSandy VanderauweraKlaas VandepoeleGeert De JaegerDominique Van Der Straeten et al.

A1 Journal Article in SCIENCE

Plant protein interactomes

Pascal BraunSébastien AubourgJelle Van LeeneGeert De JaegerClaire Lurin

A1 Journal Article in Annual Review of Plant Biology

Retromer subunits VPS35A and VPS29 mediate prevacuolar compartment (PVC) function in Arabidopsis

Tomasz NodzyńskiIoan Mugurel FeraruSibylle HirschRiet De RyckeClaudiu NiculaesWout BoerjanJelle Van LeeneGeert De JaegerSteffen VannesteJiri Friml

A1 Journal Article in MOLECULAR PLANT

2012

SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization

Nubia Barbosa EloyNathalie Gonzalez SanchezJelle Van LeeneKatrien MaleuxHannes VanhaerenLiesbeth De MildeStijn DhondtLeen VercruysseErwin WittersRaphaël Mercier et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2011

A kaleidoscopic view of the Arabidopsis core cell cycle interactome

Jelle Van LeeneJoanna BorucGeert De JaegerEugenia RussinovaLieven De Veylder

A1 Journal Article in TRENDS IN PLANT SCIENCE

Isolation of transcription factor complexes from Arabidopsis cell suspension cultures by tandem affinity purification

Jelle Van LeeneDominique EeckhoutGeert PersiauEveline Van De SlijkeJan GeerinckGert Van IsterdaelErwin WittersGeert De Jaeger

Bookchapter in Plant transcription factors : methods and procotols

2010

Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana

Jelle Van LeeneJens HollunderDominique EeckhoutGeert PersiauEveline Van De SlijkeHilde StalsGert Van IsterdaelAurine VerkestSandy NeirynckYelle Buffel et al.

A1 Journal Article in MOLECULAR SYSTEMS BIOLOGY

2009

A bioanalytical method for the proteome wide display and analysis of protein complexes from whole plant cell lysates

Noor RemmerieLuc RoefEveline Van De SlijkeJelle Van LeeneGeert PersiauDominique EeckhoutHilde StalsKris LaukensFilip LemièreEddy Esmans et al.

A1 Journal Article in PROTEOMICS

CDKB1;1 forms a functional complex with CYCA2;3 to suppress endocycle onset

Véronique BoudolfTim LammensJoanna BorucJelle Van LeeneHilde Van Den DaeleSara MaesGert Van IsterdaelEugenia RussinovaEva KondorosiErwin Witters et al.

A1 Journal Article in Plant Physiology

Gene expression trends and protein features effectively complement each other in gene function prediction

Krzysztof WabnikTorgeir HvidstenAnna KedzierskaJelle Van LeeneGeert De JaegerGerrit BeemsterJan KomorowskiMartin Kuiper

A1 Journal Article in Bioinformatics

2008

Boosting tandem affinity purification of plant protein complexes

Jelle Van LeeneE WITTERSDirk InzéGeert De Jaeger

A1 Journal Article in TRENDS IN PLANT SCIENCE

Study of the cell cycle interactome of Arabidopsis thaliana through a targeted proteomics approach

Jelle Van LeeneGeert De JaegerDirk Inzé

2007

A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana

Jelle Van LeeneHilde StalsDominique EeckhoutGeert PersiauEveline Van De SlijkeGert Van IsterdaelAnnelies De ClercqEric BonnetKris LaukensNoor Remmerie et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

2005

Tandem affinity purification to study Cdk/cyclin complexes in Arabidopsis thaliana

Hilde StalsJelle Van LeeneE WittersH Van OnckelenDirk InzéGeert De Jaeger

2004

A technology platform for the fast production of monoclonal recombinant antibodies against plant proteins and peptides

Dominique EeckhoutAnnelies De ClercqEveline Van De SlijkeJelle Van LeeneHilde StalsPeter CasteelsGeert PersiauDominique VercammenFrank Van BreusegemMarc Zabeau et al.

A1 Journal Article in JOURNAL OF IMMUNOLOGICAL METHODS