Research Explorer

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Researcher

Jan Verwaeren

Publications & Research Data

Awards & Distinctions

76 Results

2025

A deep learning approach to perform defect classification of freeze-dried product

Quentin HervéNusret IpekJan VerwaerenThomas De Beer

A1 Journal Article in INTERNATIONAL JOURNAL OF PHARMACEUTICS

A knowledge-guided neural network approach to model tablet properties in direct compression

Manuel Borja Lopez PelaezJens DhondtJohny BertelsDaan Van HauwermeirenJan Verwaeren

A multitask modelling framework for tablet manufacturability and quality attributes in direct compression using knowledge-guided neural networks

Manuel Borja Lopez PelaezJens DhondtJohny BertelsDaan Van HauwermeirenJan Verwaeren

A1 Journal Article in INTERNATIONAL JOURNAL OF PHARMACEUTICS

Advanced wood species identification based on multiple anatomical sections and using deep feature transfer and fusion

Kallil M. ZielinskiLeonardo ScabiniLucas C. RibasNúbia R. da SilvaHans BeeckmanJan VerwaerenOdemir Martinez BrunoBernard De Baets

A1 Journal Article in COMPUTERS AND ELECTRONICS IN AGRICULTURE

AniDomNet : a sequential pairwise model for inferring dynamic animal dominance hierarchies

Nusret IpekFrank TuyttensBernard De BaetsJan Verwaeren

A1 Journal Article in METHODS IN ECOLOGY AND EVOLUTION

Consistent multi-animal pose estimation in cattle using dynamic Kalman filter based tracking

Maarten PerneelInes AdriaensBen AernoutsJan Verwaeren

A2 Journal Article in SMART AGRICULTURAL TECHNOLOGY

Digital model-driven cell & gene therapy process development

Evan ClaesTommy HeckRoger Dalmau-DiazMark DuerkopFilip DonvilAnais SchaschkowBritt Van BallaerJan VerwaerenJan Schrooten

A1 Journal Article in BIOTECHNOLOGY AND BIOENGINEERING

Dynamic multi-behaviour, orientation-invariant re-identification of Holstein-Friesian cattle

Maarten PerneelInes AdriaensJan VerwaerenBen Aernouts

A1 Journal Article in SENSORS

Evaluating the effect of anomalous images on computer vision-based wood identification models

Ruben De BlaereKévin LievensVictor DeklerckTom De MilWannes HubauHans BeeckmanJan VerwaerenJan Van den Bulcke

A1 Journal Article in WOOD SCIENCE AND TECHNOLOGY

Identification of Congolese wood species by use of anatomical images and artificial intelligence

Ruben De BlaereJan Van den BulckeHans BeeckmanJan VerwaerenWannes Hubau

Modelling the effect of base component properties and processing conditions on mixture products using probabilistic, knowledge-guided neural networks

Manuel Borja Lopez PelaezJens DhondtJohny BertelsDaan Van HauwermeirenJan Verwaeren

A1 Journal Article in INTERNATIONAL JOURNAL OF PHARMACEUTICS

Neural network approach to direct compression: integrating expert knowledge and data

Manuel Borja Lopez PelaezJens DhondtJohny BertelsDaan Van HauwermeirenJan Verwaeren

Towards smart water monitoring : IoT-driven LSTM modelling for multi-step-ahead forecasting of river salinity dynamics

Sait Mutlu KarahanWouter VandenbruwaeneJanelcy Alferes CastanoFrie Van BauwelMaarten Van LooJan Verwaeren

A1 Journal Article in JOURNAL OF ENVIRONMENTAL MANAGEMENT

2024

Automated particle inspection of continuously freeze-dried products using computer vision

Quentin HervéNusret IpekJan VerwaerenThomas De Beer

A1 Journal Article in INTERNATIONAL JOURNAL OF PHARMACEUTICS

Bayesian cell therapy process optimization

Evan ClaesTommy HeckKathleen CoddensMaarten SonnaertJan SchrootenJan Verwaeren

A1 Journal Article in BIOTECHNOLOGY AND BIOENGINEERING

Cage enrichment to minimize aggression in part-time group-housed female breeding rabbits

Liesbeth Van DammeNusret IpekJan VerwaerenEvelyne DelezieFrank Tuyttens

A1 Journal Article in FRONTIERS IN VETERINARY SCIENCE

Data-driven prediction of dairy cattle lifetime production and its use as a guideline to select surplus youngstock

Maarten PerneelStefaan De SmetJan Verwaeren

A1 Journal Article in JOURNAL OF DAIRY SCIENCE

Development of learning-based surrogate models for predicting the fluid dynamics in a pharmaceutical bioreactor

Umut KayaJan VerwaerenIngmar NopensNora Urbanetz

Modelling tablet quality attributes using probabilistic, knowledge-guided neural networks

Manuel Borja Lopez PelaezJens DhondtJohny Bertels [missing]Daan Van HauwermeirenJan Verwaeren

New way to analyze pyrolysis oils : applying image processing tools to unravel complex 1H-13C HSQC NMR spectra of bio-oil

Stef GhyselsJan VerwaerenHero Jan HeeresLeon RohrbachSimon BackxSven MangelinckxFrederik Ronsse

Towards good modelling practice for parallel hybrid models for wastewater treatment processes

Loes VerhaegheJan VerwaerenGamze KirimSaba DaneshgarPeter A. VanrolleghemElena Torfs

A1 Journal Article in WATER SCIENCE AND TECHNOLOGY

2023

Combining natural language processing and multidimensional classifiers to predict and correct CMMS metadata

Arne DelooseGlenn GyselsBernard De BaetsJan Verwaeren

A1 Journal Article in COMPUTERS IN INDUSTRY

Exploring image processing tools to unravel complex 1H-13C heteronuclear single-quantum correlation nuclear magnetic resonance spectra : a demonstration for pyrolysis liquids

Stef GhyselsJan VerwaerenHero Jan HeeresLéon RohrbachSimon BackxSven MangelinckxFrederik Ronsse

A1 Journal Article in ENERGY & FUELS

Quantifying agonistic interactions between group-housed animals to derive social hierarchies using computer vision : a case study with commercially group-housed rabbits

Nusret IpekLiesbeth Van DammeFrank TuyttensJan Verwaeren

A1 Journal Article in SCIENTIFIC REPORTS

Quantifying the hydrodynamic stress for bioprocesses

Umut KayaSrikanth GopireddyNora UrbanetzDiana KreitmayerEva GutheilIngmar NopensJan Verwaeren

A1 Journal Article in BIOTECHNOLOGY PROGRESS

SmartWoodID : an image collection of large end-grain surfaces to support wood identification systems

Ruben De BlaereKévin LievensDieter Van HasselVictor DeklerckTom De MilWannes HubauJoris Van AckerNils BourlandJan VerwaerenJan Van den Bulcke et al.

A1 Journal Article in DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

2022

Agonistic Rabbit Action Detection/Classification

Nusret IpekLiesbeth G. W. Van DammeFrank TuyttensJan Verwaeren

Behaviour monitoring of dairy youngstock using pose estimation in video

Maarten PerneelInes AdriaensJan VerwaerenBen Aernouts

Comparing a product-specific versus a general emoji list to measure consumers’ emotional associations with chocolate and predict food choice

Joachim SchoutetenJan VerwaerenListia RiniValérie Almli

A1 Journal Article in FOOD RESEARCH INTERNATIONAL

Improved wood species identification based on multi-view imagery of the three anatomical planes

Núbia Rosa da SilvaVictor DeklerckJan BaetensJan Van den BulckeMaaike De RidderMelissa RousseauOdemir Martinez BrunoHans BeeckmanJoris Van AckerBernard De Baets et al.

A1 Journal Article in PLANT METHODS

Improved wood species identification based on multi‑view imagery of the three anatomical planes

Núbia Rosa da SilvaV. DeklerckJan BaetensJan Van den BulckeMaaike De RidderM. RousseauOdemir Martinez BrunoHans BeeckmanJoris Van AckerBernard De Baets et al.

U Journal Article in Plant Methods

Innovative rhizosphere-based enrichment under P-limitation selects for bacterial isolates with high-performance P-solubilizing traits

Noémie De ZutterMaarten AmeyePieter VermeirJan VerwaerenLeen De GelderKris Audenaert

A1 Journal Article in MICROBIOLOGY SPECTRUM

Microstructure development in semi-liquid shortenings upon storage

Kato RondouFien De WitteTom RimauxWim DewinterJan VerwaerenKoen DewettinckFilip Van Bockstaele

Microstructure development in semi-liquid shortenings upon storage

Kato RondouFien De WitteTom RimauxWim DewinterJan VerwaerenKoen DewettinckFilip Van Bockstaele

Multiscale analysis of monoglyceride oleogels during storage

Kato RondouFien De WitteTom RimauxWim DewinterKoen DewettinckJan VerwaerenFilip Van Bockstaele

A1 Journal Article in JOURNAL OF THE AMERICAN OIL CHEMISTS SOCIETY

Predicting the hydrodynamic properties of a bioreactor : conditional density estimation as a surrogate model for CFD simulations

Umut KayaSrikanth GopireddyNora UrbanetzIngmar NopensJan Verwaeren

A1 Journal Article in CHEMICAL ENGINEERING RESEARCH & DESIGN

Probabilistic modelling of the hydrodynamic properties of a bioreactor for mAb production

Umut KayaSrikanth GopireddyNora UrbanetzIngmar NopensJan Verwaeren

Uncovering new insights and misconceptions on the effectiveness of phosphate solubilizing rhizobacteria in plants : a meta-analysis

Noémie De ZutterMaarten AmeyeBoris BekaertJan VerwaerenLeen De GelderKris Audenaert

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

2021

Shaping the rhizosphere : can in planta rhizobiome selection for phosphate solubilizing bacteria outperform classical in vitro selection methods?

Noémie De ZutterMaarten AmeyeJan VerwaerenLeen De GelderKris Audenaert

Shifts in the rhizobiome during consecutive in planta enrichment for phosphate-solubilizing bacteria differentially affect maize P status

Noémie De ZutterMaarten AmeyeJane DebodeCaroline De TenderSarah OmmeslagJan VerwaerenPieter VermeirKris AudenaertLeen De Gelder

A1 Journal Article in MICROBIAL BIOTECHNOLOGY

Usage of video monitoring and machine learning to monitor dairy cow behaviour

Maarten PerneelBen AernoutsInes AdriaensJan Verwaeren

2020

A combined RNA preservation and extraction protocol for gene expression studies in cacao beans

Jocelyn De WeverDieter TulkensJan VerwaerenHelena EveraertHayley RottiersKoen DewettinckSteve LefeverKathy Messens

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Automated multispectral imaging as a tool for the in planta selection of rhizosphere competent bacterial biostimulants

Noémie De ZutterMaarten AmeyeKris AudenaertJan VerwaerenLeen De Gelder

Comparison of the antifungal effect of undissociated lactic and acetic acid in sourdough bread and in chemically acidified wheat bread

Els DebonneFien Van SchoorsPeter MaeneFilip Van BockstaelePieter VermeirJan VerwaerenMia EeckhoutFrank Devlieghere

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Development of a land use regression model for black carbon using mobile monitoring data and its application to pollution-avoiding routing

Annelies Van den HoveJan VerwaerenJoris Van den BosscheJan TheunisBernard De Baets

A1 Journal Article in ENVIRONMENTAL RESEARCH

Respiratory CO2 combined with a blend of volatiles emitted by endophytic Serendipita strains strongly stimulate growth of Arabidopsis implicating auxin and cytokinin signaling

Jolien VennemanLore VandermeerschChristophe WalgraeveKris AudenaertMaarten AmeyeJan VerwaerenKathy SteppeHerman Van LangenhoveGeert HaesaertDanny Vereecke

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

2019

Comparing a standardized to a product-specific emoji list for evaluating food products by children

Joachim SchoutetenJan VerwaerenXavier GellynckValérie L Almli

A1 Journal Article in FOOD QUALITY AND PREFERENCE

In planta selection of rhizosphere competent biostimulant microorganisms through an automated plant phenomics platform

Noémie De ZutterJan VerwaerenKris AudenaertPieter VermeirMaarten AmeyeLeen De Gelder

Integrating expert and novice evaluations for augmenting ordinal regression models

Marc SaderJan VerwaerenRaul Perez FernandezBernard De Baets

A1 Journal Article in INFORMATION FUSION

Predicting children's food choice using check-all-that-apply questions

Jan VerwaerenXavier GellynckSofie LagastJoachim Schouteten

A1 Journal Article in JOURNAL OF SENSORY STUDIES

2018

Development and evaluation of land use regression models for black carbon based on bicycle and pedestrian measurements in the urban environment

Joris Van den BosscheBernard De BaetsJan VerwaerenDick BotteldoorenJan Theunis

A1 Journal Article in ENVIRONMENTAL MODELLING & SOFTWARE

Emoji as a tool for measuring children's emotions when tasting food

Joachim SchoutetenJan VerwaerenSofie LagastXavier GellynckHans De Steur

A1 Journal Article in FOOD QUALITY AND PREFERENCE

Green leaf volatile production by plants : a meta-analysis

Maarten AmeyeSilke AllmannJan VerwaerenGuy SmaggheGeert HaesaertRobert C SchuurinkKris Audenaert

A1 Journal Article in NEW PHYTOLOGIST

Species prevalence and disease progression studies demonstrate a seasonal shift in the Alternaria population composition on potato

Michiel VandecasteeleSofie LandschootJasper CarretteJan VerwaerenMonica HöfteKris AudenaertGeert Haesaert

A1 Journal Article in PLANT PATHOLOGY

The influence of natural oils of blackcurrant, black cumin seed, thyme and wheat germ on dough and bread technological and microbiological quality

Els DebonneIngrid De LeynJan VerwaerenStijn MoensFrank DevlieghereMia EeckhoutFilip Van Bockstaele

A1 Journal Article in LWT-FOOD SCIENCE AND TECHNOLOGY

2017

Congolese rhizospheric soils as a rich source of new plant growth-promoting endophytic Piriformospora isolates

Jolien VennemanKris AudenaertJan VerwaerenGeert BaertPascal BoeckxAdrien M MoangoBenoît D Dhed’aDanny VereeckeGeert Haesaert

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

The digitization of a food package’s life cycle : existing and emerging computer systems in the logistics and post-logistics phase

Mike VanderroostPeter RagaertJan VerwaerenBruno De MeulenaerBernard De BaetsFrank Devlieghere

A1 Journal Article in COMPUTERS IN INDUSTRY

The digitization of a food package’s life cycle : existing and emerging computer systems in the pre-logistics phase

Mike VanderroostPeter RagaertJan VerwaerenBruno De MeulenaerBernard De BaetsFrank Devlieghere

A1 Journal Article in COMPUTERS IN INDUSTRY

2015

A decoy-free approach to the identification of peptides

Giulia GonnelliMichiel StockJan VerwaerenDavy MaddeleinBernard De BaetsLennart MartensSven Degroeve

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

A search grid for parameter optimization as a byproduct of model sensitivity analysis

Jan VerwaerenPieter Van der WeeënBernard De Baets

A1 Journal Article in APPLIED MATHEMATICS AND COMPUTATION

Accounting for image uncertainty in SAR-based flood mapping

Laura GiustariniHilde VernieuweJan VerwaerenMarco ChiniRenaud HostachePatrick MatgenNiko VerhoestBernard De Baets

A1 Journal Article in INTERNATIONAL JOURNAL OF APPLIED EARTH OBSERVATION AND GEOINFORMATION

An interval estimator for the unmixing of mixtures with set-based source descriptions

Jan VerwaerenMichaël RademakerBernard De Baets

A1 Journal Article in INTERNATIONAL JOURNAL OF APPROXIMATE REASONING

Milk fatty acids as possible biomarkers to diagnose hyperketonemia in early lactation

Sasitorn JorjongATM van KnegselJan VerwaerenRM BruckmaierBernard De BaetsB KempVeerle Fievez

A1 Journal Article in JOURNAL OF DAIRY SCIENCE

Mobile monitoring for mapping spatial variation in urban air quality: development and validation of a methodology based on an extensive dataset

Joris Van den BosscheJan PetersJan VerwaerenDick BotteldoorenJan TheunisBernard De Baets

A1 Journal Article in ATMOSPHERIC ENVIRONMENT

Predicting consumer acceptance of packaged meat using L1-regularized ordinal regression

Marc SaderJan VerwaerenAngelos-Gerasimos IoannidisMike VanderroostFrank DevlieghereBernard De Baets

A2 Journal Article in COMMUNICATIONS IN AGRICULTURAL AND APPLIED BIOLOGICAL SCIENCES

2014

Mathematical optimization methods for the analysis of compositional data: subset selection, unmixing and prediction

Jan VerwaerenBernard De Baets

Milk fatty acids as possible biomarkers to early diagnose elevated concentrations of blood plasma nonesterified fatty acids in dairy cows

Sasitorn JorjongATM van KnegselJan VerwaerenM Val LahozRM BruckmaierBernard De BaetsB KempVeerle Fievez

A1 Journal Article in JOURNAL OF DAIRY SCIENCE

2013

Countering the negative search bias of Ant Colony Optimization in subset selection problems

Jan VerwaerenKarolien ScheerlinckBernard De Baets

A1 Journal Article in COMPUTERS & OPERATIONS RESEARCH

Habitat prediction and knowledge extraction for spawning European grayling (Thymallus thymallus L.) using a broad range of species distribution models

Shinji FukudaBernard De BaetsWillem WaegemanJan VerwaerenAns Mouton

A1 Journal Article in ENVIRONMENTAL MODELLING & SOFTWARE

2012

Learning partial ordinal class memberships with kernel-based proportional odds models

Jan VerwaerenWillem WaegemanBernard De Baets

A1 Journal Article in COMPUTATIONAL STATISTICS & DATA ANALYSIS

Modeling the photocatalytic degradation of moxifloxacin by means of a stochastic cellular automaton

Pieter Van der WeeënJan BaetensJan VerwaerenXander Van DoorslaerPhilippe HeynderickxJo DewulfBernard De Baets

A1 Journal Article in CHEMICAL ENGINEERING JOURNAL

2011

Incorporating prior knowledge in multiple output regression with application to chemometrics

Jan VerwaerenWillem WaegemanBernard De Baets

Supervised learning algorithms for multi-class classification problems with partial class memberships

Willem WaegemanJan VerwaerenBram SlabbinckBernard De Baets

A1 Journal Article in FUZZY SETS AND SYSTEMS

2010

Ensemble methods for multi-label learning of compositional data

Jan VerwaerenWillem WaegemanBernard De Baets

Learning partial ordinal class memberships in a proportional odds setting

Jan VerwaerenWillem WaegemanBernard De Baets

2009

Learning ordinal partial class memberships with kernel-based proportional odds models

Willem WaegemanJan VerwaerenBernard De Baets