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Researcher
Ive De Smet
Profile
Projects
Publications
Activities
Awards & Distinctions
168
Results
2025
Integrative approaches to enhance reproductive resilience of crops for climate-proof agriculture
Collins Agho
Adi Avni
Ariola Bacu
Ayat Bakery
Salma Balazadeh
Faheem Shehzad Baloch
Christos Bazakos
Nataša Čereković
Palak Chaturvedi
Harsh Chauhan
et al.
A2
Journal Article
in
PLANT STRESS
2025
Large-scale comparative wheat phosphoproteome profiling reveals temperature-associated molecular signatures in wheat
Cássio Flávio Fonseca de Lima
Tingting Zhu
Lisa Van den Broeck
Brigitte Van De Cotte
Anna M Locke
Rosangela Sozzani
Ive De Smet
U
Journal Article
in
Plant Physiology
2025
Stomatal opening under high temperatures is controlled by the OST1-regulated TOT3–AHA1 module
Xiangyu Xu
Hongyan Liu
Myrthe Praat
Gaston A. Pizzio
Zhang Jiang
Steven Michiel Driever
Ren Wang
Brigitte Van De Cotte
Selwyn Villers
Kris Gevaert
et al.
A1
Journal Article
in
NATURE PLANTS
2025
2024
Heterodimerization domains in MAP4 KINASEs determine subcellular localization and activity in Arabidopsis
Lixia Pan
Cássio Flávio Fonseca de Lima
Lam Dai Vu
Brigitte Van De Cotte
Nancy De Winne
Kris Gevaert
Geert De Jaeger
Ive De Smet
A1
Journal Article
in
PLANT PHYSIOLOGY
2024
High temperature effects on root system architecture
Marcel Quint
Rahul Bhosale
Ive De Smet
Bookchapter
in
Plant roots : the hidden half
2024
Phosphoproteome analyses pinpoint the F‐box protein SLOW MOTION as a regulator of warm temperature‐mediated hypocotyl growth in Arabidopsis
Shanshuo Zhu
Lixia Pan
Lam Dai Vu
Xiangyu Xu
Beatriz Orosa‐Puente
Tingting Zhu
Pia Neyt
Brigitte Van De Cotte
Thomas B. Jacobs
Joshua M. Gendron
et al.
A1
Journal Article
in
NEW PHYTOLOGIST
2024
Phosphorylation and ubiquitination-mediated signalling in Arabidopsis root and hypocotyl growth
Lixia Pan
Ive De Smet
Dissertation
2024
Temperature-driven phosphoproteome changes in plants
Cássio Flávio Fonseca de Lima
Ive De Smet
Dissertation
2024
The Plant PTM Viewer 2.0 : in-depth exploration of plant protein modification landscapes
Patrick Willems
Lieven Sterck
Avilien Dard
Jingjing Huang
Ive De Smet
Kris Gevaert
Frank Van Breusegem
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2024
2023
25 Years of thermomorphogenesis research : milestones and perspectives
Marcel Quint
Carolin Delker
Sureshkumar Balasubramanian
Martin Balcerowicz
Jorge J. Casal
Christian Danve M. Castroverde
Meng Chen
Xuemei Chen
Ive De Smet
Christian Fankhauser
et al.
Editorial material
2023
Dynamic GOLVEN-ROOT GROWTH FACTOR 1 INSENSITIVE signaling in the root cap mediates root gravitropism
Ke Xu
Joris Jourquin
Xiangyu Xu
Ive De Smet
Ana Fernandez Salina
Tom Beeckman
A1
Journal Article
in
PLANT PHYSIOLOGY
2023
Editorial : #ArtGenetics - looking at art to trace plant evolution
Ive De Smet
David Vergauwen
Editorial material
2023
Editorial : Proteomics of plant development and hormonal responses, volume II
Alexandra M.E. Jones
Ive De Smet
Editorial material
2023
Functional annotation of proteins for signaling network inference in non-model species
Lisa Van den Broeck
Dinesh Kiran Bhosale
Kuncheng Song
Cássio Flávio Fonseca de Lima
Michael Ashley
Tingting Zhu
Shanshuo Zhu
Brigitte Van De Cotte
Pia Neyt
Anna C. Ortiz
et al.
A1
Journal Article
in
NATURE COMMUNICATIONS
2023
It is time to move : heat-induced translocation events
Tingting Zhu
Shao-Li Yang
Ive De Smet
A1
Journal Article
in
CURRENT OPINION IN PLANT BIOLOGY
2023
Let's go bananas with paintings
Norbert G.J. Peeters
David Vergauwen
Ive De Smet
Editorial material
2023
Optimal brain dissection in dense autoencoders : towards determining feature importance in -omics data
Fin Amin
Lisa Van den Broeck
Ive De Smet
Anna M. Locke
Rossangela Sozzani
C1
Conference
2023
Paternally imprinted LATE‐FLOWERING2 transcription factor contributes to paternal‐excess interploidy hybridization barriers in wheat
Guanghui Yang
Man Feng
Kuohai Yu
Guangxian Cui
Yan Zhou
Lv Sun
Lulu Gao
Yumei Zhang
Huiru Peng
Yingyin Yao
et al.
A1
Journal Article
in
JOURNAL OF INTEGRATIVE PLANT BIOLOGY
2023
Phosphorylation integrates signalling under drought and high temperatures in plants
Xiangyu Xu
Ive De Smet
Dissertation
2023
Phosphorylation of ADAPTOR PROTEIN-2 μ-adaptin by ADAPTOR-ASSOCIATED KINASE1 regulates the tropic growth of Arabidopsis roots
Wei Siao
Peng Wang
Xiuyang Zhao
Lam Dai Vu
Ive De Smet
Eugenia Russinova
A1
Journal Article
in
PLANT CELL
2023
PlantACT! : how to tackle the climate crisis
Heribert Hirt
Salim Al-Babili
Marilia Almeida-Trapp
Martin Antoine
Manuel Aranda
Dorothea Bartels
Malcolm Bennett
Ikram Blilou
Damian Boer
Alix Boulouis
et al.
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2023
TPLATE complex‐dependent endocytosis attenuates CLAVATA1 signaling for shoot apical meristem maintenance
Jie Wang
Qihang Jiang
Roman Pleskot
Peter Grones
Elmehdi Bahafid
Grégoire Denay
Carlos Galván‐Ampudia
Xiangyu Xu
Michaël Vandorpe
Evelien Mylle
et al.
A1
Journal Article
in
EMBO REPORTS
2023
Targeted profiling of protein phosphorylation in plants
Xiangyu Xu
Kris Gevaert
Ive De Smet
Lam Dai Vu
Bookchapter
in
Mass spectrometry-based proteomics
2023
The CIPK23 protein kinase represses SLAC1‐type anion channels in Arabidopsis guard cells and stimulates stomatal opening
Shouguang Huang
Tobias Maierhofer
Kenji Hashimoto
Xiangyu Xu
Sohail M. Karimi
Heike Müller
Michael A. Geringer
Yi Wang
Jörg Kudla
Ive De Smet
et al.
A1
Journal Article
in
NEW PHYTOLOGIST
2023
When drought meets heat : a plant omics perspective
Xiangyu Xu
Cássio Flávio Fonseca de Lima
Lam Dai Vu
Ive De Smet
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2023
2022
Auxin analog-induced Ca 2+ signaling is not involved in inhibition of endosomal aggregation in Arabidopsis roots
Ren Wang
Ellie Himschoot
Matteo Grenzi
Jian Chen
Alaeddine Safi
Melanie Krebs
Karin Schumacher
Moritz Nowack
Wolfgang Moeder
Keiko Yoshioka
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2022
Auxin-responsive (phospho)proteome analysis reveals key biological processes and signaling associated with shoot-borne crown root development in rice
Harshita Singh
Zeenu Singh
Tingting Zhu
Xiangyu Xu
Bhairavnath Waghmode
Tushar Garg
Shivani Yadav
Debabrata Sircar
Ive De Smet
Shri Ram Yadav
A1
Journal Article
in
PLANT AND CELL PHYSIOLOGY
2022
Field-grown soybean shows genotypic variation in physiological and seed composition responses to heat stress during seed development
Anna C. Ortiz
Ive De Smet
Rosangela Sozzani
Anna M. Locke
A1
Journal Article
in
ENVIRONMENTAL AND EXPERIMENTAL BOTANY
2022
Histidine kinase inhibitors impair shoot regeneration in Arabidopsis thaliana via cytokinin signaling and SAM patterning determinants
Robin Lardon
Hoang Khai Trinh
Xiangyu Xu
Lam Dai Vu
Brigitte Van De Cotte
Markéta Pernisová
Steffen Vanneste
Ive De Smet
Danny Geelen
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2022
Phosphorylation-mediated high temperature signalling in plants
Tingting Zhu
Ive De Smet
Dissertation
2022
Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling
Qing Lu
Yonghong Zhang
Joakim Hellner
Caterina Giannini
Xiangyu Xu
Jarne Pauwels
Qian Ma
Wim Dejonghe
Huibin Han
Brigitte Van De Cotte
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2022
ROPGAP-dependent interaction between brassinosteroid and ROP2-GTPase signaling controls pavement cell shape in Arabidopsis
Cheng Zhang
Theresa Lauster
Wenxin Tang
Anaxi Houbaert
Shanshuo Zhu
Dominique Eeckhout
Ive De Smet
Geert De Jaeger
Thomas B. Jacobs
Tongda Xu
et al.
A1
Journal Article
in
CURRENT BIOLOGY
2022
Small secreted peptides encoded on the wheat (Triticum aestivum L.) genome and their potential roles in stress responses
Dongdong Tian
Qi Xie
Zhichao Deng
Jin Xue
Wei Li
Zenglin Zhang
Yifei Dai
Bo Zheng
Tiegang Lu
Ive De Smet
et al.
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2022
Stress granule‐associated TaMBF1c confers thermotolerance through regulating specific mRNA translation in wheat ( Triticum aestivum )
Xuejun Tian
Zhen Qin
Yue Zhao
Jingjing Wen
Tianyu Lan
Liyuan Zhang
Fei Wang
Dandan Qin
Kuohai Yu
Aiju Zhao
et al.
A1
Journal Article
in
NEW PHYTOLOGIST
2022
Wandering between hot and cold : temperature dose-dependent responses
Tingting Zhu
Martijn van Zanten
Ive De Smet
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2022
2021
A comprehensive phylogenetic analysis of the MAP4K family in the green lineage
Lixia Pan
Cássio Flávio Fonseca de Lima
Lam Dai Vu
Ive De Smet
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2021
Getting to the root of belowground high temperature responses in plants
Cássio Flávio Fonseca de Lima
Jürgen Kleine-Vehn
Ive De Smet
Elena Feraru
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2021
Local regulation of auxin transport in root-apex transition zone mediates aluminium-induced Arabidopsis root-growth inhibition
Cuiling Li
Guangchao Liu
Xiaoyu Geng
Chunmei He
Taiyong Quan
Ken‐ichiro Hayashi
Ive De Smet
Hélène S. Robert
Zhaojun Ding
Zhong‐Bao Yang
A1
Journal Article
in
PLANT JOURNAL
2021
Multiple cellular compartments engagement in Nicotiana benthamiana-peanut stunt virus-satRNA interactions revealed by systems biology approach
Barbara Wrzesińska
Agnieszka Zmienko
Lam Dai Vu
Ive De Smet
Aleksandra Obrępalska-Stęplowska
A1
Journal Article
in
PLANT CELL REPORTS
2021
Pharmacological and genetic manipulations of Ca2+ signaling have contrasting effects on auxin-regulated trafficking
Ren Wang
Ellie Himschoot
Matteo Grenzi
Jian Chen
Melanie Krebs
Karin Schumacher
Moritz Nowack
Daniël Van Damme
Ive De Smet
Tom Beeckman
et al.
Preprint
2021
Protein kinase and phosphatase control of plant temperature responses
Myrthe Praat
Ive De Smet
Martijn van Zanten
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2021
The Arabidopsis root tip (phospho)proteomes at growth-promoting versus growth-repressing conditions reveal novel root growth regulators
Natalia Nikonorova
Evan Murphy
Cássio Flávio Fonseca de Lima
Shanshuo Zhu
Brigitte Van De Cotte
Lam Dai Vu
Daria Balcerowicz
Lanxin Li
Xiangpei Kong
Gieljan De Rop
et al.
A1
Journal Article
in
CELLS
2021
The collaboration between art history and genetics : an unlikely marriage of disciplines
Ive De Smet
David Vergauwen
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2021
The heat is on : how crop growth, development, and yield respond to high temperature
Tingting Zhu
Cássio Flávio Fonseca de Lima
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2021
The membrane-localized protein kinase MAP4K4/TOT3 regulates thermomorphogenesis
Lam Dai Vu
Xiangyu Xu
Tingting Zhu
Lixia Pan
Martijn van Zantem
Dorrit de Jong
Yaowei Wang
Tim Vanremoortele
Anna M. Locke
Brigitte Van De Cotte
et al.
A1
Journal Article
in
NATURE COMMUNICATIONS
2021
Unraveling the MAX2 protein network in Arabidopsis thaliana : identification of the protein phosphatase PAPP5 as a novel MAX2 interactor
Sylwia Magdalena Struk
Carolien De Cuyper
Anse Jacobs
Lukas Braem
Alan Walton
Annick De Keyser
Stephen Depuydt
Lam Dai Vu
Ive De Smet
François-Didier Boyer
et al.
A1
Journal Article
in
MOLECULAR & CELLULAR PROTEOMICS
2021
Warm temperature triggers JOX and ST2A-mediated jasmonate catabolism to promote plant growth
Tingting Zhu
Cornelia Herrfurth
Mingming Xin
Tatyana Savchenko
Ivo Feussner
Alain Goossens
Ive De Smet
A1
Journal Article
in
NATURE COMMUNICATIONS
2021
2020
Expanding the mitogen-activated protein kinase (MAPK) universe : an update on MAP4Ks
Lixia Pan
Ive De Smet
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2020
Genomes on canvas : artist’s perspective on evolution of plant-based foods
David Vergauwen
Ive De Smet
Editorial material
2020
Non‐canonical AUX/IAA protein IAA33 competes with canonical AUX/IAA repressor IAA5 to negatively regulate auxin signaling
Bingsheng Lv
Qianqian Yu
Jiajia Liu
Xuejing Wen
Zhenwei Yan
Kongqin Hu
Hanbing Li
Xiangpei Kong
Cuiling Li
Huiyu Tian
et al.
A1
Journal Article
in
EMBO JOURNAL
2020
Regulation of protein abundance by internal and external stimuli in Arabidopsis
Shanshuo Zhu
Ive De Smet
Kris Gevaert
Dissertation
2020
The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis
Stephanie Smith
Shanshuo Zhu
Lisa Joos
Ianto Roberts
Natalia Nikonorova
Lam Dai Vu
Elisabeth Stes
Hyunwoo Cho
Antoine Larrieu
Wei Xuan
et al.
A1
Journal Article
in
MOLECULAR & CELLULAR PROTEOMICS
2020
The cyclin CYCA3;4 is a postprophase target of the APC/CCCS52A2 E3-ligase controlling formative cell divisions in Arabidopsis
Alex Willems
Jefri Heyman
Thomas Eekhout
Ignacio Achón
José Antonio Pedroza-Garcia
Tingting Zhu
Lei Li
Ilse Vercauteren
Hilde Van Den Daele
Brigitte Van De Cotte
et al.
A1
Journal Article
in
PLANT CELL
2020
2019
Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase
Jelle Van Leene
Chao Han
Astrid Gadeyne
Dominique Eeckhout
Caroline Matthijs
Bernard Cannoot
Nancy De Winne
Geert Persiau
Eveline Van De Slijke
Brigitte Van De Cotte
et al.
A1
Journal Article
in
NATURE PLANTS
2019
Developmental plasticity at high temperature
Lam Dai Vu
Xiangyu Xu
Kris Gevaert
Ive De Smet
A1
Journal Article
in
PLANT PHYSIOLOGY
2019
Developmental programming of thermonastic leaf movement
Young-Joon Park
Hyo-Jun Lee
Kyung-Eun Gil
Jae Young Kim
June-Hee Lee
Hyodong Lee
Hyung-Taeg Cho
Lam Dai Vu
Ive De Smet
Chung-Mo Park
A1
Journal Article
in
PLANT PHYSIOLOGY
2019
EXPANSIN A1-mediated radial swelling of pericycle cells positions anticlinal cell divisions during lateral root initiation
Priya Ramakrishna
Paola Ruiz Duarte
Graham A Rance
Martin Schubert
Vera Vordermaier
Lam Dai Vu
Evan Murphy
Amaya Vilches Barro
Kamal Swarup
Kamaljit Moirangthem
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2019
Feeling the heat : searching for plant thermosensors
Lam Dai Vu
Kris Gevaert
Ive De Smet
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2019
Look closely, the beautiful may be small : precursor-derived peptides in plants
Vilde Olsson
Lisa Joos
Shanshuo Zhu
Kris Gevaert
Melinka A Butenko
Ive De Smet
A1
Journal Article
in
Annual Review of Plant Biology
2019
Phosphorylation mediates high temperature signalling in plants
Lam Dai Vu
Ive De Smet
Kris Gevaert
Dissertation
2019
Phosphorylation-mediated growth regulation in Arabidopsis
Natalia Nikonorova
Ive De Smet
Geert De Jaeger
Dissertation
2019
Phosphorylation-mediated signalling in plants
Xiangyu Xu
Tingting Zhu
Natalia Nikonorova
Ive De Smet
A2
Journal Article
in
ANNUAL PLANT REVIEWS ONLINE
2019
The Plant PTM Viewer, a central resource for exploring plant protein modifications
Patrick Willems
Alison Horne
Thomas Van Parys
Sofie Goormachtig
Ive De Smet
Alexander Botzki
Frank Van Breusegem
Kris Gevaert
A1
Journal Article
in
PLANT JOURNAL
2019
The strawberry tales : size matters
David Vergauwen
Ive De Smet
Editorial material
2019
Watermelons versus Melons: A Matter of Taste
David Vergauwen
Ive De Smet
Editorial material
2019
2018
Arabidopsis research requires a critical re-evaluation of genetic tools
Natalia Nikonorova
Kun Yue
Tom Beeckman
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2018
Early mannitol-triggered changes in the Arabidopsis leaf (phospho) proteome reveal growth regulators
Natalia Nikonorova
Lisa Van den Broeck
Shanshuo Zhu
Brigitte Van De Cotte
Marieke Dubois
Kris Gevaert
Dirk Inzé
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2018
Peanut stunt virus and its satellite RNA trigger changes in phosphorylation in N-benthamiana infected plants at the early stage of the infection
Barbara Wrzesinska
Lam Dai Vu
Kris Gevaert
Ive De Smet
Aleksandra Obrepalska-Steplowska
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2018
Protein language : post-translational modifications talking to each other
Lam Dai Vu
Kris Gevaert
Ive De Smet
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2018
Proteome analysis of Arabidopsis roots
Natalia Nikonorova
Lam Dai Vu
Elisabeth Stes
Kris Gevaert
Ive De Smet
Bookchapter
in
Root development : methods and protocols
2018
Receptor kinase THESEUS1 is a rapid alkalinization factor 34 receptor in Arabidopsis
Martine Gonneau
Thierry Desprez
Marjolaine Martin
Veronica G Doblas
Laura Bacete
Fabien Miart
Rodnay Sormani
Kian Hematy
Julien Renou
Benoit Landrein
et al.
A1
Journal Article
in
CURRENT BIOLOGY
2018
Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms
Lam Dai Vu
Tingting Zhu
Inge Verstraeten
Brigitte Van De Cotte
Kris Gevaert
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2018
The auxin-regulated CrRLK1L kinase ERULUS controls cell wall composition during root hair tip growth
Sébastjen Schoenaers
Daria Balcerowicz
Gordon Breen
Kristine Hill
Malgorzata Zdanio
Gregory Mouille
Tara J Holman
Jaesung Oh
Michael H Wilson
Natalia Nikonorova
et al.
A1
Journal Article
in
CURRENT BIOLOGY
2018
The xerobranching response represses lateral root formation when roots are not in contact with water
Beata Orman-Ligeza
Emily C Morris
Boris Parizot
Tristan Lavigne
Aurelie Babé
Aleksander Ligeza
Stephanie Klein
Craig Sturrock
Wei Xuan
Ondřey Novák
et al.
A1
Journal Article
in
CURRENT BIOLOGY
2018
2017
From early farmers to Norman Borlaug : the making of modern wheat
David Vergauwen
Ive De Smet
Editorial material
2017
Primary root
Inge Verstraeten
Ive De Smet
Bookchapter
in
eLS
2017
Proteome profiling of wheat shoots from different cultivars
Lam Dai Vu
Inge Verstraeten
Elisabeth Stes
Michiel Van Bel
Frederik Coppens
Kris Gevaert
Ive De Smet
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2017
Synergistic action of auxin and cytokinin mediates aluminum-induced root growth inhibition in Arabidopsis
Zhong-Bao Yang
Guangchao Liu
Jiajia Liu
Bing Zhang
Wenjing Meng
Bruno Muller
Ken-ichiro Hayashi
Xiansheng Zhang
Zhong Zhao
Ive De Smet
et al.
A1
Journal Article
in
EMBO REPORTS
2017
Tips and tricks for exogenous application of synthetic post-translationally modified peptides to plants
Nathan Czyzewicz
Elisabeth Stes
Ive De Smet
Bookchapter
in
Plant hormones : methods and protocols
2017
Transcriptional integration of paternal and maternal factors in the Arabidopsis zygote
Minako Ueda
Ernst Aichinger
Wen Gong
Edwin Groot
Inge Verstraeten
Lam Dai Vu
Ive De Smet
Tetsuya Higashiyama
Masaaki Umeda
Thomas Laux
A1
Journal Article
in
GENES & DEVELOPMENT
2017
2016
CEP5 and XIP1/CEPR1 regulate lateral root initiation in Arabidopsis
Ianto Roberts
Stephanie Smith
Elisabeth Stes
Bert De Rybel
An Staes
Brigitte Van De Cotte
Maria Njo
Lise Dedeyne
Hans Demol
Julien Lavenus
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2016
Cellular dynamics of the primary shoot and root meristem
Lam Dai Vu
Ive De Smet
Bookchapter
in
Molecular cell biology of the growth and differentiation of plant cells
2016
Down the rabbit hole-carrots, genetics and art
David Vergauwen
Ive De Smet
Editorial material
2016
Fine-tuning development through antagonistic peptides : an emerging theme
Jin Suk Lee
Ive De Smet
Editorial material
2016
Identification of molecular components affecting root architecture
Ianto Roberts
Tom Beeckman
Ive De Smet
Dissertation
2016
It's time for some 'site'-seeing: novel tools to monitor the ubiquitin landscape in Arabidopsis thaliana
Alan Walton
Elisabeth Stes
Nicolas Cybulski
Michiel Van Bel
Sabrina Iñigo
Astrid Nagels Durand
Evy Timmerman
Jefri Heyman
Laurens Pauwels
Lieven De Veylder
et al.
A1
Journal Article
in
PLANT CELL
2016
PP2A-3 interacts with ACR4 and regulates formative cell division in the Arabidopsis root
Kun Yue
Priyanka Sandal
Elisabeth L. Williams
Evan Murphy
Elisabeth Stes
Natalia Nikonorova
Priya Ramakrishna
Nathan Czyzewicz
Laura Montero Morales
Robert Kumpf
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2016
Plant peptides: taking them to the next level
Barbara De Coninck
Ive De Smet
Editorial material
2016
RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation
Evan Murphy
Lam Dai Vu
Lisa Van den Broeck
Zhefeng Lin
Priya Ramakrishna
Brigitte Van De Cotte
Allison Gaudinier
Tatsuaki Goh
Daniel Slane
Tom Beeckman
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2016
The Arabidopsis thaliana CLAVATA3/EMBRYO-SURROUNDING REGION 26 (CLE26) peptide is able to alter root architecture of Solanum lycopersicum and Brassica napus
Nathan Czyzewicz
Ive De Smet
A1
Journal Article
in
PLANT SIGNALING & BEHAVIOR
2016
The growing story of (ARABIDOPSIS) CRINKLY 4
Nathan Czyzewicz
Natalia Nikonorova
Matthew R Meyer
Priyanka Sandal
Shweta Shah
Lam Dai Vu
Kris Gevaert
A Gururaj Rao
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2016
Up-to-date workflow for plant (phospho)proteomics identifies differential drought-responsive phosphorylation events in maize leaves
Lam Dai Vu
Elisabeth Stes
Michiel Van Bel
Hilde Nelissen
Davy Maddelein
Dirk Inzé
Frederik Coppens
Lennart Martens
Kris Gevaert
Ive De Smet
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2016
2015
A phylogenetic approach to study the origin and evolution of the CRINKLY4 family
Natalia Nikonorova
Lam Dai Vu
Nathan Czyzewicz
Kris Gevaert
Ive De Smet
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2015
Antagonistic peptide technology for functional dissection of CLE peptides revisited
Nathan Czyzewicz
Mari Wildhagen
Pietro Cattaneo
Yvonne Stahl
Karine Gustavo Pinto
Reidunn B Aalen
Melinka A Butenko
Rüdiger Simon
Christian S Hardtke
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2015
Identification of interactors and downstream signaling of ACR4 controlling stem cell formative division in the Arabidopsis root
Kun Yue
Tom Beeckman
Ive De Smet
Dissertation
2015
Modulation of Arabidopsis and monocot root architecture by CLAVATA3/EMBRYO SURROUNDING REGION 26 peptide
Nathan Czyzewicz
Chun-Lin Shi
Lam Dai Vu
Brigitte Van De Cotte
Charlie Hodgman
Melinka A Butenko
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2015
Phosphoproteomics-based peptide ligand-receptor kinase pairing: commentary on: 'A peptide hormone and its receptor protein kinase regulate plant cell expansion'
Elisabeth Stes
Kris Gevaert
Ive De Smet
Editorial material
2015
Plant hormone signalling through the eye of the mass spectrometer
Alan Walton
Elisabeth Stes
Ive De Smet
Sofie Goormachtig
Kris Gevaert
A1
Journal Article
in
PROTEOMICS
2015
The plant peptidome : an expanding repertoire of structural features and biological functions
Patrizia Tavormina
Barbara De Coninck
Natalia Nikonorova
Ive De Smet
Bruno PA Cammue
A1
Journal Article
in
PLANT CELL
2015
2014
A COFRADIC protocol to study protein ubiquitination
Elisabeth Stes
Mathias Laga
Alan Walton
Noortje Samyn
Evy Timmerman
Ive De Smet
Sofie Goormachtig
Kris Gevaert
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2014
A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development
Hyunwoo Cho
Hojin Ryu
Sangchul Rho
Kristine Hill
Stephanie Smith
Dominique Audenaert
Joonghyuk Park
Soeun Han
Tom Beeckman
Malcolm J Bennett
et al.
A1
Journal Article
in
NATURE CELL BIOLOGY
2014
Cell type-specific transcriptome analysis in the early Arabidopsis thaliana embryo
Daniel Slane
Jixiang Kong
Kenneth W Berendzen
Joachim Kilian
Agnes Henschen
Martina Kolb
Markus Schmid
Klaus Harter
Ulrike Mayer
Ive De Smet
et al.
A1
Journal Article
in
DEVELOPMENT
2014
Designer crops: optimal root system architecture for nutrient acquisition
Xiangpei Kong
Maolin Zhang
Ive De Smet
Zhaojun Ding
A1
Journal Article
in
TRENDS IN BIOTECHNOLOGY
2014
Evolutionary aspects of auxin signalling
Priya Ramakrishna
Ive De Smet
Bookchapter
in
Auxin and its role in plant development
2014
Omics and modelling approaches for understanding regulation of asymmetric cell divisions in Arabidopsis and other angiosperm plants
Kaisa Kajala
Priya Ramakrishna
Adam Fisher
Dominique C Bergmann
Ive De Smet
Rosangela Sozzani
Dolf Weijers
Siobhan M Brady
A1
Journal Article
in
ANNALS OF BOTANY
2014
Pericycle
Tom Beeckman
Ive De Smet
Editorial material
2014
Shaping a root system : regulating lateral versus primary root growth
Huiyu Tian
Ive De Smet
Zhaojun Ding
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2014
Understanding the RALF family: a tale of many species
Evan Murphy
Ive De Smet
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2014
2013
Abscisic acid in root growth and development
Ive De Smet
Hanma Zhang
Bookchapter
in
Plant roots : the hidden half
2013
Adventitious root induction in Arabidopsis thaliana as a model for in vitro root organogenesis
Inge Verstraeten
Tom Beeckman
Danny Geelen
Bookchapter
in
Plant organogenesis : methods and protocols
2013
Development: CLAVATA1 joins the club of root stem cell regulators
Elisabeth L Williams
Ive De Smet
Editorial material
2013
Imaging of phenotypes, gene expression, and protein localization during embryonic root formation in Arabidopsis
Cristina Llavata-Peris
Annemarie Lokerse
Barbara Möller
Bert De Rybel
Dolf Weijers
Bookchapter
in
Plant organogenesis : methods and protocols
2013
Inducible system for lateral roots in Arabidopsis thaliana and maize
Leentje Jansen
Boris Parizot
Tom Beeckman
Bookchapter
in
Plant organogenesis : methods and protocols
2013
Inference of the genetic network regulating lateral root initiation in Arabidopsis thaliana
Daniele Muraro
Ute Voß
Michael Wilson
Malcolm Bennett
Helen Byrne
Ive De Smet
Charlie Hodgman
John King
A1
Journal Article
in
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
2013
Kinematic analysis of cell division in leaves of mono- and dicotyledonous species: a basis for understanding growth and developing refined molecular sampling strategies
Hilde Nelissen
Bart Rymen
Frederik Coppens
Stijn Dhondt
Fabio Fiorani
Gerrit Beemster
Bookchapter
in
Plant organogenesis : methods and protocols
2013
Lateral root development in Arabidopsis: fifty shades of auxin
Julien Lavenus
Tatsuaki Goh
Ianto Roberts
Soazig Guyomarc'h
Mikael Lucas
Ive De Smet
Hidehiro Fukaki
Tom Beeckman
Malcolm Bennett
Laurent Laplaze
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2013
Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues
Mikaël Lucas
Kim Kenobi
Daniel von Wangenheim
Ute Voss
Kamal Swarup
Ive De Smet
Daniël Van Damme
Tara Lawrence
Benjamin Péret
Eric Moscardi
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2013
Localised ABA signalling mediates root growth plasticity
Zhaojun Ding
Ive De Smet
Editorial material
2013
Message in a bottle : small signalling peptide outputs during growth and development
Nathan Czyzewicz
Kun Yue
Tom Beeckman
Ive De Smet
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2013
Plant organogenesis: methods and protocols
Book editor
2013
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
Benjamin Péret
Alistair M Middleton
Andrew P French
Antoine Larrieu
Anthony Bishopp
Maria Njo
Darren M Wells
Silvana Porco
Nathan Mellor
Leah R Band
et al.
A1
Journal Article
in
MOLECULAR SYSTEMS BIOLOGY
2013
Small-molecule screens to study lateral root development
Dominique Audenaert
Bert De Rybel
Long Nguyen
Tom Beeckman
Bookchapter
in
Plant organogenesis : methods and protocols
2013
Synthetic molecules: helping to unravel plant signal transduction
Wei Xuan
Evan Murphy
Tom Beeckman
Dominique Audenaert
Ive De Smet
A2
Journal Article
in
JOURNAL OF CHEMICAL BIOLOGY
2013
The CEP family in land plants : evolutionary analyses, expression studies, and role in Arabidopsis shoot development
Ianto Roberts
Stephanie Smith
Bert De Rybel
Jana Van den Broeke
Wouter Smet
Sarah De Cokere
Marieke Mispelaere
Ive De Smet
Tom Beeckman
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2013
Tightly controlled WRKY23 expression mediates Arabidopsis embryo development
Wim Grunewald
Ive De Smet
Bert De Rybel
Helena Robert
Brigitte Van De Cotte
Viola Willemsen
Godelieve Gheysen
Dolf Weijers
Jiri Friml
Tom Beeckman
A1
Journal Article
in
EMBO REPORTS
2013
Transcriptional repression of BODENLOS by HD-ZIP transcription factor HB5 in Arabidopsis thaliana
Ive De Smet
Steffen Lau
Jasmin S Ehrismann
Ioannis Axiotis
Martina Kolb
Marika Kientz
Dolf Weijers
Gerd Jürgens
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2013
2012
Analyzing lateral root development : how to move forward
Ive De Smet
Philip J White
A Glyn Bengough
Lionel Dupuy
Boris Parizot
Ilda Casimiro
Renze Heidstra
Marta Laskowski
Marc Lepetit
Frank Hochholdinger
et al.
A1
Journal Article
in
PLANT CELL
2012
Genomics of auxin action in roots
Elisabeth L Williams
Ive De Smet
Bookchapter
in
Root genomics and soil interactions
2012
In silico analyses of pericycle cell populations reinforce their relation with associated vasculature in Arabidopsis
Boris Parizot
Ianto Roberts
Jeroen Raes
Tom Beeckman
Ive De Smet
A1
Journal Article
in
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
2012
Lateral root initiation: one step at a time
Ive De Smet
A1
Journal Article
in
NEW PHYTOLOGIST
2012
Root system architecture : insights from Arabidopsis and cereal crops
Stephanie Smith
Ive De Smet
A1
Journal Article
in
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
2012
Small signaling peptides in Arabidopsis development: how cells communicate over a short distance
Evan Murphy
Stephanie Smith
Ive De Smet
A1
Journal Article
in
PLANT CELL
2012
Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks
George W Bassel
Allison Gaudinier
Siobhan M Brady
Lars Hennig
Seung Y Rhee
Ive De Smet
A1
Journal Article
in
PLANT CELL
2012
Tackling drought stress: RECEPTOR-LIKE KINASES present new approaches
Alex Marshall
Reidunn B Aalen
Dominique Audenaert
Tom Beeckman
Martin R Broadley
Melinka A Butenko
Ana I Caño-Delgado
Sacco de Vries
Thomas Dresselhaus
Georg Felix
et al.
A1
Journal Article
in
PLANT CELL
2012
Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis
Wim Grunewald
Ive De Smet
Daniel R Lewis
Christian Löfke
Leentje Jansen
Geert Goeminne
Robin Vanden Bossche
Mansour Karimi
Bert De Rybel
Bartel Vanholme
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2012
2011
Arabidopsis α Aurora kinases function in formative cell division plane orientation
Daniël Van Damme
Bert De Rybel
Gustavo Gudesblat
Dmitri Demidov
Wim Grunewald
Ive De Smet
Andreas Houben
Tom Beeckman
Eugenia Russinova
A1
Journal Article
in
PLANT CELL
2011
Asymmetric cell division in land plants and algae: the driving force for differentiation
Ive De Smet
Tom Beeckman
A1
Journal Article
in
NATURE REVIEWS MOLECULAR CELL BIOLOGY
2011
Auxin triggers a genetic switch
Steffen Lau
Ive De Smet
Martina Kolb
Hans Meinhardt
Gerd Jürgens
A1
Journal Article
in
NATURE CELL BIOLOGY
2011
Unraveling the evolution of auxin signaling
Ive De Smet
Ute Voß
Steffen Lau
Michael Wilson
Ning Shao
Ruth E Timme
Ranjan Swarup
Ian Kerr
Charlie Hodgman
Ralph Bock
et al.
A1
Journal Article
in
PLANT PHYSIOLOGY
2011
2010
ABA promotes quiescence of the quiescent centre and suppresses stem cell differentiation in the Arabidopsis primary root meristem
Hanma Zhang
Woong Han
Ive De Smet
Peter Talboys
Rakesh Loya
Amaar Hassan
Honglin Rong
Gerd Jurgens
Paul Knox
Myeong-Hyeon Wang
A1
Journal Article
in
PLANT JOURNAL
2010
Bimodular auxin response controls organogenesis in Arabidopsis
Ive De Smet
Steffen Lau
Ute Voss
Steffen Vanneste
René Benjamins
Eike H Rademacher
Alexandra Schlereth
Bert De Rybel
Valya Vassileva
Wim Grunewald
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2010
Embryogenesis: the humble beginnings of plant life
Ive De Smet
Steffen Lau
Ulrike Mayer
Gerd Jürgens
A1
Journal Article
in
PLANT JOURNAL
2010
Multimodular auxin response controls lateral root development in Arabidopsis
Ive De Smet
Editorial material
2010
The roots of a new green revolution
Griet Den Herder
Gert Van Isterdael
Tom Beeckman
Ive De Smet
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2010
2009
Auxin signaling in algal lineages: fact or myth?
Steffen Lau
Ning Shao
Ralph Bock
Gerd Jürgens
Ive De Smet
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2009
Extensive expression regulation and lack of heterologous enzymatic activity of the Class II trehalose metabolism proteins from Arabidopsis thaliana
Matthew Ramon
Ive De Smet
Lies Vandesteene
Mirande Naudts
Barbara Leyman
Patrick Van Dijck
Filip Rolland
Tom Beeckman
Johan M. Thevelein
A1
Journal Article
in
PLANT CELL AND ENVIRONMENT
2009
Receptor-like kinases shape the plant
Ive De Smet
Ute Voß
Gerd Jürgens
Tom Beeckman
A1
Journal Article
in
NATURE CELL BIOLOGY
2009
2008
Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation
Boris Parizot
Laurent Laplaze
Lilian Ricaud
Elodie Boucheron-Dubuisson
Vincent Bayle
Martin Bonke
Ive De Smet
Scott R Poethig
Yka Helariutta
Jim Haseloff
et al.
A1
Journal Article
in
PLANT PHYSIOLOGY
2008
Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root
Ive De Smet
Valya Vassileva
Bert De Rybel
Mitchell P Levesque
Wim Grunewald
Daniël Van Damme
Giel Van Noorden
Mirande Naudts
Gert Van Isterdael
Rebecca De Clercq
et al.
A1
Journal Article
in
SCIENCE
2008
The auxin influx carrier LAX3 promotes lateral root emergence
Kamal Swarup
Eva Benkova
Ranjan Swarup
Ilda Casimiro
Benjamin Péret
Yaodong Yang
Geraint Parry
Erik Nielsen
Ive De Smet
Steffen Vanneste
et al.
A1
Journal Article
in
NATURE CELL BIOLOGY
2008
The evolving complexity of the auxin pathway
Steffen Lau
Gerd Jürgens
Ive De Smet
A1
Journal Article
in
PLANT CELL
2008
WRKY23 gene dosage is crucial to attenuate both the SHR-and auxin-dependent signalling in the control of root stem cell specification and maintenance
Wim Grunewald
Ive De Smet
Viola Willemsen
Dirk Inzé
Godelieve Gheysen
Jiri Friml
Tom Beeckman
C3
Conference
2008
2007
Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis
Ive De Smet
Takuya Tetsumura
Bert De Rybel
Nicolas Frei dit Frey
Laurent Laplaze
Ilda Casimiro
Ranjan Swarup
Mirande Naudts
Steffen Vanneste
Dominique Audenaert
et al.
A1
Journal Article
in
DEVELOPMENT
2007
Patterning the axis in plants: auxin in control
Ive De Smet
Gerd Jürgens
A1
Journal Article
in
CURRENT OPINION IN GENETICS & DEVELOPMENT
2007
2006
A novel role for abscisic acid emerges from underground
Ive De Smet
Hanma Zhang
Dirk Inzé
Tom Beeckman
A1
Journal Article
in
TRENDS IN PLANT SCIENCE
2006
Characterization of AtWRKY23, an Arabidopsis thaliana gene that is highly expressed in nematode induced feeding sites
Godelieve Gheysen
Wim Grunewald
Elke Van de Cappelle
Mansour Karimi
Ive De Smet
Dirk Inzé
Tom Beeckman
C1
Conference
2006
Functional analysis of a plant transcription factor that is highly upregulated upon nematode infection
Wim Grunewald
Ive De Smet
Mansour Karimi
Geert Goeminne
Kris Van Poucke
Bartel Vanholme
Dirk Inzé
Tom Beeckman
Godelieve Gheysen
C3
Conference
2006
Lateral root initiation or the birth of a new meristem
Ive De Smet
Steffen Vanneste
Dirk Inzé
Tom Beeckman
A1
Journal Article
in
PLANT MOLECULAR BIOLOGY
2006
2005
Auxin regulation of cell cycle and its role during lateral root initiation
Steffen Vanneste
Lies Maes
Ive De Smet
Kristiina Himanen
Mirande Naudts
Dirk Inzé
Tom Beeckman
A1
Journal Article
in
PHYSIOLOGIA PLANTARUM
2005
Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana
Steffen Vanneste
Bert De Rybel
Gerrit Beemster
Karin Ljung
Ive De Smet
Gert Van Isterdael
Mirande Naudts
Ryusuke Iida
Wilhelm Gruissem
Masao Tasaka
et al.
A1
Journal Article
in
PLANT CELL
2005
WRKY23 regulates auxin distribution through activation of flavonoid biosynthesis
Wim Grunewald
Ive De Smet
Steffen Vanneste
Mansour Karimi
Geert Goeminne
Dirk Inzé
Tom Beeckman
Godelieve Gheysen
C3
Conference
2005
2004
An easy and versatile embedding method for transverse sections
Ive De Smet
Peter Chaerle
Steffen Vanneste
Riet De Rycke
Dirk Inzé
Tom Beeckman
A1
Journal Article
in
JOURNAL OF MICROSCOPY-OXFORD
2004
WRKY23, a member of the WRKY transcription factor family, is involved in root development
Wim Grunewald
Mansour Karimi
Ive De Smet
Kris Van Poucke
Steffen Vanneste
Lies Maes
Tom Beeckman
Godelieve Gheysen
C3
Conference
2004
2003
An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis
Ive De Smet
Laurent Signora
Tom Beeckman
Dirk Inzé
Christine H Foyer
Hanma Zhang
A1
Journal Article
in
PLANT JOURNAL
2003
Biochemical and genetic analysis of vanadate reduction by Shewanella oneidensis MR-1
Wesley Carpentier
Koen Sandra
Ive De Smet
Riet De Rycke
Ann Brige
Lina De Smet
Jozef Van Beeumen
C1
Conference
2003
Microbial reduction and precipitation of vanadium by Shewanella oneidensis
Wesley Carpentier
Koen Sandra
Ive De Smet
Ann Brige
Lina De Smet
Jozef Van Beeumen
A1
Journal Article
in
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
2003
WRKY23, a member of the WRKY transcription factor family, is induced by parasitic nematodes
Wim Grunewald
Mansour Karimi
Ive De Smet
Tom Beeckman
Godelieve Gheysen
C3
Conference
2003
2001
ABA plays a central role in mediating them regulatory effects of nitrate on root branching in Arabidopsis
Laurent Signora
Ive De Smet
Christine H Foyer
Hanma Zhang
A1
Journal Article
in
PLANT JOURNAL
2001