Research Explorer

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Researcher

Ive De Smet

133 Results

2022

Auxin analog-induced Ca 2+ signaling is not involved in inhibition of endosomal aggregation in Arabidopsis roots

Ren WangEllie HimschootMatteo GrenziJian ChenAlaeddine SafiMelanie KrebsKarin SchumacherMoritz NowackWolfgang MoederKeiko YoshiokaDaniël Van DammeIve De SmetDanny GeelenTom BeeckmanJiří FrimlAlex CostaSteffen Vanneste

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Auxin-Responsive (Phospho)proteome Analysis Reveals Key Biological Processes and Signaling Associated with Shoot-Borne Crown Root Development in Rice

Harshita SinghZeenu SinghTingting ZhuXiangyu XuBhairavnath WaghmodeTushar GargShivani YadavDebabrata SircarIve De SmetShri Ram Yadav

U Journal Article in Plant and Cell Physiology

Field-grown soybean shows genotypic variation in physiological and seed composition responses to heat stress during seed development

Anna C. OrtizIve De SmetRosangela SozzaniAnna M. Locke

U Journal Article in Environmental and Experimental Botany

Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling

Qing LuYonghong ZhangJoakim HellnerCaterina GianniniXiangyu XuJarne PauwelsQian MaWim DejongheHuibin HanBrigitte Van De CotteFrancis ImpensKris GevaertIve De SmetJiří FrimlDaniel Martinez MolinaEugenia Russinova

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ROPGAP-dependent interaction between brassinosteroid and ROP2-GTPase signaling controls pavement cell shape in Arabidopsis

Cheng ZhangTheresa LausterWenxin TangAnaxi HoubaertShanshuo ZhuDominique EeckhoutIve De SmetGeert De JaegerThomas JacobsTongda XuSabine MüllerEugenia Russinova

A1 Journal Article in CURRENT BIOLOGY

Stress granule‐associated TaMBF1c confers thermotolerance through regulating specific mRNA translation in wheat ( Triticum aestivum )

Xuejun TianZhen QinYue ZhaoJingjing WenTianyu LanLiyuan ZhangFei WangDandan QinKuohai YuAiju ZhaoZhaorong HuYingyin YaoZhongfu NiQixin SunIve De SmetHuiru PengMingming Xin

A1 Journal Article in NEW PHYTOLOGIST

2021

Local regulation of auxin transport in root-apex transition zone mediates aluminium-induced Arabidopsis root-growth inhibition

Cuiling LiGuangchao LiuXiaoyu GengChunmei HeTaiyong QuanKen‐ichiro HayashiIve De SmetHélène S. RobertZhaojun DingZhong‐Bao Yang

A1 Journal Article in PLANT JOURNAL

Multiple cellular compartments engagement in Nicotiana benthamiana-peanut stunt virus-satRNA interactions revealed by systems biology approach

Barbara WrzesińskaAgnieszka ZmienkoLam Dai VuIve De SmetAleksandra Obrępalska-Stęplowska

A1 Journal Article in PLANT CELL REPORTS

Pharmacological and genetic manipulations of Ca2+ signaling have contrasting effects on auxin-regulated trafficking

Ren WangEllie HimschootMatteo GrenziJian ChenMelanie KrebsKarin SchumacherMoritz NowackDaniël Van DammeIve De SmetTom BeeckmanAlex CostaJiří FrimlSteffen Vanneste

Protein kinase and phosphatase control of plant temperature responses

Myrthe PraatIve De SmetMartijn van Zanten

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

The Collaboration Between Art History and Genetics – An Unlikely Marriage of Disciplines

Ive De SmetDavid Vergauwen

U Journal Article in Frontiers in Plant Science

The membrane-localized protein kinase MAP4K4/TOT3 regulates thermomorphogenesis

Lam Dai VuXiangyu XuTingting ZhuLixia PanMartijn van ZantemDorrit de JongYaowei WangTim VanremoorteleAnna M. LockeBrigitte Van De CotteNancy De WinneElisabeth StesEugenia RussinovaGeert De JaegerDaniël Van DammeCristobal UauyKris GevaertIve De Smet

A1 Journal Article in NATURE COMMUNICATIONS

Unraveling the MAX2 protein network in Arabidopsis thaliana : identification of the protein phosphatase PAPP5 as a novel MAX2 interactor

Sylwia Magdalena StrukCarolien De CuyperAnse JacobsLukas BraemAlan WaltonAnnick De KeyserStephen DepuydtLam Dai VuIve De SmetFrançois-Didier BoyerDominique EeckhoutGeert PersiauKris GevaertGeert De JaegerSofie Goormachtig

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

Warm temperature triggers JOX and ST2A-mediated jasmonate catabolism to promote plant growth

Tingting ZhuCornelia HerrfurthMingming XinTatyana SavchenkoIvo FeussnerAlain GoossensIve De Smet

A1 Journal Article in NATURE COMMUNICATIONS

2020

Expanding the mitogen-activated protein kinase (MAPK) universe : an update on MAP4Ks

Lixia PanIve De Smet

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Genomes on canvas : artist’s perspective on evolution of plant-based foods

David VergauwenIve De Smet

Editorial material

Non‐canonical AUX/IAA protein IAA33 competes with canonical AUX/IAA repressor IAA5 to negatively regulate auxin signaling

Bingsheng LvQianqian YuJiajia LiuXuejing WenZhenwei YanKongqin HuHanbing LiXiangpei KongCuiling LiHuiyu TianIve De SmetXian‐Sheng ZhangZhaojun Ding

A1 Journal Article in EMBO JOURNAL

Regulation of protein abundance by internal and external stimuli in Arabidopsis

Shanshuo ZhuIve De SmetKris Gevaert

The CEP5 peptide promotes abiotic stress tolerance, as revealed by quantitative proteomics, and attenuates the AUX/IAA equilibrium in Arabidopsis

Stephanie SmithShanshuo ZhuLisa JoosIanto RobertsNatalia NikonorovaLam Dai VuElisabeth StesHyunwoo ChoAntoine LarrieuWei XuanBenjamin GoodallBrigitte Van De CotteJessic Marie WaiteAdeline RigalSigurd R. HarboroughGeert PersiauSteffen VannesteGwendolyn K. KirschnerElien VandermarliereLennart MartensYvonne StahlDominique AudenaertJiri FrimlGeorg FelixRuediger SimonMalcolm BennettAnthony BishoppGeert De JaegerKarin LjungStefan KepinskiStephanie RobertJennifer NemhauserIldoo HwangKris GevaertTom BeeckmanIve De Smet

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

The cyclin CYCA3;4 is a postprophase target of the APC/CCCS52A2 E3-ligase controlling formative cell divisions in Arabidopsis

Alex WillemsJefri HeymanThomas EekhoutIgnacio AchónJosé Antonio Pedroza-GarciaTingting ZhuLei LiIlse VercauterenHilde Van Den DaeleBrigitte Van De CotteIve De SmetLieven De Veylder

A1 Journal Article in PLANT CELL

2019

Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase

Jelle Van LeeneChao HanAstrid GadeyneDominique EeckhoutCaroline MatthijsBernard CannootNancy De WinneGeert PersiauEveline Van De SlijkeBrigitte Van De CotteElisabeth StesMichiel Van BelVeronique StormeFrancis ImpensKris GevaertKlaas VandepoeleIve De SmetGeert De Jaeger

A1 Journal Article in NATURE PLANTS

Developmental plasticity at high temperature

Lam Dai VuXiangyu XuKris GevaertIve De Smet

A1 Journal Article in PLANT PHYSIOLOGY

Developmental programming of thermonastic leaf movement

Young-Joon ParkHyo-Jun LeeKyung-Eun GilJae Young KimJune-Hee LeeHyodong LeeHyung-Taeg ChoLam Dai VuIve De SmetChung-Mo Park

A1 Journal Article in PLANT PHYSIOLOGY

EXPANSIN A1-mediated radial swelling of pericycle cells positions anticlinal cell divisions during lateral root initiation

Priya RamakrishnaPaola Ruiz DuarteGraham A RanceMartin SchubertVera VordermaierLam Dai VuEvan MurphyAmaya Vilches BarroKamal SwarupKamaljit MoirangthemBodil JørgensenBrigitte Van De CotteTatsuaki GohZhefeng LinUte VoβTom BeeckmanMalcolm J BennettKris GevaertAlexis MaizelIve De Smet

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Feeling the heat : searching for plant thermosensors

Lam Dai VuKris GevaertIve De Smet

A1 Journal Article in TRENDS IN PLANT SCIENCE

Look closely, the beautiful may be small : precursor-derived peptides in plants

Vilde OlssonLisa JoosShanshuo ZhuKris GevaertMelinka A ButenkoIve De Smet

A1 Journal Article in Annual Review of Plant Biology

Phosphorylation mediates high temperature signalling in plants

Lam Dai VuIve De SmetKris Gevaert

Phosphorylation-mediated growth regulation in Arabidopsis

Natalia NikonorovaIve De SmetGeert De Jaeger

Phosphorylation-mediated signalling in plants

Xiangyu XuTingting ZhuNatalia NikonorovaIve De Smet

Bookchapter in Annual plant reviews online

The Plant PTM Viewer, a central resource for exploring plant protein modifications

Patrick WillemsAlison HorneThomas Van ParysSofie GoormachtigIve De SmetAlexander BotzkiFrank Van BreusegemKris Gevaert

A1 Journal Article in PLANT JOURNAL

The strawberry tales : size matters

David VergauwenIve De Smet

Editorial material

Watermelons versus Melons: A Matter of Taste

David VergauwenIve De Smet

Editorial material

2018

Arabidopsis research requires a critical re-evaluation of genetic tools

Natalia NikonorovaKun YueTom BeeckmanIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Early mannitol-triggered changes in the Arabidopsis leaf (phospho) proteome reveal growth regulators

Natalia NikonorovaLisa Van den BroeckShanshuo ZhuBrigitte Van De CotteMarieke DuboisKris GevaertDirk InzéIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Peanut stunt virus and its satellite RNA trigger changes in phosphorylation in N-benthamiana infected plants at the early stage of the infection

Barbara WrzesinskaLam Dai VuKris GevaertIve De SmetAleksandra Obrepalska-Steplowska

A1 Journal Article in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Protein language : post-translational modifications talking to each other

Lam Dai VuKris GevaertIve De Smet

A1 Journal Article in TRENDS IN PLANT SCIENCE

Proteome analysis of Arabidopsis roots

Natalia NikonorovaLam Dai VuElisabeth StesKris GevaertIve De Smet

Bookchapter in Root development : methods and protocols

Receptor kinase THESEUS1 is a rapid alkalinization factor 34 receptor in Arabidopsis

Martine GonneauThierry DesprezMarjolaine MartinVeronica G DoblasLaura BaceteFabien MiartRodnay SormaniKian HematyJulien RenouBenoit LandreinEvan MurphyBrigitte Van De CotteSamantha VernhettesIve De SmetHerman Hofte

A1 Journal Article in CURRENT BIOLOGY

Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms

Lam Dai VuTingting ZhuInge VerstraetenBrigitte Van De CotteKris GevaertIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

The auxin-regulated CrRLK1L kinase ERULUS controls cell wall composition during root hair tip growth

Sébastjen SchoenaersDaria BalcerowiczGordon BreenKristine HillMalgorzata ZdanioGregory MouilleTara J HolmanJaesung OhMichael H WilsonNatalia NikonorovaLam Dai VuIve De SmetRanjan SwarupWinnok De VosIsabel PintelonDirk AdriaensenClaire GriersonMalcolm J BennettKris Vissenberg

A1 Journal Article in CURRENT BIOLOGY

The xerobranching response represses lateral root formation when roots are not in contact with water

Beata Orman-LigezaEmily C MorrisBoris ParizotTristan LavigneAurelie BabéAleksander LigezaStephanie KleinCraig SturrockWei XuanOndřey NovákKarin LjungMaria A FernandezPedro L RodriguezIan C DoddIve De SmetFrançois ChaumontHenri BatokoClaire PérilleuxJonathan P LynchMalcolm J BennettTom BeeckmanXavier Draye

A1 Journal Article in CURRENT BIOLOGY

2017

From early farmers to Norman Borlaug : the making of modern wheat

David VergauwenIve De Smet

Editorial material

Inge VerstraetenIve De Smet

Bookchapter in eLS

Proteome profiling of wheat shoots from different cultivars

Lam Dai VuInge VerstraetenElisabeth StesMichiel Van BelFrederik CoppensKris GevaertIve De Smet

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Synergistic action of auxin and cytokinin mediates aluminum-induced root growth inhibition in Arabidopsis

Zhong-Bao YangGuangchao LiuJiajia LiuBing ZhangWenjing MengBruno MullerKen-ichiro HayashiXiansheng ZhangZhong ZhaoIve De SmetZhaojun Ding

A1 Journal Article in EMBO REPORTS

Tips and tricks for exogenous application of synthetic post-translationally modified peptides to plants

Nathan CzyzewiczElisabeth StesIve De Smet

Bookchapter in Plant hormones : methods and protocols

Transcriptional integration of paternal and maternal factors in the Arabidopsis zygote

Minako UedaErnst AichingerWen GongEdwin GrootInge VerstraetenLam Dai VuIve De SmetTetsuya HigashiyamaMasaaki UmedaThomas Laux

A1 Journal Article in GENES & DEVELOPMENT

2016

CEP5 and XIP1/CEPR1 regulate lateral root initiation in Arabidopsis

Ianto RobertsStephanie SmithElisabeth StesBert De RybelAn StaesBrigitte Van De CotteMaria NjoLise DedeyneHans DemolJulien LavenusDominique AudenaertKris GevaertTom BeeckmanIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Cellular dynamics of the primary shoot and root meristem

Lam Dai VuIve De Smet

Bookchapter in Molecular cell biology of the growth and differentiation of plant cells

Down the rabbit hole-carrots, genetics and art

David VergauwenIve De Smet

Editorial material

Fine-tuning development through antagonistic peptides : an emerging theme

Jin Suk LeeIve De Smet

Editorial material

Identification of molecular components affecting root architecture

Ianto RobertsTom BeeckmanIve De Smet

It's time for some 'site'-seeing: novel tools to monitor the ubiquitin landscape in Arabidopsis thaliana

Alan WaltonElisabeth StesNicolas CybulskiMichiel Van BelSabrina IñigoAstrid Nagels DurandEvy TimmermanJefri HeymanLaurens PauwelsLieven De VeylderAlain GoossensIve De SmetFrederik CoppensSofie GoormachtigKris Gevaert

A1 Journal Article in PLANT CELL

PP2A-3 interacts with ACR4 and regulates formative cell division in the Arabidopsis root

Kun YuePriyanka SandalElisabeth L. WilliamsEvan MurphyElisabeth StesNatalia NikonorovaPriya RamakrishnaNathan CzyzewiczLaura Montero MoralesRobert KumpfZhefeng LinBrigitte Van De CotteMudassar IqbalMichiel Van BelEveline Van De SlijkeMatthew R. MeyerAstrid GadeyneCyril ZipfelGeert De JaegerMarc Van MontaguDaniël Van DammeKris GevaertA. Gururaj RaoTom BeeckmanIve De Smet

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant peptides: taking them to the next level

Barbara De ConinckIve De Smet

Editorial material

RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation

Evan MurphyLam Dai VuLisa Van den BroeckZhefeng LinPriya RamakrishnaBrigitte Van De CotteAllison GaudinierTatsuaki GohDaniel SlaneTom BeeckmanDirk InzéSiobhan M BradyHidehiro FukakiIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

The Arabidopsis thaliana CLAVATA3/EMBRYO-SURROUNDING REGION 26 (CLE26) peptide is able to alter root architecture of Solanum lycopersicum and Brassica napus

Nathan CzyzewiczIve De Smet

A1 Journal Article in PLANT SIGNALING & BEHAVIOR

The growing story of (ARABIDOPSIS) CRINKLY 4

Nathan CzyzewiczNatalia NikonorovaMatthew R MeyerPriyanka SandalShweta ShahLam Dai VuKris GevaertA Gururaj RaoIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Up-to-date workflow for plant (phospho)proteomics identifies differential drought-responsive phosphorylation events in maize leaves

Lam Dai VuElisabeth StesMichiel Van BelHilde NelissenDavy MaddeleinDirk InzéFrederik CoppensLennart MartensKris GevaertIve De Smet

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

2015

A phylogenetic approach to study the origin and evolution of the CRINKLY4 family

Natalia NikonorovaLam Dai VuNathan CzyzewiczKris GevaertIve De Smet

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Antagonistic peptide technology for functional dissection of CLE peptides revisited

Nathan CzyzewiczMari WildhagenPietro CattaneoYvonne StahlKarine Gustavo PintoReidunn B AalenMelinka A ButenkoRüdiger SimonChristian S HardtkeIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Identification of interactors and downstream signaling of ACR4 controlling stem cell formative division in the Arabidopsis root

Kun YueTom BeeckmanIve De Smet

Modulation of Arabidopsis and monocot root architecture by CLAVATA3/EMBRYO SURROUNDING REGION 26 peptide

Nathan CzyzewiczChun-Lin ShiLam Dai VuBrigitte Van De CotteCharlie HodgmanMelinka A ButenkoIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Phosphoproteomics-based peptide ligand-receptor kinase pairing: commentary on: 'A peptide hormone and its receptor protein kinase regulate plant cell expansion'

Elisabeth StesKris GevaertIve De Smet

Editorial material

Plant hormone signalling through the eye of the mass spectrometer

Alan WaltonElisabeth StesIve De SmetSofie GoormachtigKris Gevaert

A1 Journal Article in PROTEOMICS

The plant peptidome : an expanding repertoire of structural features and biological functions

Patrizia TavorminaBarbara De ConinckNatalia NikonorovaIve De SmetBruno PA Cammue

A1 Journal Article in PLANT CELL

2014

A COFRADIC protocol to study protein ubiquitination

Elisabeth StesMathias LagaAlan WaltonNoortje SamynEvy TimmermanIve De SmetSofie GoormachtigKris Gevaert

A1 Journal Article in JOURNAL OF PROTEOME RESEARCH

A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development

Hyunwoo ChoHojin RyuSangchul RhoKristine HillStephanie SmithDominique AudenaertJoonghyuk ParkSoeun HanTom BeeckmanMalcolm J BennettDaehee HwangIve De SmetIldoo Hwang

A1 Journal Article in NATURE CELL BIOLOGY

Cell type-specific transcriptome analysis in the early Arabidopsis thaliana embryo

Daniel SlaneJixiang KongKenneth W BerendzenJoachim KilianAgnes HenschenMartina KolbMarkus SchmidKlaus HarterUlrike MayerIve De SmetMartin BayerGerd Juergens

A1 Journal Article in DEVELOPMENT

Designer crops: optimal root system architecture for nutrient acquisition

Xiangpei KongMaolin ZhangIve De SmetZhaojun Ding

A1 Journal Article in TRENDS IN BIOTECHNOLOGY

Evolutionary aspects of auxin signalling

Priya RamakrishnaIve De Smet

Bookchapter in Auxin and its role in plant development

Omics and modelling approaches for understanding regulation of asymmetric cell divisions in Arabidopsis and other angiosperm plants

Kaisa KajalaPriya RamakrishnaAdam FisherDominique C BergmannIve De SmetRosangela SozzaniDolf WeijersSiobhan M Brady

A1 Journal Article in ANNALS OF BOTANY

Tom BeeckmanIve De Smet

Editorial material

Shaping a root system : regulating lateral versus primary root growth

Huiyu TianIve De SmetZhaojun Ding

A1 Journal Article in TRENDS IN PLANT SCIENCE

Understanding the RALF family: a tale of many species

Evan MurphyIve De Smet

A1 Journal Article in TRENDS IN PLANT SCIENCE

2013

Abscisic acid in root growth and development

Ive De SmetHanma Zhang

Bookchapter in Plant roots : the hidden half

Adventitious root induction in Arabidopsis thaliana as a model for in vitro root organogenesis

Inge VerstraetenTom BeeckmanDanny Geelen

Bookchapter in Plant organogenesis : methods and protocols

Development: CLAVATA1 joins the club of root stem cell regulators

Elisabeth L WilliamsIve De Smet

Editorial material

Imaging of phenotypes, gene expression, and protein localization during embryonic root formation in Arabidopsis

Cristina Llavata-PerisAnnemarie LokerseBarbara MöllerBert De RybelDolf Weijers

Bookchapter in Plant organogenesis : methods and protocols

Inference of the genetic network regulating lateral root initiation in Arabidopsis thaliana

Daniele MuraroUte VoßMichael WilsonMalcolm BennettHelen ByrneIve De SmetCharlie HodgmanJohn King

A1 Journal Article in IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS

Kinematic analysis of cell division in leaves of mono- and dicotyledonous species: a basis for understanding growth and developing refined molecular sampling strategies

Hilde NelissenBart RymenFrederik CoppensStijn DhondtFabio FioraniGerrit Beemster

Bookchapter in Plant organogenesis : methods and protocols

Lateral root development in Arabidopsis: fifty shades of auxin

Julien LavenusTatsuaki GohIanto RobertsSoazig Guyomarc'hMikael LucasIve De SmetHidehiro FukakiTom BeeckmanMalcolm BennettLaurent Laplaze

A1 Journal Article in TRENDS IN PLANT SCIENCE

Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues

Mikaël LucasKim KenobiDaniel von WangenheimUte VossKamal SwarupIve De SmetDaniël Van DammeTara LawrenceBenjamin PéretEric MoscardiDaniel BarbeauChristophe GodinDavid SaltSoazig Guyomarc'hErnst HK StelzerAlexis MaizelLaurent LaplazeMalcolm J Bennett

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Localised ABA signalling mediates root growth plasticity

Zhaojun DingIve De Smet

Editorial material

Message in a bottle : small signalling peptide outputs during growth and development

Nathan CzyzewiczKun YueTom BeeckmanIve De Smet

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Plant organogenesis: methods and protocols

Sequential induction of auxin efflux and influx carriers regulates lateral root emergence

Benjamin PéretAlistair M MiddletonAndrew P FrenchAntoine LarrieuAnthony BishoppMaria NjoDarren M WellsSilvana PorcoNathan MellorLeah R BandIlda CasimiroJürgen Kleine-VehnSteffen VannesteIlkka SairanenRomain MalletGöran SandbergKarin LjungTom BeeckmanEva BenkovaJiri FrimlEric KramerJohn R KingIve De SmetTony PridmoreMarkus OwenMalcolm J Bennett

A1 Journal Article in MOLECULAR SYSTEMS BIOLOGY

Small-molecule screens to study lateral root development

Dominique AudenaertBert De RybelLong NguyenTom Beeckman

Bookchapter in Plant organogenesis : methods and protocols

Synthetic molecules: helping to unravel plant signal transduction

Wei XuanEvan MurphyTom BeeckmanDominique AudenaertIve De Smet

A2 Journal Article in JOURNAL OF CHEMICAL BIOLOGY

The CEP family in land plants : evolutionary analyses, expression studies, and role in Arabidopsis shoot development

Ianto RobertsStephanie SmithBert De RybelJana Van den BroekeWouter SmetSarah De CokereMarieke MispelaereIve De SmetTom Beeckman

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Tightly controlled WRKY23 expression mediates Arabidopsis embryo development

Wim GrunewaldIve De SmetBert De RybelHelena RobertBrigitte Van De CotteViola WillemsenGodelieve GheysenDolf WeijersJiri FrimlTom Beeckman

A1 Journal Article in EMBO REPORTS

Transcriptional repression of BODENLOS by HD-ZIP transcription factor HB5 in Arabidopsis thaliana

Ive De SmetSteffen LauJasmin S EhrismannIoannis AxiotisMartina KolbMarika KientzDolf WeijersGerd Jürgens

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2012

Analyzing lateral root development : how to move forward

Ive De SmetPhilip J WhiteA Glyn BengoughLionel DupuyBoris ParizotIlda CasimiroRenze HeidstraMarta LaskowskiMarc LepetitFrank HochholdingerXavier DrayeHanma ZhangMartin R BroadleyBenjamin PéretJohn P HammondHidehiro FukakiSacha MooneyJonathan P LynchPhillipe NacryUlrich SchurrLaurent LaplazePhilip BenfeyTom BeeckmanMalcolm Bennett

A1 Journal Article in PLANT CELL

Genomics of auxin action in roots

Elisabeth L WilliamsIve De Smet

Bookchapter in Root genomics and soil interactions

In silico analyses of pericycle cell populations reinforce their relation with associated vasculature in Arabidopsis

Boris ParizotIanto RobertsJeroen RaesTom BeeckmanIve De Smet

A1 Journal Article in PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Lateral root initiation: one step at a time

A1 Journal Article in NEW PHYTOLOGIST

Root system architecture : insights from Arabidopsis and cereal crops

Stephanie SmithIve De Smet

A1 Journal Article in PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Small signaling peptides in Arabidopsis development: how cells communicate over a short distance

Evan MurphyStephanie SmithIve De Smet

A1 Journal Article in PLANT CELL

Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks

George W BasselAllison GaudinierSiobhan M BradyLars HennigSeung Y RheeIve De Smet

A1 Journal Article in PLANT CELL

Tackling drought stress: RECEPTOR-LIKE KINASES present new approaches

Alex MarshallReidunn B AalenDominique AudenaertTom BeeckmanMartin R BroadleyMelinka A ButenkoAna I Caño-DelgadoSacco de VriesThomas DresselhausGeorg FelixNeil S GrahamJohn FoulkesChristine GranierThomas GrebUeli GrossniklausJohn P HammondRenze HeidstraCharlie HodgmanMichael HothornDirk InzéLars ØstergaardEugenia RussinovaRüdiger SimonAleksandra SkiryczYvonne StahlCyril ZipfelIve De Smet

A1 Journal Article in PLANT CELL

Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis

Wim GrunewaldIve De SmetDaniel R LewisChristian LöfkeLeentje JansenGeert GoeminneRobin Vanden BosscheMansour KarimiBert De RybelBartel VanholmeThomas TeichmannWout BoerjanMarc Van MontaguGodelieve GheysenGloria K MudayJiri FrimlTom Beeckman

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2011

Arabidopsis α Aurora kinases function in formative cell division plane orientation

Daniël Van DammeBert De RybelGustavo GudesblatDmitri DemidovWim GrunewaldIve De SmetAndreas HoubenTom BeeckmanEugenia Russinova

A1 Journal Article in PLANT CELL

Asymmetric cell division in land plants and algae: the driving force for differentiation

Ive De SmetTom Beeckman

A1 Journal Article in NATURE REVIEWS MOLECULAR CELL BIOLOGY

Auxin triggers a genetic switch

Steffen LauIve De SmetMartina KolbHans MeinhardtGerd Jürgens

A1 Journal Article in NATURE CELL BIOLOGY

Unraveling the evolution of auxin signaling

Ive De SmetUte VoßSteffen LauMichael WilsonNing ShaoRuth E TimmeRanjan SwarupIan KerrCharlie HodgmanRalph BockMalcolm BennettGerd JürgensTom Beeckman

A1 Journal Article in PLANT PHYSIOLOGY

2010

ABA promotes quiescence of the quiescent centre and suppresses stem cell differentiation in the Arabidopsis primary root meristem

Hanma ZhangWoong HanIve De SmetPeter TalboysRakesh LoyaAmaar HassanHonglin RongGerd JurgensPaul KnoxMyeong-Hyeon Wang

A1 Journal Article in PLANT JOURNAL

Bimodular auxin response controls organogenesis in Arabidopsis

Ive De SmetSteffen LauUte VossSteffen VannesteRené BenjaminsEike H RademacherAlexandra SchlerethBert De RybelValya VassilevaWim GrunewaldMirande NaudtsMitchell P LevesqueJasmin S EhrismannDirk InzéChristian LuschnigPhilip N BenfeyDolf WeijersMarc Van MontaguMalcolm J BennettGerd JürgensTom Beeckman

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Embryogenesis: the humble beginnings of plant life

Ive De SmetSteffen LauUlrike MayerGerd Jürgens

A1 Journal Article in PLANT JOURNAL

The roots of a new green revolution

Griet Den HerderGert Van IsterdaelTom BeeckmanIve De Smet

A1 Journal Article in TRENDS IN PLANT SCIENCE

2009

Auxin signaling in algal lineages: fact or myth?

Steffen LauNing ShaoRalph BockGerd JürgensIve De Smet

A1 Journal Article in TRENDS IN PLANT SCIENCE

Extensive expression regulation and lack of heterologous enzymatic activity of the Class II trehalose metabolism proteins from Arabidopsis thaliana

Matthew RamonIve De SmetLies VandesteeneMirande NaudtsBarbara LeymanPatrick Van DijckFilip RollandTom BeeckmanJohan M. Thevelein

A1 Journal Article in PLANT CELL AND ENVIRONMENT

Receptor-like kinases shape the plant

Ive De SmetUte VoßGerd JürgensTom Beeckman

A1 Journal Article in NATURE CELL BIOLOGY

2008

Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation

Boris ParizotLaurent LaplazeLilian RicaudElodie Boucheron-DubuissonVincent BayleMartin BonkeIve De SmetScott R PoethigYka HelariuttaJim HaseloffDominique ChriquiTom BeeckmanLaurent Nussaume

A1 Journal Article in PLANT PHYSIOLOGY

Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root

Ive De SmetValya VassilevaBert De RybelMitchell P LevesqueWim GrunewaldDaniël Van DammeGiel Van NoordenMirande NaudtsGert Van IsterdaelRebecca De ClercqJean Y WangNicholas MeuliSteffen VannesteJiri FrimlPierre HilsonGerd JürgensGwyneth C IngramDirk InzéPhilip N BenfeyTom Beeckman

A1 Journal Article in SCIENCE

The auxin influx carrier LAX3 promotes lateral root emergence

Kamal SwarupEva BenkovaRanjan SwarupIlda CasimiroBenjamin PéretYaodong YangGeraint ParryErik NielsenIve De SmetSteffen VannesteMitch P LevesqueDavid CarrierNicholas JamesVanessa CalvoKarin LjungEric KramerRebecca RobertsNeil GrahamSylvestre MarillonnetKanu PatelJonathan DG JonesChristopher G TaylorDaniel P SchachtmanSean MayGoran SandbergPhilip BenfeyJiri FrimlIan KerrTom BeeckmanLaurent LaplazeMalcolm J Bennett

A1 Journal Article in NATURE CELL BIOLOGY

The evolving complexity of the auxin pathway

Steffen LauGerd JürgensIve De Smet

A1 Journal Article in PLANT CELL

WRKY23 gene dosage is crucial to attenuate both the SHR-and auxin-dependent signalling in the control of root stem cell specification and maintenance

Wim GrunewaldIve De SmetViola WillemsenDirk InzéGodelieve GheysenJiri FrimlTom Beeckman

2007

Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis

Ive De SmetTakuya TetsumuraBert De RybelNicolas Frei dit FreyLaurent LaplazeIlda CasimiroRanjan SwarupMirande NaudtsSteffen VannesteDominique AudenaertDirk InzéMalcolm J BennettTom Beeckman

A1 Journal Article in DEVELOPMENT

Patterning the axis in plants: auxin in control

Ive De SmetGerd Jürgens

A1 Journal Article in CURRENT OPINION IN GENETICS & DEVELOPMENT

2006

A novel role for abscisic acid emerges from underground

Ive De SmetHanma ZhangDirk InzéTom Beeckman

A1 Journal Article in TRENDS IN PLANT SCIENCE

Characterization of AtWRKY23, an Arabidopsis thaliana gene that is highly expressed in nematode induced feeding sites

Godelieve GheysenWim GrunewaldElke Van de CappelleMansour KarimiIve De SmetDirk InzéTom Beeckman

Functional analysis of a plant transcription factor that is highly upregulated upon nematode infection

Wim GrunewaldIve De SmetMansour KarimiGeert GoeminneKris Van PouckeBartel VanholmeDirk InzéTom BeeckmanGodelieve Gheysen

Lateral root initiation or the birth of a new meristem

Ive De SmetSteffen VannesteDirk InzéTom Beeckman

A1 Journal Article in PLANT MOLECULAR BIOLOGY

2005

Auxin regulation of cell cycle and its role during lateral root initiation

Steffen VannesteLies MaesIve De SmetKristiina HimanenMirande NaudtsDirk InzéTom Beeckman

A1 Journal Article in PHYSIOLOGIA PLANTARUM

Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana

Steffen VannesteBert De RybelGerrit BeemsterKarin LjungIve De SmetGert Van IsterdaelMirande NaudtsRyusuke IidaWilhelm GruissemMasao TasakaDirk InzéHidehiro FukakiTom Beeckman

A1 Journal Article in PLANT CELL

WRKY23 regulates auxin distribution through activation of flavonoid biosynthesis

Wim GrunewaldIve De SmetSteffen VannesteMansour KarimiGeert GoeminneDirk InzéTom BeeckmanGodelieve Gheysen

2004

An easy and versatile embedding method for transverse sections

Ive De SmetPeter ChaerleSteffen VannesteRiet De RyckeDirk InzéTom Beeckman

A1 Journal Article in JOURNAL OF MICROSCOPY-OXFORD

WRKY23, a member of the WRKY transcription factor family, is involved in root development

Wim GrunewaldMansour KarimiIve De SmetKris Van PouckeSteffen VannesteLies MaesTom BeeckmanGodelieve Gheysen

2003

An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis

Ive De SmetLaurent SignoraTom BeeckmanDirk InzéChristine H FoyerHanma Zhang

A1 Journal Article in PLANT JOURNAL

Biochemical and genetic analysis of vanadate reduction by Shewanella oneidensis MR-1

Wesley CarpentierKoen SandraIve De SmetRiet De RyckeAnn BrigeLina De SmetJozef Van Beeumen

Microbial reduction and precipitation of vanadium by Shewanella oneidensis

Wesley CarpentierKoen SandraIve De SmetAnn BrigeLina De SmetJozef Van Beeumen

A1 Journal Article in APPLIED AND ENVIRONMENTAL MICROBIOLOGY

WRKY23, a member of the WRKY transcription factor family, is induced by parasitic nematodes

Wim GrunewaldMansour KarimiIve De SmetTom BeeckmanGodelieve Gheysen

2001

ABA plays a central role in mediating them regulatory effects of nitrate on root branching in Arabidopsis

Laurent SignoraIve De SmetChristine H FoyerHanma Zhang

A1 Journal Article in PLANT JOURNAL