Research Explorer

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Researcher

Geert Goeminne

Awards & Distinctions

63 Results

2023

Downregulation of barley ferulate 5-hydroxylase dramatically alters straw lignin structure without impact on mechanical properties

Reza ShafieiMatthew HooperChristopher McClellanHelena OakeyJennifer StephensCatherine LapierreYukiko TsujiGeert GoeminneRuben VanholmeWout Boerjan et al.

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

Drug discovery-based approach identifies new nitrification inhibitors

Fabian BeeckmanAndrzej DrozdzeckiAlexa De KnijfMario Corrochano-MonsalveSamuel BodéPieter BlomGeert GoeminneCarmen González-MuruaSebastian LückerPascal Boeckx et al.

A1 Journal Article in JOURNAL OF ENVIRONMENTAL MANAGEMENT

QT–GWAS : a novel method for unveiling biosynthetic loci affecting qualitative metabolic traits

Marlies BrouckaertMeng PengRené HöferIlias El HouariChiarina DarrahVeronique StormeYvan SaeysRuben VanholmeGeert GoeminneVitaliy I. Timokhin et al.

A1 Journal Article in MOLECULAR PLANT

Reassessing the claimed cytokinin-substituting activity of dehydrodiconiferyl alcohol glucoside

Klaas WitvrouwHoon KimRuben VanholmeGeert GoeminneJohn RalphWout BoerjanBartel Vanholme

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2022

Engineering a highly sensitive biosensor for abscisic acid in mammalian cells

Seo Woo KimKûbra AlciFemke Van GaeverYasmine DriegeKeylla BicalhoGeert GoeminneClaude LibertAlain GoossensRudi BeyaertJens Staal

A1 Journal Article in FEBS LETTERS

Flexible and digestible wood caused by viral-induced alteration of cell wall composition

Holly AllenLeo ZeefKris MorreelGeert GoeminneManoj KumarLeonardo D. GomezAndrew P. DeanAxel EckmannCinzia CasiraghiSimon J. McQueen-Mason et al.

A1 Journal Article in CURRENT BIOLOGY

How tech-savvy employees make the difference in core facilities : recognizing core facility expertise with dedicated career tracks

Saskia LippensDominique AudenaertAlexander BotzkiStefaan DerveauxBart GhesquièreGeert GoeminneReza HassanzadehJurgen HaustraeteFrancis ImpensJochen Lamote et al.

Editorial material

Opposing effects of trans- and cis‐cinnamic acid during rice coleoptile elongation

Lena VlaminckBrix De RouckSandrien DesmetThijs Van GerreweyGeert GoeminneLien De SmetVeronique StormeTina KyndtKristof DemeestereGodelieve Gheysen et al.

A1 Journal Article in PLANT DIRECT

Overexpression of the scopoletin biosynthetic pathway enhances lignocellulosic biomass processing

Lennart HoengenaertMarlies WoutersHoon KimBarbara De MeesterKris MorreelSteven VandersyppeJacob PollierSandrien DesmetGeert GoeminneJohn Ralph et al.

A1 Journal Article in SCIENCE ADVANCES

Rerouting of the lignin biosynthetic pathway by inhibition of cytosolic shikimate recycling in transgenic hybrid aspen

Shi HuNaofumi KamimuraShingo SakamotoSoichiro NaganoNaoki TakataSarah LiuGeert GoeminneRuben VanholmeMikiko UesugiMasanobu Yamamoto et al.

A1 Journal Article in PLANT JOURNAL

The donor-dependent and colon-region-dependent metabolism of (+)-catechin by colonic microbiota in the simulator of the human intestinal microbial ecosystem

Qiqiong LiFlorence Van HerreweghenMarjan De MeyGeert GoeminneTom Van de Wiele

A1 Journal Article in MOLECULES

The wound-activated ERF15 transcription factor drives Marchantia polymorpha regeneration by activating an oxylipin biosynthesis feedback loop

Yuanke LiangJefri HeymanYanli XiangWiske VandendriesscheBalkan CanherGeert GoeminneLieven De Veylder

A1 Journal Article in SCIENCE ADVANCES

Transcriptional and metabolic changes associated with internode development and reduced cinnamyl alcohol dehydrogenase activity in sorghum

Sávio Siqueira FerreiraGeert GoeminneMarcella Siqueira SimõesAndré Vicioli de Almeida PinaLeydson Gabriel Alves de LimaJade PezardAna GutiérrezJorge RencoretJenny C MortimerJosé C del Río et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

2021

CRISPR‐Cas9 editing of Caffeoyl Shikimate Esterase 1 and 2 shows their importance and partial redundancy in lignification in Populus tremula x P. alba

Lisanne de VriesMarlies BrouckaertAlexandra Alvarenga ChanocaHoon KimMatthew R. RegnerVitaliy I. TimokhinYi SunBarbara De MeesterJan Van DoorsselaereGeert Goeminne et al.

A1 Journal Article in PLANT BIOTECHNOLOGY JOURNAL

Intracellular quercetin accumulation and its impact on mitochondrial dysfunction in intestinal Caco-2 cells

Hanne VissenaekensGuy SmaggheHanne CrielCharlotte GrootaertKatleen RaesAndreja RajkovicGeert GoeminneNico BoonKristof De SchutterJohn Van Camp

A1 Journal Article in FOOD RESEARCH INTERNATIONAL

Loss of zebrafish atp6v1e1b, encoding a subunit of vacuolar ATPase, recapitulates human ARCL type 2C syndrome and identifies multiple pathobiological signatures

Lore PottieWouter Van GoolMichiel VanhooydonckFranz-Georg HanischGeert GoeminneAndreja RajkovicPaul CouckePatrick SipsBert Callewaert

A1 Journal Article in PLOS GENETICS

Maize specialized metabolome networks reveal organ-preferential mixed glycosides

Sandrien DesmetYvan SaeysKevin VerstaenRebecca DauweHoon KimClaudiu NiculaesAtsushi FukushimaGeert GoeminneRuben VanholmeJohn Ralph et al.

A1 Journal Article in COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL

Rewired phenolic metabolism and improved saccharification efficiency of a Zea mays cinnamyl alcohol dehydrogenase 2 (zmcad2) mutant

Xinyu LiuRebecca Van AckerWannes VoorendAndreas PallidisGeert GoeminneJacob PollierKris MorreelHoon KimHilde MuylleMickael Bosio et al.

A1 Journal Article in PLANT JOURNAL

2020

A century-old mystery unveiled : Sekizaisou is a natural lignin mutant

Masanobu YamamotoHirokazu TomiyamaAkio KoyamaHisato OkuizumiSarah LiuRuben VanholmeGeert GoeminneYuta HiraiHu ShiNuoendagula Nuoendagula et al.

A1 Journal Article in PLANT PHYSIOLOGY

Alterations in the phenylpropanoid pathway affect poplar ability for ectomycorrhizal colonisation and susceptibility to root-knot nematodes

Marc BehrFabien Baldacci-CrespAnnegret KohlerKris MorreelGeert GoeminneRebecca Van AckerClaire Veneault-FourreyAdeline MolGilles PilateWout Boerjan et al.

A1 Journal Article in MYCORRHIZA

Cell wall remodeling under salt stress : insights into changes in polysaccharides, feruloylation, lignification, and phenolic metabolism in maize

Dyoni M. OliveiraThatiane R. MotaFábio V. SalattaRenata C. SinzkerRadka KončitíkováDavid KopečnýRachael SimisterMariana SilvaGeert GoeminneKris Morreel et al.

A1 Journal Article in PLANT CELL AND ENVIRONMENT

Characterization of the UDP-glycosyltransferase UGT72 family in poplar and identification of genes involved in the glycosylation of monolignols

Nathanael SpeeckaertNassirou Mahamadou AdamouHadjara Amadou HassaneFabien Baldacci-CrespAdeline MolGeert GoeminneWout BoerjanPierre DuezSimon HawkinsGodfrey Neutelings et al.

A1 Journal Article in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Compensatory guaiacyl lignin biosynthesis at the expense of syringyl lignin in 4CL1-knockout poplar

Chung-Jui TsaiPeng XuLiang-Jiao XueHao HuBatbayar NyamdariRadnaa NaranXiaohong ZhouGeert GoeminneRuili GaoErica Gjersing et al.

A1 Journal Article in PLANT PHYSIOLOGY

Molecular changes concomitant with vascular system development in mature galls induced by root-knot nematodes in the model tree host Populus tremula × P. alba

Fabien Baldacci-CrespMarc BehrAnnegret KohlerNelly BadalatoKris MorreelGeert GoeminneAdeline MolJanice de Almeida EnglerWout BoerjanMondher El Jaziri et al.

A1 Journal Article in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Tailoring poplar lignin without yield penalty by combining a null and haploinsufficient CINNAMOYL-CoA REDUCTASE2 allele

Barbara De MeesterBárbara Loreto Madariaga CalderónLisanne de VriesJacob PollierGeert GoeminneJan Van DoorsselaereMingjie ChenJohn RalphRuben VanholmeWout Boerjan

A1 Journal Article in NATURE COMMUNICATIONS

2019

COSY catalyses trans-cis isomerization and lactonization in the biosynthesis of coumarins

Ruben VanholmeLisa SundinCarol SeetsoHoon KimXinyu LiuJin LiBarbara De MeesterLennart HoengenaertGeert GoeminneKris Morreel et al.

A1 Journal Article in NATURE PLANTS

Introducing curcumin biosynthesis in Arabidopsis enhances lignocellulosic biomass processing

Paula Oyarce SgroBarbara De MeesterFernando Campos De Assis FonsecaLisanne de VriesGeert GoeminneAndreas PallidisRiet De RyckeYukiko TsujiYanding LiSander Van den Bosch et al.

A1 Journal Article in NATURE PLANTS

RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family

Paul DalyChristopher McClellanMarta MalukHelena OakeyCatherine LapierreRobbie WaughJennifer StephensDavid MarshallAbdellah BarakateYukiko Tsuji et al.

A1 Journal Article in PLANT BIOTECHNOLOGY JOURNAL

2018

Vessel-specific reintroduction of CINNAMOYL-COA REDUCTASE1 (CCR1) in dwarfed ccr1 mutants restores vessel and xylary fiber integrity and increases biomass

Barbara De MeesterLisanne de VriesMerve ÖzparpucuNotburga GierlingerSander CorneillieAndreas PallidisGeert GoeminneKris MorreelMichiel De BruyneRiet De Rycke et al.

A1 Journal Article in PLANT PHYSIOLOGY

2017

Degradation of lignin β-aryl ether units in Arabidopsis thaliana expressing LigD, LigF and LigG from Sphingomonas paucimobilis SYK-6

Ewelina MnichRuben VanholmePaula Oyarce SgroSarah LiuFachuang LuGeert GoeminneBodil JørgensenMohammed S MotawieWout BoerjanJohn Ralph et al.

A1 Journal Article in PLANT BIOTECHNOLOGY JOURNAL

Different routes for conifer- and sinapaldehyde and higher saccharification upon deficiency in the dehydrogenase CAD1

Rebecca Van AckerAnnabelle DéjardinSandrien DesmetLennart HoengenaertRuben VanholmeKris MorreelFrançoise LauransHoon KimNicholas SantoroCliff Foster et al.

A1 Journal Article in PLANT PHYSIOLOGY

Silencing CAFFEOYL SHIKIMATE ESTERASE affects lignification and improves saccharification in poplar

Marina de Lyra Soriano SalemeIgor CesarinoLivia Vargas dos Santos FerreiraHoon KimRuben VanholmeGeert GoeminneRebecca Van AckerFernando Campos De Assis FonsecaAndreas PallidisWannes Voorend et al.

A1 Journal Article in PLANT PHYSIOLOGY

Silencing CHALCONE SYNTHASE in maize impedes the incorporation of tricin into lignin and increases lignin content

Nubia Barbosa EloyWannes VoorendWu LanMarina de Lyra Soriano SalemeIgor CesarinoRuben VanholmeRebecca SmithGeert GoeminneAndreas PallidisKris Morreel et al.

A1 Journal Article in PLANT PHYSIOLOGY

cis-Cinnamic acid is a novel, natural auxin efflux inhibitor that promotes lateral root formation

Ward SteenackersPetr KlímaMussa QuareshyIgor CesarinoRobert KumpfSander CorneilliePedro AraujoTom ViaeneGeert GoeminneMoritz Nowack et al.

A1 Journal Article in PLANT PHYSIOLOGY

2016

Chemical genetics uncovers novel inhibitors of lignification, including p-iodobenzoic acid targeting CINNAMATE-4-HYDROXYLASE

Dorien Van de WouwerRuben VanholmeRaphael DecouGeert GoeminneDominique AudenaertLong NguyenRené HöferEdouard PesquetBartel VanholmeWout Boerjan

A1 Journal Article in PLANT PHYSIOLOGY

The allelochemical MDCA inhibits lignification and affects auxin homeostasis

Ward SteenackersIgor CesarinoPetr KlimaMussa QuareshyRuben VanholmeSander CorneillieRobert KumpfDorien Van de WouwerKarin LjungGeert Goeminne et al.

A1 Journal Article in PLANT PHYSIOLOGY

The response of the root proteome to the synthetic strigolactone GR24 in Arabidopsis

Alan WaltonElisabeth StesGeert GoeminneLukas BraemMarnik VuylstekeCedrick MatthysCarolien De CuyperAn StaesJonathan VandenbusscheFrançois-Didier Boyer et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

2015

Introduction of chemically labile substructures into Arabidopsis lignin through the use of LigD, the C-dehydrogenase from Sphingobium sp. strain SYK-6

Yukiko TsujiRuben VanholmeYuki TobimatsuYasuyuki IshikawaClifton E FosterNaofumi KamimuraShojiro HishiyamaSaki HashimotoAmiu ShinoHirofumi Hara et al.

A1 Journal Article in PLANT BIOTECHNOLOGY JOURNAL

2014

Accumulation of N-acetylglucosamine oligomers in the plant cell wall affects plant architecture in a dose-dependent and conditional manner

Bartel VanholmeRuben VanholmeHalbay TurumtayGeert GoeminneIgor CesarinoFlorence GoubetKris MorreelJorge RencoretVincent BuloneCortwa Hooijmaijers et al.

A1 Journal Article in PLANT PHYSIOLOGY

Improved saccharification and ethanol yield from field-grown transgenic poplar deficient in cinnamoyl-CoA reductase

Rebecca Van AckerJean-Charles LepléDirk AertsVeronique StormeGeert GoeminneBart IvensFrédéric LégéeCatherine LapierreKathleen PiensMarc Van Montagu et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mutation of the inducible ARABIDOPSIS THALIANA CYTOCHROME P450 REDUCTASE2 alters lignin composition and improves saccharification

Lisa SundinRuben VanholmeJan GeerinckGeert GoeminneRené HöferHoon KimJohn RalphWout Boerjan

A1 Journal Article in PLANT PHYSIOLOGY

Side by side comparison of chemical compounds generated by aqueous pretreatments of maize stover, miscanthus and sugarcane bagasse

Leonardo D GómezRuben VanholmeSusannah BirdGeert GoeminneLuisa M TrindadeIgor PolikarpovRachael SimisterKris MorreelWout BoerjanSimon J McQueen-Mason

A1 Journal Article in BIOENERGY RESEARCH

2013

Breeding with rare defective alleles (BRDA): a natural Populus nigra HCT mutant with modified lignin as a case study

Bartel VanholmeIgor CesarinoGeert GoeminneHoon KimFabio MarroniRebecca Van AckerRuben VanholmeKris MorreelBart IvensSara Pinosio et al.

A1 Journal Article in NEW PHYTOLOGIST

Caffeoyl shikimate esterase (CSE) is an enzyme in the lignin biosynthetic pathway in Arabidopsis

Ruben VanholmeIgor CesarinoKatarzyna RatajYuguo XiaoLisa SundinGeert GoeminneHoon KimJoanna CrossKris MorreelPedro Araujo et al.

A1 Journal Article in SCIENCE

Lignification in sugarcane: biochemical characterization, gene discovery, and expression analysis in two genotypes contrasting for lignin content

Alexandra BottcherIgor CesarinoAdriana Brombini dos SantosRenato VicentiniJuliana Lischka Sampaio MayerRuben VanholmeKris MorreelGeert GoeminneJullyana Cristina Magalhães Silva MouraPaula Macedo Nobile et al.

A1 Journal Article in PLANT PHYSIOLOGY

MYB103 is required for FERULATE-5-HYDROXYLASE expression and syringyl lignin biosynthesis in Arabidopsis stems

David OhmanBrecht DemedtsManoj KumarLorenz GerberAndras GorzsasGeert GoeminneMattias HedenstromBrian EllisWout BoerjanBjorn Sundberg

A1 Journal Article in PLANT JOURNAL

Shikimate hydroxycinnamoyl transferase (HCT) activity assays in Populus nigra

Igor CesarinoRuben VanholmeGeert GoeminneBartel VanholmeWout Boerjan

A2 Journal Article in BIO-PROTOCOL

Suppression of CCR impacts metabolite profile and cell wall composition in Pinus radiata tracheary elements

Armin WagnerYuki TobimatsuGeert GoeminneLorelle PhillipsHeather FlintDiane StewardKirk TorrLloyd DonaldsonWout BoerjanJohn Ralph

A1 Journal Article in PLANT MOLECULAR BIOLOGY

2012

A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis

Ruben VanholmeVeronique StormeBartel VanholmeLisa SundinJorgen ChristensenGeert GoeminneClaire HalpinAntje RohdeKris MorreelWout Boerjan

A1 Journal Article in PLANT CELL

Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis

Wim GrunewaldIve De SmetDaniel R LewisChristian LöfkeLeentje JansenGeert GoeminneRobin Vanden BosscheMansour KarimiBert De RybelBartel Vanholme et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

2011

Science, society and biosafety of a field trial with transgenic biofuel poplars

Rebecca Van AckerVeronique StormeGeert GoeminneBart IvensRené CustersDirk AertsWim SoetaertJohn RalphNicholas SantoroJean-Charles Leplé et al.

2010

Mass spectrometry-based fragmentation as an identification tool in lignomics

Kris MorreelHoon KimFachuang LuOana DimaTakuya AkiyamaRuben VanholmeClaudiu NiculaesGeert GoeminneDirk InzéEric Messens et al.

A1 Journal Article in ANALYTICAL CHEMISTRY

Mass spectrometry-based sequencing of lignin oligomers

Kris MorreelOana DimaHoon KimFachuang LuClaudiu NiculaesRuben VanholmeRebecca DauweGeert GoeminneDirk InzéEric Messens et al.

A1 Journal Article in PLANT PHYSIOLOGY

2008

Identification of quorum sensing signal molecules and oligolignols associated with watermark disease in willow (Salix sp.)

Hanneke HuvenneGeert GoeminneMartine MaesEric Messens

A1 Journal Article in JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

2007

Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell-wall metabolism, primary metabolism, stress metabolism and photorespiration

Rebecca DauweKris MorreelGeert GoeminneBirgit GielenAntje RohdeJozef Van BeeumenJohn RalphAlain-Michel BoudetJoachim KopkaSoizic F Rochange et al.

A1 Journal Article in PLANT JOURNAL

2006

Functional analysis of a plant transcription factor that is highly upregulated upon nematode infection

Wim GrunewaldIve De SmetMansour KarimiGeert GoeminneKris Van PouckeBartel VanholmeDirk InzéTom BeeckmanGodelieve Gheysen

Genetical metabolomics of flavonoid biosynthesis in Populus : a case study

Kris MorreelGeert GoeminneVeronique StormeLieven SterckJohn RalphWouter CoppietersPeter BreyneMarijke SteenackersMichel GeorgesEric Messens et al.

A1 Journal Article in PLANT JOURNAL

2005

Metabolite profiling reveals a role for atypical cinnamyl alcohol dehydrogenase CAD1 in the synthesis of coniferyl alcohol in tobacco xylem

Isabelle DamianiKris MorreelSaïda DanounGeert GoeminneNabila YahiaouiChristiane MarqueJoachim KopkaEric MessensDeborah GoffnerWout Boerjan et al.

A1 Journal Article in PLANT MOLECULAR BIOLOGY

WRKY23 regulates auxin distribution through activation of flavonoid biosynthesis

Wim GrunewaldIve De SmetSteffen VannesteMansour KarimiGeert GoeminneDirk InzéTom BeeckmanGodelieve Gheysen

2004

Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism

Antje RohdeKris MorreelJohn RalphGeert GoeminneVanessa HostynRiet De RyckeSergei KushnirJan Van DoorsselaereJean-Paul JoseleauMarnik Vuylsteke et al.

A1 Journal Article in PLANT CELL

Phenolic profiling of caffeic acid O-methyltransferase-deficient poplar reveals novel benzodioxane oligolignols

Kris MorreelJohn RalphFachuang Lu LuGeert GoeminneRoger BussonPiet HerdewijnJan GoemanJohan Van der EyckenWout BoerjanEric Messens

A1 Journal Article in PLANT PHYSIOLOGY

Profiling of oligolignols reveals monolignol coupling conditions in lignifying poplar xylem

Kris MorreelJ RALPHH KIMFC LUGeert GoeminneS RALPHEric MessensWout Boerjan

A1 Journal Article in PLANT PHYSIOLOGY

Resistance to air-born diseases and pests induced by compost in substrate cultivation of strawberry

S BobevK WillekensGeert GoeminneTom DesmetGonzalez Van DriesscheMarc ClaeyssensJozef Van BeeumenEric MessensM Maes

A4 Journal Article in COMMUNICATIONS IN AGRICULTURAL AND APPLIED BIOLOGICAL SCIENCES