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Researcher
Gaetan De Waele
Profile
Projects
Publications & Research Data
Activities
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Patents
7
Results
2025
Harnessing machine learning to predict antibiotic susceptibility in Pseudomonas aeruginosa biofilms
Fauve Vergauwe
Gaetan De Waele
Andrea Sass
Callum Highmore
Niall Hanrahan
Yoshiki Cook
Mads Lichtenberg
Margo Cnockaert
Peter Vandamme
Sumeet Mahajan
et al.
A1
Journal Article
in
NPJ BIOFILMS AND MICROBIOMES
2025
Machine learning reveals novel compound for the improved production of chitooligosaccharides in Escherichia coli
Friederike Mey
Gaetan De Waele
Wouter Demeester
Chiara Guidi
Dries Duchi
Tomek Diederen
Hanne Kochuyt
Kirsten Van Huffel
Nicola Zamboni
Willem Waegeman
et al.
A1
Journal Article
in
NEW BIOTECHNOLOGY
2025
Pre-trained Maldi Transformers improve MALDI-TOF MS-based prediction
Gaetan De Waele
Gerben Menschaert
Peter Vandamme
Willem Waegeman
A1
Journal Article
in
COMPUTERS IN BIOLOGY AND MEDICINE
2025
Self-supervised transformers for biological data modalities
Gaetan De Waele
Willem Waegeman
Gerben Menschaert
Dissertation
2025
2024
An antimicrobial drug recommender system using MALDI-TOF MS and dual-branch neural networks
Gaetan De Waele
Gerben Menschaert
Willem Waegeman
A2
Journal Article
in
ELIFE
2024
Pre-trained Maldi Transformers improve MALDI-TOF MS-based prediction
Gaetan De Waele
Gerben Menschaert
Peter Vandamme
Willem Waegeman
Preprint
2024
2022
CpG transformer for imputation of single-cell methylomes
Gaetan De Waele
Jim Clauwaert
Gerben Menschaert
Willem Waegeman
A1
Journal Article
in
BIOINFORMATICS
2022