Research Explorer

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Researcher

Frederiek-Maarten Kerckhof

Publications & Research Data

Awards & Distinctions

90 Results

2025

Water use patterns and heat shock disinfection of domestic hot water affect the short-term microbiome dynamics

Jorien FavereFrederiek-Maarten KerckhofElisa Van KenhoveLien De BackerJelle LavergeNico BoonBart De Gusseme

A1 Journal Article in JOURNAL OF WATER PROCESS ENGINEERING

2023

Studying the pre-implantation uterine microbiota in cattle using transabdominal laparoscopic low-volume lavage : aiming for zero-contamination

Leen LietaerOsvaldo Américo Bogado PascottiniTim LacoereFrederiek-Maarten KerckhofAnn MartensTom Van de WieleGeert Opsomer

A1 Journal Article in JOURNAL OF MICROBIOLOGICAL METHODS

The nutritional composition and cell size of microbial biomass for food applications are defined by the growth conditions

Myrsini SakarikaFrederiek-Maarten KerckhofLotte Van PeteghemAlexandra Pinto Martins PereiraTim Van Den BosscheRobbin BouwmeesterRalf GabrielsDelphi Van HaverBarbara UlčarLennart Martens et al.

A1 Journal Article in MICROBIAL CELL FACTORIES

2022

From captured carbon to food : assessing production routes, cultivation strategies and their impact on the yield and quality of microbial protein from C1 compounds

Myrsini SakarikaKorneel RabaeyRamon GaniguéFrederiek-Maarten Kerckhof

2021

Cocultivating aerobic heterotrophs and purple bacteria for microbial protein in sequential photo- and chemotrophic reactors

Abbas AlloulMaarten MuysNick HertoghsFrederiek-Maarten KerckhofSiegfried E. Vlaeminck

A1 Journal Article in BIORESOURCE TECHNOLOGY

Cytometric fingerprints of gut microbiota predict Crohn's disease state

Peter RubbensRuben PropsFrederiek-Maarten KerckhofNico BoonWillem Waegeman

A1 Journal Article in ISME JOURNAL

Electrochemical and phylogenetic comparisons of oxygen-reducing electroautotrophic communities

Antonin PrévoteauFrederiek-Maarten KerckhofPeter ClauwaertKorneel Rabaey

A1 Journal Article in BIOSENSORS & BIOELECTRONICS

From biogas and hydrogen to microbial protein through co-cultivation of methane and hydrogen oxidizing bacteria

Frederiek-Maarten KerckhofMyrsini SakarikaMarie Van GielMaarten MuysPieter VermeirJo De VriezeSiegfried VlaeminckKorneel RabaeyNico Boon

A1 Journal Article in FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY

Low microbial biomass within the reproductive tract of mid-lactation dairy cows : a study approach

Leen LietaerOsvaldo Américo Bogado PascottiniEmma Hernandez-SanabriaFrederiek-Maarten KerckhofTim LacoereNico BoonLieven VlaminckGeert OpsomerTom Van de Wiele

A1 Journal Article in JOURNAL OF DAIRY SCIENCE

PhenoGMM : Gaussian mixture modeling of cytometry data quantifies changes in microbial community structure

Peter RubbensRuben PropsFrederiek-Maarten KerckhofNico BoonWillem Waegeman

A1 Journal Article in MSPHERE

Root-associated bacterial community shifts in hydroponic lettuce cultured with urine-derived fertilizer

Thijs Van GerreweyChristophe El NakhelStefania De PascaleJolien De PaepePeter ClauwaertFrederiek-Maarten KerckhofNico BoonDanny Geelen

A1 Journal Article in MICROORGANISMS

2020

A prebiotic-enhanced lipid-based nutrient supplement (LNSp) increases Bifidobacterium relative abundance and enhances short-chain fatty acid production in simulated colonic microbiota from undernourished infants

Laéticia Céline ToeFrederiek-Maarten KerckhofJana De BodtFanny B. MorelJean-Bosco OuedraogoPatrick KolsterenTom Van de Wiele

A1 Journal Article in FEMS MICROBIOLOGY ECOLOGY

Discriminating bacterial phenotypes at the population and single‐cell level : a comparison of flow cytometry and Raman spectroscopy fingerprinting

Cristina García TimermansPeter RubbensJasmine HeyseFrederiek-Maarten KerckhofRuben PropsAndre SkirtachWillem WaegemanNico Boon

A1 Journal Article in CYTOMETRY PART A

Flow cytometry as tool to monitor chain elongation performance

Kevin SabbeSylvia GildemynFrederiek-Maarten KerckhofNico BoonRamon Ganigué

Gut microbiota generation of protein-bound uremic toxins and related metabolites is not altered at different stages of chronic kidney disease see

Tessa GrypKim De PaepeRaymond VanholderFrederiek-Maarten KerckhofWim Van BiesenTom Van de WieleFrancis VerbekeMarijn SpeeckaertMarie JoossensMarie Madeleine Couttenye et al.

A1 Journal Article in KIDNEY INTERNATIONAL

Gut microbiota of migrating wild rabbit fish (Siganus guttatus) larvae have low spatial and temporal variability

Duy LePhuoc NguyenDung Nguyen NgocKristof DierckensNico BoonTim LacoereFrederiek-Maarten KerckhofJo De VriezeOlav VadsteinPeter Bossier

A1 Journal Article in MICROBIAL ECOLOGY

Microbial protein out of thin air : fixation of nitrogen gas by an autotrophic hydrogen-oxidizing bacterial enrichment

Xiaona HuFrederiek-Maarten KerckhofJustien GhesquiereKristel BernaertsPascal BoeckxPeter ClauwaertNico Boon

A1 Journal Article in ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbial protein production from methane via electrochemical biogas upgrading

Nayaret Acosta OrtizMyrsini SakarikaFrederiek-Maarten KerckhofCindy LawJo De VriezeKorneel Rabaey

A1 Journal Article in CHEMICAL ENGINEERING JOURNAL

2019

A unified framework for unconstrained and constrained ordination of microbiome read count data

Stijn HawinkelFrederiek-Maarten KerckhofLuc BijnensOlivier Thas

A1 Journal Article in PLOS ONE

Concentrations of p-cresyl - and indoxyl sulfate and their precursors in different stages of chronic kidney disease : from feces to urine

Tessa GrypKim De PaepeFrederiek-Maarten KerckhofWim Van BiesenRaymond VanholderMarie JoossensMario VaneechoutteGriet Glorieux

Cyt-Geist : current and future challenges in cytometry : reports of the CYTO 2018 conference workshops

Kamila CzechowskaJoanne LanniganLili WangJudith ArcidiaconoThomas M AshhurstRuth M BarnardSteven BauerClaudia BispoDiana L BonillaRyan R Brinkman et al.

A1 Journal Article in CYTOMETRY PART A

Determining stoichiometry and kinetics of two thermophilic nitrifying communities as a crucial step in the development of thermophilic nitrogen removal

Tom VandekerckhoveFrederiek-Maarten KerckhofChaïm De MulderSiegfried VlaeminckNico Boon

A1 Journal Article in WATER RESEARCH

Enriched hydrogen-oxidizing microbiomes show a high diversity of co-existing hydrogen-oxidizing bacteria

Elham EhsaniCharles DumolinJan ArendsFrederiek-Maarten KerckhofXiaona HuPeter VandammeNico Boon

A1 Journal Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Fingerprinting microbial communities through flow cytometry and Raman spectroscopy

Cristina García TimermansPeter RubbensFrederiek-Maarten KerckhofRuben PropsWillem WaegemanNico Boon

Fingerprinting microbial communities through flow cytometry and Raman spectroscopy

Cristina García TimermansPeter RubbensFrederiek-Maarten KerckhofRuben PropsWillem WaegemanNico Boon

Future prospects for dissecting inter-individual variability in the absorption, distribution and elimination of plant bioactives of relevance for cardiometabolic endpoints

Rikard LandbergClaudine ManachFrederiek-Maarten KerckhofAnne-Marie MinihaneRasha Noureldin M SalehBaukje De RoosFrancisco Tomas-BarberanChristine MorandTom Van de Wiele

A1 Journal Article in EUROPEAN JOURNAL OF NUTRITION

Learning single‐cell distances from cytometry data

Bac Nguyen CongPeter RubbensFrederiek-Maarten KerckhofNico BoonBernard De BaetsWillem Waegeman

A1 Journal Article in CYTOMETRY PART A

Oxygen-reducing microbial cathodes monitoring toxic shocks in tap water

Antonin PrévoteauPeter ClauwaertFrederiek-Maarten KerckhofKorneel Rabaey

A1 Journal Article in BIOSENSORS & BIOELECTRONICS

Predicting microbial biodiversity using flow cytometry and 16S rRNA gene amplicon sequencing

Peter RubbensRuben PropsFrederiek-Maarten KerckhofNico BoonWillem Waegeman

Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities

Alberto ScomaRobert HeyerRidwan Muhamad RifaiChristian DandykIan MarshallFrederiek-Maarten KerckhofAngeliki MarietouHenricus TS BoshkerFilip JR MeysmanKirsten G Malmos et al.

A1 Journal Article in ISME JOURNAL

2018

An oxygen reducing microbial cathode monitoring toxic compounds in freshwater

Antonin PrévoteauPeter ClauwaertFrederiek-Maarten KerckhofKorneel Rabaey

Characterization of spoilage markers in modified atmosphere packaged iceberg lettuce

Angelos-Gerasimos IoannidisFrederiek-Maarten KerckhofYasmine Riahi DrifMike VanderroostNico BoonPeter RagaertBruno De MeulenaerFrank Devlieghere

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota

Thanit ChalermwatanachaiRamiro Vilchez VargasGabriële HoltappelsTim LacoereRuy JaureguiFrederiek-Maarten KerckhofDietmar H PieperTom Van de WieleMario VaneechoutteThibaut Van Zele et al.

A1 Journal Article in SCIENTIFIC REPORTS

Flow cytometric fingerprinting for microbial strain discrimination and physiological characterization

Benjamin BuysschaertFrederiek-Maarten KerckhofPeter VandammeBernard De BaetsNico Boon

A1 Journal Article in CYTOMETRY PART A

Initial evenness determines diversity and cell density dynamics in synthetic microbial ecosystems

Elham EhsaniEmma Hernandez SanabriaFrederiek-Maarten KerckhofRuben PropsRamiro Vilchez VargasMarius VitalDietmar H PieperNico Boon

A1 Journal Article in SCIENTIFIC REPORTS

Label-free Raman characterization of bacteria calls for standardized procedures

Cristina García TimermansPeter RubbensFrederiek-Maarten KerckhofBenjamin BuysschaertDmitry KhalenkowWillem WaegemanAndre SkirtachNico Boon

A1 Journal Article in JOURNAL OF MICROBIOLOGICAL METHODS

Microbial transplant to shift a malodorous armpit microbiome

Chris CallewaertFrederiek-Maarten KerckhofThomas Van KeerMurielle MeunierTess PlaquetStijn HawinkelMaarten AertsPeter VandammeEmma Hernandez SanabriaJon Sanders et al.

Microbiological, chemical and sensory spoilage analysis of raw Atlantic cod (Gadus morhua) stored under modified atmospheres

Lotta KuulialaYassmin Al hageAngelos-Gerasimos IoannidisMarc SaderFrederiek-Maarten KerckhofMike VanderroostNico BoonBernard De BaetsBruno De MeulenaerPeter Ragaert et al.

A1 Journal Article in FOOD MICROBIOLOGY

Mucin degradation niche as a driver of microbiome composition and Akkermansia muciniphila abundance in a dynamic gut model is donor independent

Florence Van HerreweghenKim De PaepeHugo RoumeFrederiek-Maarten KerckhofTom Van de Wiele

A1 Journal Article in FEMS MICROBIOLOGY ECOLOGY

Pinpointing wastewater and process parameters controlling the AOB to NOB activity ratio in sewage treatment plants

Dries SeuntjensMofei HanFrederiek-Maarten KerckhofNico BoonAhmed Al-OmariImre TakacsFrancis MeerburgChaïm De MulderBernhard WettCharles Bott et al.

A1 Journal Article in WATER RESEARCH

Single-cell bacterial characterization using flow cytometry and Raman spectroscopy

Cristina García TimermansPeter RubbensFrederiek-Maarten KerckhofRuben PropsWillem WaegemanNico Boon

Wheat bran as a driver of gut microbiota niche diversification and spatial organisation

Kim De PaepeFrederiek-Maarten KerckhofJoran VerspreetChristophe M CourtinKristin VerbekeJeroen RaesTom Van de Wiele

2017

Absolute quantification of microbial taxon abundances

Ruben PropsFrederiek-Maarten KerckhofPeter RubbensJo De VriezeEmma Hernandez SanabriaWillem WaegemanPieter MonsieursFrederik HammesNico Boon

A1 Journal Article in ISME JOURNAL

Detecting phenotypes with Raman spectroscopy

Cristina García TimermansBenjamin BuysschaertPeter RubbensFrederiek-Maarten KerckhofAndre SkirtachNico Boon

Effect of operational parameters in the continuous anaerobic fermentation of cheese whey on titers, yields, productivities, and microbial community structures

Joana MB DomingosGonzalo A MartinezAlberto ScomaSerena FraraccioFrederiek-Maarten KerckhofNico BoonMaria AM ReisFabio FavaLorenzo Bertin

A1 Journal Article in ACS SUSTAINABLE CHEMISTRY & ENGINEERING

Efficient molasses fermentation under high salinity by inocula of marine and terrestrial origin

Alberto ScomaMarta ComaFrederiek-Maarten KerckhofNico BoonKorneel Rabaey

A1 Journal Article in BIOTECHNOLOGY FOR BIOFUELS

In vitro increased respiratory activity of selected oral bacteria may explain competitive and collaborative interactions in the oral microbiome

Emma Hernandez SanabriaVera SlomkaEsteban R HerreroFrederiek-Maarten KerckhofLynette ZaidelWim TeughelsNico Boon

A1 Journal Article in FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY

Initial evenness determines temporal dynamics in synthetic microbial ecosystem

Elham EhsaniEmma Hernandez SanabriaFrederiek-Maarten KerckhofRuben PropsRamiro Vilchez VargasMarius VitalDietmar H PieperNico Boon

Inter-individual differences determine the outcome of wheat bran colonization by the human gut microbiome

Kim De PaepeFrederiek-Maarten KerckhofJoran VerspreetChristophe M CourtinTom Van de Wiele

A1 Journal Article in ENVIRONMENTAL MICROBIOLOGY

Reconciliation between operational taxonomic units and species boundaries

Mohamed MysaraPeter VandammeRuben PropsFrederiek-Maarten KerckhofNatalie LeysNico BoonJeroen RaesPieter Monsieurs

A1 Journal Article in FEMS MICROBIOLOGY ECOLOGY

2016

Bacillus cereus NVH 0500/00 can adhere to mucin but cannot produce enterotoxins during gastrointestinal simulation

Varvara TsiliaFrederiek-Maarten KerckhofAndreja RajkovicMarc HeyndrickxTom Van de Wiele

A1 Journal Article in APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biotic interactions in microbial communities as modulators of biogeochemical processes : methanotrophy as a model system

Adrian HoRoey AngelAnnelies J. VeraartAnne DaebelerZhongjun JiaSang Yoon KimFrederiek-Maarten KerckhofNico BoonPaul L. E. Bodelier

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

Chronic cigarette smoke exposure induces microbial and inflammatory shifts and mucin changes in the murine gut

Liesbeth AllaisFrederiek-Maarten KerckhofStephanie VerscheureKen BrackeRebecca De SmetDebby LaukensPieter Van den AbbeeleMartine De VosNico BoonGuy Brusselle et al.

A1 Journal Article in ENVIRONMENTAL MICROBIOLOGY

Community structure, population dynamics and diversity of fungi in a full-scale membrane bioreactor (MBR) for urban wastewater treatment

P Maza-MárquezRamiro Vilchez VargasFrederiek-Maarten KerckhofE ArandaJ González-LópezB Rodelas

A1 Journal Article in WATER RESEARCH

Happily ever after?: how repeated subcultivation influences a methanotrophic marriage

Frederiek-Maarten KerckhofAdrian H HoCharlotte De RudderRobert H HeyerDirk B BenndorfKim HeylenNico Boon

New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase

Bram VekemanFrederiek-Maarten KerckhofGeert CremersPaul De VosPeter VandammeNico BoonHuub JM Op den CampKim Heylen

A1 Journal Article in ENVIRONMENTAL MICROBIOLOGY

The methanotrophic interactome: microbial partnerships for sustainable methane cycling

Frederiek-Maarten KerckhofNico BoonKim Heylen

To poison or not?: a proteomic approach to quantify enterotoxins produced from Bacillus cereus

Varvara TsiliaSimon DevosAndreja RajkovicTom Van de WieleMarc HeyndrickxFrederiek-Maarten KerckhofBart Devreese

2015

Bacillus cereus adhesion to simulated intestinal mucus is determined by its growth on mucin, rather than intestinal environmental parameters

Varvara TsiliaMieke UyttendaeleFrederiek-Maarten KerckhofAndreja RajkovicMarc HeyndrickxTom Van de Wiele

A1 Journal Article in FOODBORNE PATHOGENS AND DISEASE

Bacterial exchange in household washing machines

Chris CallewaertSam Van NevelFrederiek-Maarten KerckhofMichael S GranitsiotisNico Boon

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

Effects of irradiation on epithelial wound healing and microbial diversity in an in-vitro oral mucosa model

Tine De RyckTom BoterbergFrederiek-Maarten KerckhofJoachim De SchrijverMarc BrackeTom Van De WieleBarbara Vanhoecke

A2 Journal Article in JOURNAL OF NUCLEAR MEDICINE AND RADIATION THERAPY

Enhancing microbial cryopreservation: from fastidious microbes to mixed communities

Frederiek-Maarten KerckhofBram VekemanAnnelies GeirnaertEmilie CourtensRamiro Vilchez VargasAdrian HoKim HeylenNico Boon

Exploring methane-oxidizing communities for the co-metabolic degradation of organic micropollutants

Jessica BennerDelfien De SmetAdrian HoFrederiek-Maarten KerckhofLynn VanhaeckeKim HeylenNico Boon

A1 Journal Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Long-chain hydrocarbon degraders from deep-sea

Alberto ScomaRidwan Muhamad RifaiEmma PiniEmma Hernandez SanabriaFrederiek-Maarten KerckhofNico Boon

Microbial interdependencies in an enriched aerobic mixed methanotrophic community

Frederiek-Maarten KerckhofAdrian HoMichael SG GranitsiotisKim HeylenNico Boon

2014

Characterisation of the human malodorous axillary microbiome and a novel treatment to obtain a better body odour

Chris CallewaertFrederiek-Maarten KerckhofThomas Van KeerTess PlaquetMurielle MeunierJESSICA BOSTOENLesley VerhofstadtTom Van de WieleNico Boon

Development of an oral mucosa model to study host-microbiome interactions during wound healing

Tine De RyckCharlotte GrootaertLaura JaspaertFrederiek-Maarten KerckhofMireille Van GeleJoachim De SchrijverPieter Van den AbbeeleSimon SwiftMarc BrackeTom Van de Wiele et al.

A1 Journal Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Microbial odor profile of polyester and cotton clothes after a fitness session

Chris CallewaertEvelyn De MaeseneireFrederiek-Maarten KerckhofArne VerliefdeTom Van de WieleNico Boon

A1 Journal Article in APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Optimized cryopreservation of mixed microbial communities for conserved functionality and diversity

Frederiek-Maarten KerckhofEmilie CourtensAnnelies GeirnaertSven HoefmanAdrian HoRamiro Vilchez VargasDietmar H PieperRuy JaureguiSiegfried VlaeminckTom Van de Wiele et al.

A1 Journal Article in PLOS ONE

The effect of chronic cigarette smoke exposure on gut microbial diversity in healthy mice

Liesbeth AllaisFrederiek-Maarten KerckhofStephanie VerscheureKen BrackeRebecca De SmetDebby LaukensPieter Van den AbbeeleMartine De VosNico BoonGuy Brusselle et al.

The effect of chronic cigarette smoke exposure on the gut microbiome in healthy mice

Liesbeth AllaisFrederiek-Maarten KerckhofStephanie VerscheureKen BrackeRebecca De SmetDebby LaukensPieter Van den AbbeeleMartine De VosNico BoonGuy Brusselle et al.

2013

Barcoded pyrosequencing analysis of the microbial community in a simulator of the human gastrointestinal tract showed a colon region-specific microbiota modulation for two plant-derived polysaccharide blends

Massimo MarzoratiLoïs MaignienAn VerhelstGabriela LutaRobert SinnottFrederiek-Maarten KerckhofNico BoonTom Van de WieleSam Possemiers

A1 Journal Article in ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model

Pieter Van den AbbeeleClara BelzerMargot GoossensMichiel KleerebezemWillem M De VosOlivier ThasRosemarie De WeirdtFrederiek-Maarten KerckhofTom Van de Wiele

A1 Journal Article in ISME JOURNAL

Characterization of Staphylococcus and Corynebacterium clusters in the human axillary region

Chris CallewaertFrederiek-Maarten KerckhofMichael S GranitsiotisMireille Van GeleTom Van de WieleNico Boon

A1 Journal Article in PLOS ONE

Chronic cigarette smoke exposure alters the murine gut microbiome

Liesbeth AllaisFrederiek-Maarten KerckhofStephanie VerschuereKen BrackeRebecca De SmetDebby LaukensMartine De VosNico BoonGuy BrusselleTom Van de Wiele et al.

Chronic cigarette smoke exposure alters the murine gut microbiome

Liesbeth AllaisFrederiek-Maarten KerckhofStephanie VerschuereKen BrackeRebecca De SmetDebby LaukensMartine De VosNico BoonGuy BrusselleTom Van de Wiele et al.

Chronic cigarette smoke exposure alters the murine gut microbiome

Liesbeth AllaisFrederiek-Maarten KerckhofStephanie VerscheureKen BrackeRebecca De SmetDebby LaukensMartine De VosNico BoonGuy BrusselleTom Van de Wiele et al.

Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies

Adrian HoFrederiek-Maarten KerckhofClaudia LukeAndreas ReimSascha KrauseNico BoonPaul LE Bodelier

A1 Journal Article in ENVIRONMENTAL MICROBIOLOGY REPORTS

Exploration and prediction of interactions between methanotrophs and heterotrophs

Michiel StockSven HoefmanFrederiek-Maarten KerckhofNico BoonPaul De VosBernard De BaetsKim HeylenWillem Waegeman

A1 Journal Article in RESEARCH IN MICROBIOLOGY

2012

An environmental multiresistance plasmid can be transferred to foodborne pathogens

Eva Van MeervenneEls Van CoillieFrederiek-Maarten KerckhofFrank DevlieghereLieve HermanLeen De GelderEva TopNico Boon

An environmental multiresistance plasmid can be transferred to foodborne pathogens

Eva Van MeervenneEls Van CoillieFrederiek-Maarten KerckhofFrank DevlieghereLieve HermanLeen De GelderEva TopNico Boon

Conversion of biogas to bioproducts by algae and methane oxidizing bacteria

David van der HaLeen NachtergaeleFrederiek-Maarten KerckhofDevi RameiyantiPeter BossierWilly VerstraeteNico Boon

A1 Journal Article in ENVIRONMENTAL SCIENCE & TECHNOLOGY

Selecting nitrifying inocula on different ammonium concentrations

Ivar ZekkerSiegfried VlaeminckSamik BagchiEmilie CourtensHaydée De ClippeleirFrederiek-Maarten KerckhofNico Boon

A4 Journal Article in COMMUNICATIONS IN AGRICULTURAL AND APPLIED BIOLOGICAL SCIENCES

Specific butyrate-producing Clostridium cluster XIVa species colonize the mucosal environment of a novel in vitro gut model

Pieter Van den AbbeeleClara BelzerMargot GoossensMichiel KleerebezemWillem De VosOlivier ThasRosemarie De WeirdtFrederiek-Maarten KerckhofTom Van de Wiele

Specific Clostridium cluster XIVa species drive the mucosal butyrate production

Pieter Van den AbbeeleClara BelzerMargot GoossensMichiel KleerebezemWillem De VosOlivier ThasRosemarie De WeirdtFrederiek-Maarten KerckhofTom Van de Wiele

Strain-specific transfer of antibiotic resistance from an environmental plasmid to foodborne pathogens

Eva Van MeervenneEls Van CoillieFrederiek-Maarten KerckhofFrank DevlieghereLieve HermanLeen De GelderEva M TopNico Boon

A1 Journal Article in JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

The bacterial fingerprint of the armpit and its variation in time

Chris CallewaertFrederiek-Maarten KerckhofTom Van de WieleNico Boon

The human axillary environment harbors 2 microbiome ecotypes

Chris CallewaertFrederiek-Maarten KerckhofMS GranitsiotisMireille Van GeleTom Van de WieleNico Boon

The human axillary environment harbors two microbiome ecotypes

Chris CallewaertFrederiek-Maarten KerckhofMireille Van GeleTom Van de WieleNico Boon

2011

PROKAR‐SEQ: an analysis and visualization framework for next‐generation sequencing based quantification of prokaryotic communities

Joachim De SchrijverPieter-Jan VoldersFrederiek-Maarten KerckhofDagmar ObbelsElie VerleyenWim VyvermanTim De MeyerWim Van Criekinge