Manage settings
MENU
About this site
In het Nederlands
Home
Researchers
Projects
Organisations
Publications
Infrastructure
Contact
Research Explorer
Your browser does not support JavaScript or JavaScript is not enabled. Without JavaScript some functions of this webapplication may be disabled or cause error messages. To enable JavaScript, please consult the manual of your browser or contact your system administrator.
Onderzoeker
Filip Van Nieuwerburgh
Profile
Projects
Publications
Activities
Awards & Distinctions
358
Resultaten
2025
Aleurone supplementation enhances the metabolic benefits of training in Standardbred mares : impacts on glucose-insulin dynamics and gut microbiome composition
Berit Boshuizen
Lorie De Maré
Maarten Oosterlinck
Filip Van Immerseel
Venessa Eeckhaut
Constance De meeûs
Lindsey Devisscher
Carmen Vidal Moreno de Vega
Maarten Willems
Jean Eduardo De Oliveira
et al.
A1
Journal Article
in
FRONTIERS IN PHYSIOLOGY
2025
Exploring mode of action for acute toxicity of primary aromatic amines with Daphnia magna using differential gene expression analysis
Friedel Dewulf
Ilias Semmouri
Filip Van Nieuwerburgh
Karel De Schamphelaere
Jana Asselman
A1
Journal Article
in
JOURNAL OF HAZARDOUS MATERIALS
2025
Exploring seasonal dynamics of sea spray aerosol bioactivity : insights into molecular effects on human bronchial epithelial cells
Zixia Liu
Emmanuel Van Acker
Maarten De Rijcke
Filip Van Nieuwerburgh
Colin Janssen
Jana Asselman
A1
Journal Article
in
ENVIRONMENT INTERNATIONAL
2025
HNRNPC and m6A RNA methylation control oncogenic transcription and metabolism in T-cell leukemia
Jonas De Kesel
Igor Fijalkowski
Tim Pieters
Cristina Borin
Kasper Thorhauge Christensen
Manou Wittouck
Jolien Van Laere
Laura Guerrero
Lindy Reunes
Marino Caruso
et al.
A1
Journal Article
in
BLOOD
2025
Mitochondrial dysfunction characterises the multigenerational effects of maternal obesity on MASLD
Anneleen Heldens
Milton Boaheng Antwi
Louis Onghena
Tim Meese
Yannick Gansemans
Joél Smet
Ellen Dupont
Xavier Verhelst
Sarah Raevens
Hans Van Vlierberghe
et al.
A1
Journal Article
in
JHEP REPORTS
2025
Mitochondrial dysfunction characterises the multigenerational effects of maternal obesity on MASLD
Anneleen Heldens
Milton Boaheng Antwi
Louis Onghena
Tim Meese
Yannick Gansemans
Joél Smet
Ellen Dupont
Xavier Verhelst
Sarah Raevens
Hans Van Vlierberghe
et al.
U
Journal Article
in
JHEP REPORTS
2025
Whole exome sequencing as a screening tool in dogs : a pilot study
Fréderique Boeykens
Evelien Bogaerts
Liesbeth Vossaert
Luc Peelman
Filip Van Nieuwerburgh
Jimmy Saunders
Bart Broeckx
A1
Journal Article
in
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL
2025
2024
A dual role for PSIP1/LEDGF in T cell acute lymphoblastic leukemia
Lisa Demoen
Filip Matthijssens
Lindy Reunes
Bruno Palhais
Béatrice Lintermans
Sara T'Sas
Igor Fijalkowski
Joachim Taminau
Muluembet Z. Akele
Siska Van Belle
et al.
A1
Journal Article
in
SCIENCE ADVANCES
2024
A proteogenomic atlas of the human neural retina
Tabea V. Riepe
Merel Stemerdink
Renee Salz
Alfredo Dueñas Rey
Suzanne E. de Bruijn
Erica Boonen
Tomasz Z. Tomkiewicz
Michael Kwint
Jolein Gloerich
Hans J. C. T. Wessels
et al.
A1
Journal Article
in
FRONTIERS IN GENETICS
2024
A sequencing-centric future for enhanced healthcare : refining patient genotyping in personalized medicine and accelerating monoclonal antibody development
Kaat Rubben
Filip Van Nieuwerburgh
Dieter Deforce
Dissertation
2024
A spatial human thymus cell atlas mapped to a continuous tissue axis
Nadav Yayon
Veronika R. Kedlian
Lena Boehme
Chenqu Suo
Brianna T. Wachter
Rebecca T. Beuschel
Oren Amsalem
Krzysztof Polanski
Simon Koplev
Elizabeth Tuck
et al.
A1
Journal Article
in
NATURE
2024
An in-depth investigation of the microbiota and its virulence factors associated with severe udder cleft dermatitis lesions
Anne-Sofie Vermeersch
M. Ali
Yannick Gansemans
Filip Van Nieuwerburgh
Richard Ducatelle
Peter Geldhof
Dieter Deforce
J. Callens
Geert Opsomer
A1
Journal Article
in
JOURNAL OF DAIRY SCIENCE
2024
Applications of nanopore sequencing for forensic analysis
Olivier Tytgat
Filip Van Nieuwerburgh
Bookchapter
in
Next generation sequencing (NGS) technology in DNA analysis
2024
Average nucleotide identity and digital DNA-DNA hybridization analysis following PromethION nanopore-based whole genome sequencing allows for accurate prokaryotic typing
Nick Versmessen
Marieke Mispelaere
Marjolein Vandekerckhove
Cedric Hermans
Jerina Boelens
Katleen Vranckx
Filip Van Nieuwerburgh
Mario Vaneechoutte
Paco Hulpiau
Piet Cools
A1
Journal Article
in
DIAGNOSTICS
2024
Baselining physiological parameters in three muscles across three equine breeds : what can we learn from the horse?
Carmen Vidal Moreno de Vega
Constance De meeûs
Berit Boshuizen
Lorie De Maré
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Klara Goethals
Ward De Spiegelaere
Luc Leybaert
et al.
A1
Journal Article
in
FRONTIERS IN PHYSIOLOGY
2024
Bmpr1aa modulates the severity of the skeletal phenotype in an fkbp10-deficient Bruck syndrome zebrafish model
Tamara Jarayseh
Sophie Debaenst
Hanna De Saffel
Toon Rosseel
Mauro Alessio Milazzo
Jan Willem Bek
David M Hudson
Filip Van Nieuwerburgh
Yannick Gansemans
Iván Josipovic
et al.
A1
Journal Article
in
JOURNAL OF BONE AND MINERAL RESEARCH
2024
Contribution of combined stressors on density and gene expression dynamics of the copepod Temora longicornis in the North Sea
Ilias Semmouri
Karel De Schamphelaere
Filip Van Nieuwerburgh
Dieter Deforce
Colin Janssen
Jana Asselman
A1
Journal Article
in
MOLECULAR ECOLOGY
2024
Exploring mode-of-action for acute toxicity of primary aromatic amines with D. magna using differential gene expression analysis
Friedel Dewulf
Ilias Semmouri
Filip Van Nieuwerburgh
Karel De Schamphelaere
Jana Asselman
C3
Conference
2024
Exposure-response relationship of guselkumab and the potential of serum proteomics in identifying predictive biomarker candidates in psoriasis
Rani Soenen
Lisa Schots
Z. Wang
Laurentijn Tilleman
Filip Van Nieuwerburgh
Lynda Grine
L. Temmerman
T. Hillary
A. Stockman
E. Dreesen
et al.
A1
Journal Article
in
JOURNAL OF THE EUROPEAN ACADEMY OF DERMATOLOGY AND VENEREOLOGY
2024
Expression profile and gap-junctional transfer of microRNAs in the bovine cumulus-oocyte complex
Rani Six
Camilla Benedetti
Yuan Fan
Guan XueFeng
Yannick Gansemans
Mohamed Hedia
Osvaldo Américo Bogado Pascottini
Krishna Chaitanya Pavani
Filip Van Nieuwerburgh
Dieter Deforce
et al.
A1
Journal Article
in
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
2024
From follicle to blastocyst : microRNA-34c from follicular fluid-derived extracellular vesicles modulates blastocyst quality
Camilla Benedetti
Krishna Chaitanya Pavani
Yannick Gansemans
Nima Azari-Dolatabad
Osvaldo Américo Bogado Pascottini
Luc Peelman
Rani Six
Yuan Fan
Guan XueFeng
Koen Deserranno
et al.
A1
Journal Article
in
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY
2024
Genome-wide methylome stability and parental effects in the worldwide distributed Lombardy poplar
An Vanden Broeck
Tim Meese
Pieter Verschelde
Karen Cox
Berthold Heinze
Dieter Deforce
Ellen De Meester
Filip Van Nieuwerburgh
A1
Journal Article
in
BMC BIOLOGY
2024
HES6 knockdown in human hematopoietic precursor cells reduces their in vivo engraftment potential and their capacity to differentiate into erythroid cells, B cells, T cells and plasmacytoid dendritic cells
Tamara De Vos
Nicole Oatman
Lena Boehme
Tom Putteman
Imke Velghe
Yana Van Droogenbroeck
Stijn De Munter
Michaela Cesnekova
Filip Van Nieuwerburgh
Bart Vandekerckhove
et al.
A1
Journal Article
in
HAEMATOLOGICA
2024
High prevalence of a novel circovirus in the European hedgehog (Erinaceus europaeus), a common species in decline
Kevin Mulder
Frank Pasmans
Filip Van Nieuwerburgh
Naomi Terriere
Moira Kelly
Seline Bregman
Elin Verbrugghe
An Martel
A1
Journal Article
in
TRANSBOUNDARY AND EMERGING DISEASES
2024
High-throughput single-cell screening of viable hybridomas and patient-derived antibody-secreting cells using punchable microwells
Kaat Rubben
Ann-Sophie Vander Plaetsen
Ruben Almey
Olivier Tytgat
Koen Deserranno
Jamie De Baere
Delphine Acar
Philip Meuleman
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
ARTIFICIAL CELLS NANOMEDICINE AND BIOTECHNOLOGY
2024
How temperature modulates the expression of pathogenesis-related molecules of the cross-kingdom pathogen Lasiodiplodia hormozganensis
Carina Félix
Rodrigo Silva Meneses
Micael F. M. Gonçalves
Ana S. Duarte
Jesus V. Jorrín-Novo
Yves Van de Peer
Dieter Deforce
Filip Van Nieuwerburgh
Artur Alves
Ana C. Esteves
A1
Journal Article
in
SCIENCE OF THE TOTAL ENVIRONMENT
2024
Impact of nutrient excess on physiology and metabolism of Sulfolobus acidocaldarius
Viktor Laurin Sedlmayr
Diana Széliova
Veerke De Kock
Yannick Gansemans
Filip Van Nieuwerburgh
Eveline Peeters
Julian Quehenberger
Jürgen Zanghellini
Oliver Spadiut
A1
Journal Article
in
FRONTIERS IN MICROBIOLOGY
2024
MicroRNA-146b negatively affects bovine embryo development and quality
Krishna Chaitanya Pavani
Guan XueFeng
Jayendra Chunduru
Tim Meese
Luc Peelman
Filip Van Nieuwerburgh
Dieter Deforce
An Hendrix
Kelly Tilleman
Ann Van Soom
et al.
A1
Journal Article
in
REPRODUCTION
2024
Multi-omics analysis elucidates the host-microbiome interplay in severe udder cleft dermatitis lesions in dairy cows
Anne-Sophie Vermeersch
Filip Van Nieuwerburgh
Yannick Gansemans
Mohsin Ali
Richard Ducatelle
Peter Geldhof
Dieter Deforce
J. Callens
Geert Opsomer
A2
Journal Article
in
JDS COMMUNICATIONS
2024
Myb overexpression synergizes with the loss of Pten and is a dependency factor and therapeutic target in T-cell lymphoblastic leukemia
André Pedro Pinto De Almeida
Sara T'Sas
Luca Pagliaro
Igor Fijalkowski
Wouter Sleeckx
Hannah Van Steenberge
Raffaella Zamponi
Béatrice Lintermans
Wouter Van Loocke
Bruno Palhais
et al.
A1
Journal Article
in
HEMASPHERE
2024
Mycothione reductase as a potential target in the fight against Mycobacterium abscessus infections
T. Piller
L. De Vooght
Yannick Gansemans
Filip Van Nieuwerburgh
P. Cos
A1
Journal Article
in
MSPHERE
2024
Myeloid A20 is critical for alternative macrophage polarization and type-2 immune-mediated helminth resistance
Ioanna Petta
Marie Thorp
Maarten Ciers
Gillian Blancke
Louis Boon
Tim Meese
Filip Van Nieuwerburgh
Andy Wullaert
Richard Grencis
Dirk Elewaut
et al.
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2024
Osteopontin characterizes bile duct-associated macrophages and correlates with liver fibrosis severity in primary sclerosing cholangitis
Kevin De Muynck
Lander Heyerick
Federico Francesco De Ponti
Bart Vanderborght
Tim Meese
Sanne Van Campenhout
Leen Baudonck
Eva Gijbels
Pedro M. Rodrigues
Jesus M. Banales
et al.
A1
Journal Article
in
HEPATOLOGY
2024
Proteomics data in vitiligo : a scoping review
Danique Berrevoet
Filip Van Nieuwerburgh
Dieter Deforce
Reinhart Speeckaert
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2024
2023
A spatial human thymus cell atlas mapped to a continuous tissue axis
Nadav Yayon
Veronika R. Kedlian
Lena Böhme
Chenqu Suo
Brianna Wachter
Rebecca T. Beuschel
Oren Amsalem
Krzysztof Polanski
Simon Koplev
Elizabeth Tuck
et al.
Preprint
2023
A tapt1 knock-out zebrafish line with aberrant lens development and impaired vision models human early-onset cataract
Tamara Jarayseh
Brecht Guillemyn
Hanna De Saffel
Jan Willem Bek
Delfien Syx
Sofie Symoens
Yannick Gansemans
Filip Van Nieuwerburgh
Sujatha Jagadeesh
Jayarekha Raja
et al.
A1
Journal Article
in
HUMAN GENETICS
2023
Baselining physiological parameters in posture versus locomotion muscles across breeds towards tailored dietary and training management
Carmen Vidal Moreno de Vega
Constance De meeûs
Berit Boshuizen
Lorie De Maré
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Klara Goethals
Ward De Spiegelaere
Elisabeth-Lidwien J.M.M. Verdegaal
et al.
C3
Conference
2023
Cathepsin-L secreted by high-quality bovine embryos exerts an embryotrophic effect in vitro
Annelies Raes
Eline Wydooghe
Krishna Chaitanya Pavani
Osvaldo Américo Bogado Pascottini
Katleen Van Steendam
Maarten Dhaenens
Annekatrien Boel
Sonia Heras
Björn Heindryckx
Luc Peelman
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2023
Chronic exposure to dietary compounds shifts bioenergetics in colorectal cancer
Elien Alderweireldt
Charlotte Grootaert
Andreja Rajkovic
Filip Van Nieuwerburgh
John Van Camp
Olivier De Wever
C3
Conference
2023
Comparative transcriptomics of porcine liver-resident CD8αdim, liver CD8αhigh and circulating blood CD8αhigh NK cells reveals an intermediate phenotype of liver CD8αhigh NK cells
Leen Hermans
Sofie Denaeghel
Robert J. J. Jansens
Steffi De Pelsmaeker
Filip Van Nieuwerburgh
Dieter Deforce
Everardo Hegewisch-Solloa
Emily M. Mace
Eric Cox
Bert Devriendt
et al.
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2023
Complete mitochondrial genome of the corn leafhopper Dalbulus maidis (Hemiptera: Cicadellidae)
H. Pozebon
G. A. Ugalde
Yannick Gansemans
Guy Smagghe
Filip Van Nieuwerburgh
G. R. Sturmer
W. T. Tay
J. A. Arnemann
A2
Journal Article
in
GENETICS AND MOLECULAR RESEARCH
2023
Dynamic of training and acute exercised-induced shifts in muscular glucose transporter (GLUT) 4, 8 and 12 expression in locomotion versus posture muscles in healthy horses.
Carmen Vidal Moreno de Vega
Diete Lemmens
Constance De meeûs
Berit Boshuizen
Lorie De Maré
Luc Leybaert
Klara Goethals
Jean Eduardo de Oliveira
Guilherme Hosotani
Dieter Deforce
et al.
C3
Conference
2023
Dynamics of training and acute exercise-induced shifts in muscular glucose transporter (GLUT) 4, 8, and 12 expression in locomotion versus posture muscles in healthy horses
Carmen Vidal Moreno de Vega
Diete Lemmens
Constance de Meeus d'Argenteuil
Berit Boshuizen
Lorie De Maré
Luc Leybaert
Klara Goethals
Jean Eduardo de Oliveira
Guilherme Hosotani
Dieter Deforce
et al.
A1
Journal Article
in
FRONTIERS IN PHYSIOLOGY
2023
Effect of aleurone on glucose & insuline dynamics and gut microbiome of trained horses
Berit Boshuizen
Lorie De Maré
Constance De meeûs
Lindsey Devisscher
Carmen Vidal Moreno de Vega
Jean Eduardo de Oliveire
Guilherme Hosotani
Yannick Gansemans
Tim Meese
Filip Van Nieuwerburgh
et al.
C3
Conference
2023
Effect on colorectal cancer bioenergetics by chronic exposure to red meat metabolites
Elien Alderweireldt
Charlotte Grootaert
Andreja Rajkovic
Filip Van Nieuwerburgh
Stijn Luca
John Van Camp
Olivier De Wever
C3
Conference
2023
Effects of biologics treatment in type 2-high chronic rhinosinusitis with nasal polyp patients
Sharon Van Nevel
Tim Meese
Gabriële Holtappels
Natalie De Ruyck
Stijn Vanhee
Nan Zhang
Filip Van Nieuwerburgh
Claus Bachert
C3
Conference
2023
Elucidating the combined toxicity of aflatoxin B1 and fumonisin B1 on HepG2 cells based on respirometry and transcriptome analyses
Xiangrong Chen
Mohamed Fathi Abdallah
Charlotte Grootaert
Filip Van Nieuwerburgh
Andreja Rajkovic
Preprint
2023
Guar gum as galactomannan source induces dysbiosis and reduces performance in broiler chickens and dietary β-mannanase restores the gut homeostasis
Marielen de Souza
Venessa Eeckhaut
Evy Goossens
Richard Ducatelle
Filip Van Nieuwerburgh
Karl Poulsen
Ana Angelita Sampaio Baptista
Ana Paula Frederico Rodrigues Loureiro Bracarense
Filip Van Immerseel
A1
Journal Article
in
POULTRY SCIENCE
2023
HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization
Laurens Lambrechts
Noah Bonine
Rita Verstraeten
Marion Pardons
Ytse Noppe
Sofie Rutsaert
Filip Van Nieuwerburgh
Wim Van Criekinge
Basiel Cole
Linos Vandekerckhove
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2023
HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization
Laurens Lambrechts
Noah Bonine
Rita Verstraeten
Marion Pardons
Ytse Noppe
Sofie Rutsaert
Filip Van Nieuwerburgh
Wim Van Criekinge
Basiel Cole
Linos Vandekerckhove
Preprint
2023
How do engineered Yarrowia lipolytica strains secrete free fatty acids : hints from comparative transcriptomics
José Manuel Salvador López
Lea Vidal
Michelle Patricia
Filip Van Nieuwerburgh
Dieter Deforce
Jean-Marc Nicaud
Inge Van Bogaert
A1
Journal Article
in
FEMS YEAST RESEARCH
2023
Identification and profiling of a novel Bombyx mori latent virus variant acutely infecting Helicoverpa armigera and Trichoplusia ni
Thomas-Wolf Verdonckt
Anton Bilsen
Filip Van Nieuwerburgh
Loes De Troij
Dulce Santos
Jozef Vanden Broeck
A1
Journal Article
in
VIRUSES-BASEL
2023
Identification of a novel idiopathic epilepsy risk locus and a variant in the CCDC85A gene in the Dutch partridge dog
Evy Beckers
Sofie Bhatti
Mario Van Poucke
Ingeborgh Polis
Frédéric Farnir
Filip Van Nieuwerburgh
Paul Mandigers
Luc Van Ham
Luc Peelman
Bart Broeckx
A1
Journal Article
in
ANIMALS
2023
Intrathymic dendritic cell-biased precursors promote human T cell lineage specification through IRF8-driven transmembrane TNF
Kai Ling Liang
Juliette Roels
Marieke Lavaert
Tom Putteman
Lena Boehme
Laurentijn Tilleman
Imke Velghe
Valentina Pegoretti
Inge Van de Walle
Stephanie Sontag
et al.
A1
Journal Article
in
NATURE IMMUNOLOGY
2023
Molecular analysis of broad-spectrum induced resistance in rice by the green leaf volatile Z-3-hexenyl acetate
Willem Desmedt
Maarten Ameye
Osvaldo Filipe
Evelien De Waele
Filip Van Nieuwerburgh
Dieter Deforce
Lieven Van Meulebroek
Lynn Vanhaecke
Tina Kyndt
Monica Höfte
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL BOTANY
2023
Myeloid OTULIN deficiency couples RIPK3-dependent cell death to Nlrp3 inflammasome activation and IL-1β secretion
Maria Giulia Doglio
Lien Verboom
Emily Ruilova Sosoranga
Ulrika Frising
Tomoko Asaoka
Yannick Gansemans
Filip Van Nieuwerburgh
Geert van Loo
Andy Wullaert
A1
Journal Article
in
SCIENCE IMMUNOLOGY
2023
New insights into the combined toxicity of aflatoxin B1 and fumonisin B1 in HepG2 cells using Seahorse respirometry analysis and RNA transcriptome sequencing
Xiangrong Chen
Mohamed Fathi Abdallah
Charlotte Grootaert
Filip Van Nieuwerburgh
Andreja Rajkovic
A1
Journal Article
in
ENVIRONMENT INTERNATIONAL
2023
Post-feeding transcriptomics reveals essential genes expressed in the midgut of the desert locust
Joachim Van Lommel
Michiel Holtof
Laurentijn Tilleman
Dorien Cools
Seppe Vansteenkiste
Daria Polgun
Rik Verdonck
Filip Van Nieuwerburgh
Jozef Vanden Broeck
A1
Journal Article
in
FRONTIERS IN PHYSIOLOGY
2023
RIPK1 kinase-dependent inflammation and cell death contribute to the pathogenesis of COPD
Hannelore Van Eeckhoutte
Chantal Donovan
Richard Y. Kim
Thomas M. Conlon
Meshal Ansari
Haroon Khan
Ranjith Jayaraman
Nicole G. Hansbro
Yves Dondelinger
Tom Delanghe
et al.
A1
Journal Article
in
EUROPEAN RESPIRATORY JOURNAL
2023
RNA-seq and bioinformatics methods for studying embryo development and quality in bovine and equine species : challenges and opportunities
Tim Meese
Filip Van Nieuwerburgh
Dieter Deforce
Krishna Chaitanya Pavani
Dissertation
2023
STR genotyping by real-time PCR using QueSTR probes
Sonja Skevin
Olivier Tytgat
Maarten Fauvart
Liesl De Keyzer
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SENSORS AND ACTUATORS B-CHEMICAL
2023
Severe udder cleft dermatitis lesion transcriptomics points to an impaired skin barrier, defective wound repair and a dysregulated inflammatory response as key elements in the pathogenesis
Anne-Sofie Vermeersch
Mohsin Ali
Yannick Gansemans
Filip Van Nieuwerburgh
Peter Geldhof
Richard Ducatelle
Dieter Deforce
Jozefien Callens
Geert Opsomer
A1
Journal Article
in
PLOS ONE
2023
Single-cell profiling identifies a novel human polyclonal unconventional T cell lineage
Lore Billiet
Laurenz De Cock
Guillem Sanchez Sanchez
Rupert Mayer
Glenn Goetgeluk
Stijn De Munter
Melissa Pille
Joline Ingels
Hanne Jansen
Karin Weening
et al.
A1
Journal Article
in
JOURNAL OF EXPERIMENTAL MEDICINE
2023
Systematic comparison of experimental and human obstructive cholestasis reveals conservation of canonical pathway activation and biomarkers relevant for cholestatic liver disease
Eva Gijbels
Kevin De Muynck
Bart Vanderborght
Tim Meese
Filip Van Nieuwerburgh
Aude Vanlander
Frederik Berrevoet
Bart Hendrikx
Anne Hoorens
Hans Van Vlierberghe
et al.
A1
Journal Article
in
GENES & DISEASES
2023
Targeted haplotyping in pharmacogenomics using Oxford Nanopore Technologies' adaptive sampling
Koen Deserranno
Laurentijn Tilleman
Kaat Rubben
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FRONTIERS IN PHARMACOLOGY
2023
The multi-omics single-cell landscape of sinus mucosa in uncontrolled severe chronic rhinosinusitis with nasal polyps
Zhaofeng Xu
Yanran Huang
Tim Meese
Sharon Van Nevel
Gabriële Holtappels
Stijn Vanhee
Barbara M. Bröker
Zhengqi Li
Ellen De Meester
Natalie De Ruyck
et al.
A1
Journal Article
in
CLINICAL IMMUNOLOGY
2023
Transcriptional and translational dynamics underlying heat shock response in the thermophilic crenarchaeon Sulfolobus acidocaldarius
Rani Baes
Felix Grünberger
Sébastien Pyr Dit Ruys
Mohea Couturier
Sarah De Keulenaer
Sonja Skevin
Filip Van Nieuwerburgh
Didier Vertommen
Dina Grohmann
Sébastien Ferreira-Cerca
et al.
A1
Journal Article
in
MBIO
2023
Transcriptomics reveal molecular differences in equine oocytes vitrified before and after in vitro maturation
Daniel Angel Velez
Tim Meese
Mohamed Hedia
Andrea Fernández Montoro
Tine De Coster
Osvaldo Américo Bogado Pascottini
Filip Van Nieuwerburgh
Jan Govaere
Ann Van Soom
Krishna Chaitanya Pavani
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2023
2022
A tapt1 knockout zebrafish line with aberrant lens development and impaired vision models human pediatric cataract
Tamara Jarayseh
Brecht Guillemyn
Hanna De Saffel
Jan Willem Bek
Sujatha Jagadeesh
Sofie Symoens
Fransiska Malfait
Delfien Syx
Filip Van Nieuwerburgh
Yannick Gansemans
et al.
C3
Conference
2022
A tapt1 knockout zebrafish line with aberrant lens development and impaired vision models human pediatric cataract
Tamara Jarayseh
Brecht Guillemyn
Hanna De Saffel
Jan Willem Bek
Sujatha Jagadeesh
Sofie Symoens
Fransiska Malfait
Delfien Syx
Filip Van Nieuwerburgh
Yannick Gansemans
et al.
C3
Conference
2022
ADAR1 prevents autoinflammation by suppressing spontaneous ZBP1 activation
Richard de Reuver
Simon Verdonck
Evelien Dierick
Josephine Nemegeer
Eline Hessmann
Sadeem Ahmad
Maude Jans
Gillian Blancke
Filip Van Nieuwerburgh
Alexander Botzki
et al.
A1
Journal Article
in
NATURE
2022
Analyzing data independent acquisition mass spectrometry with noiseless ion-networks
Sander Willems
Simon Daled
Bart Van Puyvelde
Laura De Clerck
Sofie Vande Casteele
Filip Van Nieuwerburgh
Dieter Deforce
Maarten Dhaenens
Preprint
2022
Bringing science to the scene : novel strategies for portable DNA profiling
Olivier Tytgat
Filip Van Nieuwerburgh
Dieter Deforce
Maarten Fauvart
Dissertation
2022
Cas9 targeted nanopore sequencing with enhanced variant calling improves CYP2D6-CYP2D7 hybrid allele genotyping
Kaat Rubben
Laurentijn Tilleman
Koen Deserranno
Olivier Tytgat
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
PLOS GENETICS
2022
Continuous activation of the IL-17F driven inflammatory pathway in acute and chronic digital dermatitis lesions in dairy cattle
Anne-Sofie Vermeersch
Peter Geldhof
Richard Ducatelle
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Geert Opsomer
A1
Journal Article
in
SCIENTIFIC REPORTS
2022
DNA methylation alterations in fractionally irradiated rats and breast cancer patients receiving radiotherapy
Magy Sallam
Mohamed Mysara
Mohammed Abderrafi Benotmane
Anne P. G. Crijns
Daan Spoor
Filip Van Nieuwerburgh
Dieter Deforce
Sarah Baatout
Pieter-Jan Guns
An Aerts
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2022
Enrichment of circulating trophoblasts from maternal blood using filtration-based Metacell (R) technology
Jana Weymaere
Ann-Sophie Vander Plaetsen
YASMINE VAN DEN BRANDEN
Eliska Pospisilova
Olivier Tytgat
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
PLOS ONE
2022
Exploring and optimizing variant detection and phasing methods in pharmacogenomics
Laurentijn Tilleman
Filip Van Nieuwerburgh
Björn Heindryckx
Dieter Deforce
Dissertation
2022
Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing
Laurentijn Tilleman
Kaat Rubben
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2022
Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts
Krishna Chaitanya Pavani
Tim Meese
Osvaldo Américo Bogado Pascottini
XueFeng Guan
Xiaoyuan Lin
Luc Peelman
Joachim Hamacher
Filip Van Nieuwerburgh
Dieter Deforce
Annekatrien Boel
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2022
IRF2 is required for development and functional maturation of human NK cells
Eva Persyn
Sigrid Wahlen
Laura Kiekens
Wouter Van Loocke
Hannah Siwe
Els Van Ammel
Zenzi De Vos
Filip Van Nieuwerburgh
Patrick Matthys
Tom Taghon
et al.
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2022
Lycopene supplementation to serum-free maturation medium improves in vitro bovine embryo development and quality and modulates embryonic transcriptomic profile
Shehu Sidi
Osvaldo Américo Bogado Pascottini
Daniel Angel Velez
Nima AzariDolatabad
Krishna Chaitanya Pavani
Gretania Residiwati
Tim Meese
Filip Van Nieuwerburgh
Elias Kambai Bawa
Ambrose Alikidon Voh
et al.
A1
Journal Article
in
ANTIOXIDANTS
2022
Metabolism and health effects of rare sugars in a CACO-2/HepG2 coculture model
Amar Daniël Emanuel Van Laar
Charlotte Grootaert
Filip Van Nieuwerburgh
Dieter Deforce
Tom Desmet
Koen Beerens
John Van Camp
A1
Journal Article
in
NUTRIENTS
2022
Metallothioneins alter macrophage phenotype and represent novel therapeutic targets for acetaminophen-induced liver injury
Lindsey Devisscher
Sanne Van Campenhout
Sander Lefere
Sarah Raevens
Laurentijn Tilleman
Filip Van Nieuwerburgh
Hannelore P. Van Eeckhoutte
Anne Hoorens
Michael A. Lynes
Anja Geerts
et al.
A1
Journal Article
in
JOURNAL OF LEUKOCYTE BIOLOGY
2022
Microbial diversity and antimicrobial susceptibility in endotracheal tube biofilms recovered from mechanically ventilated COVID-19 patients
Frits van Charante
Anneleen Wieme
Petra Rigole
Evelien De Canck
Lisa Ostyn
Lucia Grassi
Dieter Deforce
Aurélie Crabbé
Peter Vandamme
Marie Joossens
et al.
A2
Journal Article
in
BIOFILM
2022
Multigenerational DNA methylation responses to copper exposure in daphnia : potential targets for epigenetic biomarkers?
Guilherme Jeremias
Telma Veloso
Fernando J.M. Gonçalves
Filip Van Nieuwerburgh
Joana Luísa Pereira
Jana Asselman
A1
Journal Article
in
CHEMOSPHERE
2022
Nanopore sequencing of a forensic combined STR and SNP multiplex
Olivier Tytgat
Sonja Skevin
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2022
PIWI proteins play an antiviral role in Lepidopteran cell lines
Dulce Santos
Thomas-Wolf Verdonckt
Lina Mingels
Stijn Van den Brande
Bart Geens
Filip Van Nieuwerburgh
Anna Kolliopoulou
Luc Swevers
Niels Wynant
Jozef Vanden Broeck
A1
Journal Article
in
VIRUSES-BASEL
2022
Phasing of the entire CYP2D6 locus with CRISPR-Cas9 enriched Nanopore sequencing
Laurentijn Tilleman
Kaat Rubben
Filip Van Nieuwerburgh
C3
Conference
2022
Profiling the aerobic window of horses in response to training by means of a modified lactate minimum speed test : flatten the curve
Lorie De Maré
Berit Boshuizen
Carmen Vidal Moreno de Vega
Constance De meeûs
Lukas Plancke
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Jean Eduardo de Oliveira
Guilherme Hosotani
et al.
A1
Journal Article
in
FRONTIERS IN PHYSIOLOGY
2022
QueSTR probes : Quencher-labeled RNase H2-dependent probes for short tandem repeat genotyping
Olivier Tytgat
Sonja Skevin
Maarten Fauvart
Tim Stakenborg
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SENSORS AND ACTUATORS B-CHEMICAL
2022
RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition
Carolina de Carvalho Nunes
Lisa Depestel
Liselot Mus
Kaylee M. Keller
Louis Delhaye
Amber Louwagie
Muhammad Rishfi
Alex Whale
Neesha Kara
Simon R. Andrews
et al.
A1
Journal Article
in
SCIENCE ADVANCES
2022
Signatures of polygenic adaptation align with genome-wide methylation patterns in wild strawberry plants
Hanne De Kort
Tuomas Toivainen
Filip Van Nieuwerburgh
Javier Andres
Timo P. Hytonen
Olivier Honnay
A1
Journal Article
in
NEW PHYTOLOGIST
2022
TXNIP promotes human NK cell development but is dispensable for NK cell functionality
Eva Persyn
Sigrid Wahlen
Laura Kiekens
Sylvie Taveirne
Wouter Van Loocke
Els Van Ammel
Filip Van Nieuwerburgh
Tom Taghon
Bart Vandekerckhove
Pieter Van Vlierberghe
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2022
The transcription factor RUNX2 drives the generation of human NK cells and promotes tissue residency
Sigrid Wahlen
Filip Matthijssens
Wouter Van Loocke
Sylvie Taveirne
Laura Kiekens
Eva Persyn
Els Van Ammel
Zenzi De Vos
Stijn De Munter
Patrick Matthys
et al.
A1
Journal Article
in
ELIFE
2022
Transcriptional dynamics and epigenetic regulation of E and ID protein encoding genes during human T cell development
Juliette Roels
Jolien Van Hulle
Marieke Lavaert
Anna Kuchmiy
Steven Strubbe
Tom Putteman
Bart Vandekerckhove
Georges Leclercq
Filip Van Nieuwerburgh
Lena Boehme
et al.
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2022
Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction
Xiaojie Liu
Jonas Blomme
Kenny Bogaert
Sofie D'hondt
Thomas Wichard
Dieter Deforce
Filip Van Nieuwerburgh
Olivier De Clerck
A1
Journal Article
in
BMC PLANT BIOLOGY
2022
Veterinarians’ competence in applying basic genetic principles and daily implementation of clinical genetics : a study in a university environment
Evelien Bogaerts
Else den Boer
Luc Peelman
Filip Van Nieuwerburgh
Hille Fieten
Jimmy Saunders
Bart Broeckx
A1
Journal Article
in
JOURNAL OF VETERINARY MEDICAL EDUCATION
2022
2021
A case of phage therapy against pandrug-resistant Achromobacter xylosoxidans in a 12-year-old lung-transplanted cystic fibrosis patient
David Lebeaux
Maia Merabishvili
Eric Caudron
Damien Lannoy
Leen Van Simaey
Hans Duyvejonck
Romain Guillemain
Caroline Thumerelle
Isabelle Podglajen
Fabrice Compain
et al.
A1
Journal Article
in
VIRUSES-BASEL
2021
ADAR1 interaction with Z-RNA promotes editing of endogenous double-stranded RNA and prevents MDA5-dependent immune activation
Richard de Reuver
Evelien Dierick
Bartosz Wiernicki
Katrien Staes
Leen Seys
Ellen De Meester
Tuur Muyldermans
Alexander Botzki
Bart Lambrecht
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
CELL REPORTS
2021
Activin A-derived human embryonic stem cells show increased competence to differentiate into primordial germ cell-like cells
Swati Mishra
Jasin Taelman
Mina Popovic
Laurentijn Tilleman
Evi Duthoo
Margot Van der Jeught
Dieter Deforce
Filip Van Nieuwerburgh
Björn Menten
Petra De Sutter
et al.
A1
Journal Article
in
STEM CELLS
2021
Annelid genomes : Enchytraeus crypticus, a soil model for the innate (and primed) immune system
Monica J. B. Amorim
Yannick Gansemans
Susana I. L. Gomes
Filip Van Nieuwerburgh
Janeck J. Scott-Fordsmand
A1
Journal Article
in
LAB ANIMAL
2021
Cell-based non-invasive prenatal testing : circulating trophoblast enrichment and genetic analysis
Jana Weymaere
Filip Van Nieuwerburgh
Dieter Deforce
Dissertation
2021
Changes in DNA methylation in Arabidopsis thaliana plants exposed over multiple generations to gamma radiation
Pol Laanen
Eline Saenen
Mohamed Mysara
Jorden van de Walle
May Van Hees
Robin Nauts
Filip Van Nieuwerburgh
Stefan Voorspoels
Griet Jacobs
Ann Cuypers
et al.
A1
Journal Article
in
FRONTIERS IN PLANT SCIENCE
2021
Characterization of the inflammatory microenvironment and hepatic macrophage subsets in experimental hepatocellular carcinoma models
Helena Degroote
Sander Lefere
Astrid Vandierendonck
Bart Vanderborght
Tim Meese
Filip Van Nieuwerburgh
Xavier Verhelst
Anja Geerts
Hans Van Vlierberghe
Lindsey Devisscher
A2
Journal Article
in
ONCOTARGET
2021
Circulating fetal trophoblast enrichment and single cell genetic analysis in the context of cell-based non-invasive prenatal testing
Ann-Sophie Vander Plaetsen
Filip Van Nieuwerburgh
Dieter Deforce
Dissertation
2021
Comparative analysis of mouse and human preimplantation development following POU5F1 CRISPR/Cas9 targeting reveals interspecies differences
Panagiotis Stamatiadis
Annekatrien Boel
Gwenny Cosemans
Mina Popovic
Bieke Bekaert
Ramesh Reddy Guggilla
Maoxing Tang
Petra De Sutter
Filip Van Nieuwerburgh
Björn Menten
et al.
A1
Journal Article
in
HUMAN REPRODUCTION
2021
Comparative genomics of Flavobacterium columnare unveils novel insights in virulence and antimicrobial resistance mechanisms
Annelies Declercq
Laurentijn Tilleman
Yannick Gansemans
Chloë De Witte
Freddy Haesebrouck
Filip Van Nieuwerburgh
Annemieke Smet
Annemie Decostere
A1
Journal Article
in
VETERINARY RESEARCH
2021
Detection of cytosine methylation in Burkholderia cenocepacia by single- molecule real- time sequencing and whole- genome bisulfite sequencing
Ian Vandenbussche
Andrea Sass
Filip Van Nieuwerburgh
Marta Pinto-Carbo
Olga Mannweiler
Leo Eberl
Tom Coenye
A1
Journal Article
in
MICROBIOLOGY-SGM
2021
Digital polymerase chain reaction for assessment of mutant mitochondrial carry-over after nuclear transfer for In Vitro fertilization
Olivier Tytgat
MX Tang
Willem van Snippenberg
Annekatrien Boel
RR Guggilla
Yannick Gansemans
Michiel Van Herp
Sofie Symoens
Wim Trypsteen
Dieter Deforce
et al.
A1
Journal Article
in
CLINICAL CHEMISTRY
2021
Digital polymerase chain reaction for assessment of mutant mitochondrial carry-over after nuclear transfer for in vitro fertilization
Olivier Tytgat
Maoxing Tang
Willem van Snippenberg
Annekatrien Boel
Ramesh Reddy Guggilla
Yannick Gansemans
Michiel Van Herp
Sofie Symoens
Wim Trypsteen
Dieter Deforce
et al.
A1
Journal Article
in
CLINICAL CHEMISTRY
2021
Effect of overconditioning on the hepatic global gene expression pattern of dairy cows at the end of pregnancy
Osvaldo Américo Bogado Pascottini
Jenne De Koster
Filip Van Nieuwerburgh
Mario Van Poucke
Luc Peelman
Veerle Fievez
J. L. M. R. Leroy
Geert Opsomer
A1
Journal Article
in
JOURNAL OF DAIRY SCIENCE
2021
Effects of aleurone supplementation on glucose-insulin metabolism and gut microbiome in untrained healthy horses
Berit Boshuizen
Carmen Vidal Moreno de Vega
Lorie De Maré
Constance De meeûs
Jean Eduardo de Oliveira
Guilherme Hosotani
Yannick Gansemans
Dieter Deforce
Filip Van Nieuwerburgh
Catherine Delesalle
A1
Journal Article
in
FRONTIERS IN VETERINARY SCIENCE
2021
Endogenous suppression of WNT signalling in human embryonic stem cells leads to low differentiation propensity towards definitive endoderm
Dominika Dziedzicka
Mukul Tewary
Alexander Keller
Laurentijn Tilleman
Laura Prochazka
Joel Ostblom
Edouard Couvreu De Deckersberg
Christina Markouli
Silvie Franck
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2021
Enrichment of circulating trophoblasts from maternal blood using laminar microscale vortices
Ann-Sophie Vander Plaetsen
Jana Weymaere
Olivier Tytgat
Magali Buyle
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
PRENATAL DIAGNOSIS
2021
Genetic responses of metabolically active limnospira indica strain PCC 8005 exposed to gamma-radiation during its lifecycle
Anu Yadav
Laurens Maertens
Tim Meese
Filip Van Nieuwerburgh
Mohamed Mysara
Natalie Leys
Ann Cuypers
Paul Jaak Janssen
A1
Journal Article
in
MICROORGANISMS
2021
Genetics and epigenetics in clinical veterinary medicine : new approaches to deal with problems related to diagnostics and screening
Evelien Bogaerts
Bart Broeckx
Jimmy Saunders
Luc Peelman
Filip Van Nieuwerburgh
Dissertation
2021
HES1 and HES4 have non-redundant roles downstream of Notch during early human T-cell development
Matthias De Decker
Marieke Lavaert
Juliette Roels
Laurentijn Tilleman
Bart Vandekerckhove
Georges Leclercq
Filip Van Nieuwerburgh
Pieter Van Vlierberghe
Tom Taghon
A1
Journal Article
in
HAEMATOLOGICA
2021
Long non-coding RNAs as novel therapeutic targets in juvenile myelomonocytic leukemia
Mattias Hofmans
Tim Lammens
Barbara Depreter
Ying Wu
Miriam Erlacher
Aurélie Caye
Hélène Cavé
Christian Flotho
Valerie de Haas
Charlotte M. Niemeyer
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2021
MYCN-induced nucleolar stress drives an early senescence-like transcriptional program in hTERT-immortalized RPE cells
Sofia Zanotti
Suzanne Vanhauwaert
Christophe Van Neste
Volodimir Olexiouk
Jolien Van Laere
Marlies Verschuuren
Joni Van der Meulen
Liselot Mus
Kaat Durinck
Laurentijn Tilleman
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2021
Pharmacogenetics in clinical practice : current level of knowledge among Flemish physicians and pharmacists
Ahmed Edris Mohamed
Anna Vanoverschelde
Pranvera Bushaj
Filip Van Nieuwerburgh
Lies Lahousse
A1
Journal Article
in
PHARMACOGENOMICS JOURNAL
2021
Pre-weaning inulin supplementation alters the ileal transcriptome in pigs regarding lipid metabolism
Martine Schroyen
Bing Li
Ester Arevalo Sureda
Yuping Zhang
Julie Leblois
Dieter Deforce
Filip Van Nieuwerburgh
Jose Wavreille
Nadia Everaert
A1
Journal Article
in
VETERINARY SCIENCES
2021
Profiling the aerobic window (AW) of horses in response to training by means of a new LMS (lactate minimum speed) test : flatten the curve
Lorie De Maré
Berit Boshuizen
Carmen Vidal Moreno de Vega
Constance De meeûs
Lukas Plancke
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Jean de Oliveira
Catherine Delesalle
C3
Conference
2021
RUNX2 regulates leukemic cell metabolism and chemotaxis in high-risk T cell acute lymphoblastic leukemia
Filip Matthijssens
Nitesh D. Sharma
Monique Nysus
Christian K. Nickl
Huining Kang
Dominique R. Perez
Béatrice Lintermans
Wouter Van Loocke
Juliette Roels
Sofie Peirs
et al.
A1
Journal Article
in
JOURNAL OF CLINICAL INVESTIGATION
2021
Rare modifier variants alter the severity of cardiovascular disease in pseudoxanthoma elasticum : identification of novel candidate modifier genes and disease pathways through mixture of effects analysis
Eva De Vilder
Ludovic Martin
Georges Lefthériotis
Paul Coucke
Filip Van Nieuwerburgh
Olivier Vanakker
A1
Journal Article
in
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
2021
Recurrent chromosomal imbalances provide selective advantage to human embryonic stem cells under enhanced replicative stress conditions
Liselot Mus
Stéphane Van Haver
Mina Popovic
Wim Trypsteen
Steve Lefever
Nadja Zeltner
Yudelca Ogando
Eva Jacobs
Geertrui Denecker
Ellen Sanders
et al.
A1
Journal Article
in
GENES CHROMOSOMES & CANCER
2021
STRide probes : single-labeled short tandem repeat identification probes
Olivier Tytgat
Maarten Fauvart
Tim Stakenborg
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
BIOSENSORS & BIOELECTRONICS
2021
T-BET and EOMES accelerate and enhance functional differentiation of human natural killer cells
Laura Kiekens
Wouter Van Loocke
Sylvie Taveirne
Sigrid Wahlen
Eva Persyn
Els Van Ammel
Zenzi De Vos
Patrick Matthys
Filip Van Nieuwerburgh
Tom Taghon
et al.
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2021
TEAD4 regulates trophectoderm differentiation upstream of CDX2 in human preimplantation embryos
Panagiotis Stamatiadis
Annekatrien Boel
Gwenny Cosemans
Filip Van Nieuwerburgh
Björn Menten
Petra De Sutter
Dominic Stoop
S. M. Chuva de Sousa Lopes
F. Lluis
C3
Conference
2021
The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments
Stephanie De Vos
Stephane Rombauts
Louis Coussement
Wannes Dermauw
Marnik Vuylsteke
Patrick Sorgeloos
James S. Clegg
Ziro Nambu
Filip Van Nieuwerburgh
Parisa Norouzitallab
et al.
A1
Journal Article
in
BMC GENOMICS
2021
The impact of maternal and piglet low protein diet and their interaction on the porcine liver transcriptome around the time of weaning
Kikianne Kroeske
Ester Arévalo Sureda
Julie Uerlings
Dieter Deforce
Filip Van Nieuwerburgh
Marc Heyndrickx
Sam Millet
Nadia Everaert
Martine Schroyen
A1
Journal Article
in
VETERINARY SCIENCES
2021
Untangling the structural and molecular mechanisms underlying colour and rapid colour change in a lizard, Agama atra
Michaël Nicolaï
Liliana D'Alba Altamirano
Jonathan Goldenberg
Yannick Gansemans
Filip Van Nieuwerburgh
Susana Clusella‐Trullas
Matthew Shawkey
A1
Journal Article
in
MOLECULAR ECOLOGY
2021
2020
Adjuvanting allergen extracts for sublingual immunotherapy : calcitriol downregulates CXCL8 production in primary sublingual epithelial cells
Michael Pelst
Clara Hoebart
Charlotte Wallaeys
Hilde De Rooster
Yannick Gansemans
Filip Van Nieuwerburgh
Bert Devriendt
Eric Cox
A1
Journal Article
in
FRONTIERS IN IMMUNOLOGY
2020
Aging of preleukemic thymocytes drives CpG island hypermethylation in T-cell acute lymphoblastic leukemia
Juliette Roels
Morgan Thénoz
B Szarzyńska
M Landfors
Stien De Coninck
Lisa Demoen
Lien Provez
Anna Kuchmiy
Steven Strubbe
Lindy Reunes
et al.
A2
Journal Article
in
BLOOD CANCER DISCOVERY
2020
Comparative study of preimplantation development following distinct assisted oocyte activation protocols in a PLC-zeta knockout mouse model
Minerva Ferrer Buitrago
Laurentijn Tilleman
Vanessa Thys
A Hachem
Annekatrien Boel
Filip Van Nieuwerburgh
Dieter Deforce
Luc Leybaert
Petra De Sutter
J. Parrington
et al.
A1
Journal Article
in
MOLECULAR HUMAN REPRODUCTION
2020
Distinct and temporary-restricted epigenetic mechanisms regulate human αβ and γδ T cell development
Juliette Roels
Anna Kuchmiy
Matthias De Decker
Steven Strubbe
Marieke Lavaert
Kai Ling Liang
Georges Leclercq
Bart Vandekerckhove
Filip Van Nieuwerburgh
Pieter Van Vlierberghe
et al.
A1
Journal Article
in
NATURE IMMUNOLOGY
2020
Distinct transcriptome signatures of Helicobacter suis and Helicobacter heilmannii strains upon adherence to human gastric epithelial cells
Helena Berlamont
Chloë De Witte
Eva Bauwens
Hannah Min Jou
Richard Ducatelle
Ellen De Meester
Yannick Gansemans
Dieter Deforce
Filip Van Nieuwerburgh
Freddy Haesebrouck
et al.
A1
Journal Article
in
VETERINARY RESEARCH
2020
Does the mode of dispersion determine the properties of dispersed Pseudomonas aeruginosa biofilm cells?
Jasper Wille
Eline Teirlinck
Andrea Sass
Filip Van Nieuwerburgh
Volkhard Kaever
Kevin Braeckmans
Tom Coenye
A1
Journal Article
in
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
2020
Ecological divergence of wild strawberry DNA methylation patterns at distinct spatial scales
Hanne De Kort
Bart Panis
Dieter Deforce
Filip Van Nieuwerburgh
Ollivier Honnay
A1
Journal Article
in
MOLECULAR ECOLOGY
2020
Effect of oral aleurone supplementation on glucose and insulin dynamics of horses in training
Berit Boshuizen
Constance De meeûs
Lorie De Maré
Carmen Vidal Moreno de Vega
J De Oliveira
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Catherine Delesalle
C3
Conference
2020
Extracellular vesicles spread the RNA interference signal of Tribolium castaneum TcA cells
Lina Mingels
Niels Wynant
Dulce Santos
Paulien Peeters
Yannick Gansemans
Johan Billen
Filip Van Nieuwerburgh
Jozef Vanden Broeck
A1
Journal Article
in
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY
2020
First draft genome assembly of the desert locust, Schistocerca gregaria
Heleen Verlinden
Lieven Sterck
Jia Li
Zhen Li
Anna Yssel
Yannick Gansemans
Rik Verdonck
Michiel Holtof
Hojun Song
Spencer T. Behmer
et al.
A2
Journal Article
in
F1000RESEARCH
2020
Human thymic CD10+ PD-1+ intraepithelial lymphocyte precursors acquire interleukin-15 responsiveness at the CD1a– CD95+ CD28– CCR7– developmental stage
Lore Billiet
Glenn Goetgeluk
Sarah Bonte
Stijn De Munter
Laurenz De Cock
Melissa Pille
Joline Ingels
Hanne Jansen
Karin Weening
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2020
Kinship analysis on single cells after whole genome amplification
Jana Weymaere
Ann-Sophie Vander Plaetsen
Laurentijn Tilleman
Olivier Tytgat
Kaat Rubben
Sofie Geeraert
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2020
Maternal recognition of pregnancy in the horse : are MicroRNAs the secret messengers?
Katrien Smits
Yannick Gansemans
Laurentijn Tilleman
Filip Van Nieuwerburgh
Margot Van de Velde
Ilse Gerits
Cyrillus Ververs
Kim Roels
Jan Govaere
Luc Peelman
et al.
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2020
Murine induced pluripotent stem cell‐derived neuroimmune cell culture models emphasize opposite immune-effector functions of interleukin 13-primed microglia and macrophages in terms of neuroimmune toxicity
Alessandra Quarta
Tim Meese
Zoë Pieters
Elise Van Breedam
Debbie Le Blon
Jana Van Broeckhoven
Sven Hendrix
Herman Goossens
Niel Hens
Zwi Berneman
et al.
A1
Journal Article
in
GLIA
2020
Myeloid IRE1a deletion alters hepatic macrophage phenotype and attenuates experimental non-alcoholic steatohepatitis-related hepatocellular carcinoma
Sanne Van Campenhout
Laurentijn Tilleman
Sander Lefere
Astrid Vandierendonck
Anja Geerts
Xavier Verhelst
Filip Van Nieuwerburgh
Hans Van Vlierberghe
Lindsey Devisscher
C3
Conference
2020
Myeloid-specific IRE1alpha deletion reduces tumour development in a diabetic, non-alcoholic steatohepatitis-induced hepatocellular carcinoma mouse model
Sanne Van Campenhout
Laurentijn Tilleman
Sander Lefere
Aster Vandierendonck
Sarah Raevens
Xavier Verhelst
Anja Geerts
Filip Van Nieuwerburgh
Hans Van Vlierberghe
Lindsey Devisscher
A1
Journal Article
in
METABOLISM-CLINICAL AND EXPERIMENTAL
2020
Nanopore sequencing of a forensic STR multiplex reveals loci suitable for single-contributor STR profiling
Olivier Tytgat
Yannick Gansemans
Jana Weymaere
Kaat Rubben
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
GENES
2020
Pan-cancer pharmacogenetics : targeted sequencing panels or exome sequencing?
Laurentijn Tilleman
Björn Heindryckx
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
PHARMACOGENOMICS
2020
Spatio-temporal patterns in the gene expression of the calanoid copepod Temora longicornis in the Belgian part of the North Sea
Ilias Semmouri
Karel De Schamphelaere
Filip Van Nieuwerburgh
Dieter Deforce
Colin Janssen
Jana Asselman
A1
Journal Article
in
MARINE ENVIRONMENTAL RESEARCH
2020
The transcription factor ETS1 is an important regulator of human NK cell development and terminal differentiation
Sylvie Taveirne
Sigrid Wahlen
Wouter Van Loocke
Laura Kiekens
Eva Persyn
Els Van Ammel
Katrien De Mulder
Juliette Roels
Laurentijn Tilleman
Marc Aumercier
et al.
A1
Journal Article
in
BLOOD
2020
Validation of a new LMS (lactate minimum speed) exercise test for optimal assessment of the aerobic window of sport horses
Lorie De Maré
Berit Boshuizen
Constance De meeûs
Lukas Plancke
Carmen Vidal Moreno de Vega
Jean de Oliveira
Yannick Gansemans
Filip Van Nieuwerburgh
Dieter Deforce
Catherine Delesalle
C3
Conference
2020
Vapor nanobubble is the more reliable photothermal mechanism for inducing endosomal escape of siRNA without disturbing cell homeostasis
Juan Fraire
Gaëlle Houthaeve
Jing Liu
Laurens Raes
Lotte Vermeulen
Stephan Stremersch
Toon Brans
Gerardo Garcia-Diaz Barriga
Sarah De Keulenaer
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
JOURNAL OF CONTROLLED RELEASE
2020
2019
A multi-omics analysis of the grapevine pathogen Lasiodiplodia theobromae reveals that temperature affects the expression of virulence- and pathogenicity-related genes
Carina Felix
Rodrigo Silva Meneses
Micael F. M. Goncalves
Laurentijn Tilleman
Ana S. Duarte
Jesus V. Jorrin-Novo
Yves Van de Peer
Dieter Deforce
Filip Van Nieuwerburgh
Ana C. Esteves
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2019
Bovine embryo-secreted microRNA-30c is a potential non-invasive biomarker for hampered preimplantation developmental competence
Xiaoyuan Lin
Evy Beckers
Séan Mc Cafferty
Yannick Gansemans
Katarzyna Szymańska-Vandendriessche
Krishna Chaitanya Pavani
João Portela Catani
Filip Van Nieuwerburgh
Dieter Deforce
Petra De Sutter
et al.
A1
Journal Article
in
FRONTIERS IN GENETICS
2019
Comparative analysis of different nuclear transfer techniques to prevent the transmission of mitochondrial DNA variants
Maoxing Tang
Ramesh Reddy Guggilla
Yannick Gansemans
Margot Van der Jeught
Annekatrien Boel
Mina Popovic
Panagiotis Stamatiadis
Minerva Ferrer Buitrago
Vanessa Thys
Rudy Van Coster
et al.
A1
Journal Article
in
MOLECULAR HUMAN REPRODUCTION
2019
Comparative analysis of different nuclear transfer techniques to prevent the transmission of mitochondrial DNA variants
Maoxing Tang
R Reddy
Yannick Gansemans
Margot Van der Jeught
Annekatrien Boel
Panagiotis Stamatiadis
Rudy Van Coster
Dieter Deforce
Filip Van Nieuwerburgh
Petra De Sutter
et al.
C3
Conference
2019
Comparison of seven contemporary pharmacogenetic assays with the PharmGKB database
Laurentijn Tilleman
Dieter Deforce
Filip Van Nieuwerburgh
C3
Conference
2019
Contemporary pharmacogenetic assays in view of the PharmGKB database
Laurentijn Tilleman
Jana Weymaere
Björn Heindryckx
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
PHARMACOGENOMICS
2019
Dual RNA sequencing of Vitis vinifera during Lasiodiplodia theobromae infection unveils host-pathogen interactions
Micael FM Gonçalves
Rui B Nunes
Laurentijn Tilleman
Yves Van de Peer
Dieter Deforce
Filip Van Nieuwerburgh
Ana C Esteves
Artur Alves
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2019
Emended description of Gardnerella vaginalis and description of Gardnerella leopoldii sp. nov., Gardnerella piotii sp. nov. and Gardnerella swidsinskii sp. nov., with delineation of 13 genomic species within the genus Gardnerella
Mario Vaneechoutte
Alexandr Guschin
Leen Van Simaey
Yannick Gansemans
Filip Van Nieuwerburgh
Piet Cools
A1
Journal Article
in
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
2019
Feasibility of single-cell analysis of model cancer and foetal cells in blood after isolation by cell picking
Julie Smith
Andreas Frøslev Mathisen
Nadja Funch Richardt
Ann-Sophie Vander Plaetsen
Filip Van Nieuwerburgh
Henrik Stender
Thore Hillig
A2
Journal Article
in
TUMOR BIOLOGY
2019
Forensic lab-on-a-chip DNA analysis
Senne Cornelis
Dieter Deforce
Filip Van Nieuwerburgh
Liesbeth Lagae
Dissertation
2019
Forensic tri-allelic SNP genotyping using nanopore sequencing
Senne Cornelis
Yannick Gansemans
Ann-Sophie Vander Plaetsen
Jana Weymaere
Sander Willems
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2019
Gain of 20q11.21 in human pluripotent stem cells impairs TGF-β-dependent neuroectodermal commitment
C. Markouli
E. Couvreu De Deckersberg
M. Regin
H. T. Nguyen
F. Zambelli
A. Keller
D. Dziedzicka
J. De Kock
Laurentijn Tilleman
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
STEM CELL REPORTS
2019
Generation of virus- and dsRNA-derived siRNAs with species-dependent length in insects
Dulce Santos
Lina Mingels
Elise Vogel
Luoluo Wang
Olivier Christiaens
Kaat Cappelle
Niels Wynant
Yannick Gansemans
Filip Van Nieuwerburgh
Guy Smagghe
et al.
A1
Journal Article
in
VIRUSES-BASEL
2019
Genetic characterization and therapeutic targeting of MYC-rearranged T cell acute lymphoblastic leukaemia
Gloria Milani
Filip Matthijssens
Wouter Van Loocke
Kaat Durinck
Juliette Roels
Sofie Peirs
Morgan Thénoz
Tim Pieters
Lindy Reunes
Béatrice Lintermans
et al.
A1
Journal Article
in
BRITISH JOURNAL OF HAEMATOLOGY
2019
Genome-wide stress responses to copper and arsenic in a field population of Daphnia
Jana Asselman
Ilias Semmouri
Craig Jackson
Nathan R Keith
Filip Van Nieuwerburgh
Dieter Deforce
Joseph R Shaw
Karel De Schamphelaere
A1
Journal Article
in
ENVIRONMENTAL SCIENCE & TECHNOLOGY
2019
Honey bee predisposition of resistance to ubiquitous mite infestations
Bart Broeckx
Lina De Smet
Tjeerd Blacquière
Kevin Maebe
Mikalaï Khalenkow
Mario Van Poucke
Bjorn Dahle
Peter Neumann
Kim Bach Nguyen
Guy Smagghe
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2019
Increased primordial germ cell (PGC) specification from human embryonic stem cells (hESC) derived in Activin A
Swati Mishra
Margot Van der Jeught
Mina Popovic
Jasin Taelman
Evi Duthoo
Katarzyna Szymańska-Vandendriessche
Petra De Sutter
Laurentijn Tilleman
Filip Van Nieuwerburgh
Annekatrien Boel
et al.
C3
Conference
2019
Influence of microbiota in the susceptibility of parasitic wasps to abamectin insecticide : deep sequencing, esterase and toxicity tests
María del Mar Fernández
Ivan Meeus
Annelies Billiet
Filip Van Nieuwerburgh
Dieter Deforce
Peter Vandamme
Elisa Viñuela
Guy Smagghe
A1
Journal Article
in
PEST MANAGEMENT SCIENCE
2019
Large expert-curated database for benchmarking document similarity detection in biomedical literature search
Peter Brown
Aik-Choon Tan
Mohamed A. El-Esawi
Thomas Liehr
Oliver Blanck
Douglas P. Gladue
Gabriel M. F. Almeida
Tomislav Cernava
Carlos O. Sorzano
Andy W. K. Yeung
et al.
A1
Journal Article
in
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION
2019
Marine biogenics in sea spray : a new source of pharmaceuticals and nutritionals
Jana Asselman
Emmanuel Van Acker
Maarten De Rijcke
Laurentijn Tilleman
Filip Van Nieuwerburgh
Jan Mees
Karel De Schamphelaere
Colin Janssen
C3
Conference
2019
Marine biogenics in sea spray aerosols interact with the mTOR signaling pathway
Jana Asselman
Emmanuel Van Acker
Maarten De Rijcke
Laurentijn Tilleman
Filip Van Nieuwerburgh
Jan Mees
Karel De Schamphelaere
Colin Janssen
A1
Journal Article
in
SCIENTIFIC REPORTS
2019
Rejections in an non-purpose bred assistance dog population : reasons, consequences and methods for screening
Evelien Bogaerts
Christel Moons
Filip Van Nieuwerburgh
Luc Peelman
Jimmy Saunders
Bart Broeckx
A1
Journal Article
in
PLOS ONE
2019
Silicon µPCR chip for forensic STR profiling with hybeacon probe melting curves
Senne Cornelis
Olivier Tytgat
Maarten Fauvart
Yannick Gansemans
Ann-Sophie Vander Plaetsen
Rodrigo S Wiederkehr
Dieter Deforce
Filip Van Nieuwerburgh
Tim Stakenborg
A1
Journal Article
in
SCIENTIFIC REPORTS
2019
Small RNA NcS27 co-regulates utilization of carbon sources in Burkholderia cenocepacia J2315
Andrea Sass
Stijn De Waele
Simon Daled
Bart Devreese
Dieter Deforce
Filip Van Nieuwerburgh
Tom Coenye
A1
Journal Article
in
MICROBIOLOGY-SGM
2019
The inflammasome pathway is involved in PXE through IL1B upregulation in patients with a severe cardiovascular PXE phenotype
Eva De Vilder
L. Martin
G. Leftheriotis
Paul Coucke
Anne De Paepe
Filip Van Nieuwerburgh
Olivier Vanakker
C3
Conference
2019
The transcriptome of the marine calanoid copepod Temora longicornis under heat stress and recovery
Ilias Semmouri
Jana Asselman
Filip Van Nieuwerburgh
Dieter Deforce
Colin Janssen
Karel De Schamphelaere
A1
Journal Article
in
MARINE ENVIRONMENTAL RESEARCH
2019
Transgenerational inheritance of DNA hypomethylation in Daphnia magna in response to salinity stress
Guilherme Jeremias
João Alves Barbosa
Sérgio Marques
Karel De Schamphelaere
Filip Van Nieuwerburgh
Dieter Deforce
Fernando Gonçalves
Joana Pereira
Jana Asselman
C3
Conference
2019
Truncating SLC12A6 variants cause different clinical phenotypes in humans and dogs
Mario Van Poucke
Kimberley Stee
Laurien Sonck
Emmelie Stock
Leslie Bosseler
Jo Van Dorpe
Filip Van Nieuwerburgh
Dieter Deforce
Luc Peelman
Luc Van Ham
et al.
A1
Journal Article
in
EUROPEAN JOURNAL OF HUMAN GENETICS
2019
Uncovering low-level mosaicism in human embryonic stem cells using high throughput single cell shallow sequencing
Alexander Keller
Laurentijn Tilleman
Dominika Dziedzicka
Filippo Zambelli
Karen Sermon
Filip Van Nieuwerburgh
Claudia Spits
Mieke Geens
A1
Journal Article
in
SCIENTIFIC REPORTS
2019
Various Evolutionary Trajectories Lead to Loss of the Tobramycin-Potentiating Activity of the Quorum-Sensing Inhibitor Baicalin Hydrate in Burkholderia cenocepacia Biofilms
Andrea Sass
Lisa Slachmuylders
Heleen Van Acker
Ian Vandenbussche
Lisa Ostyn
Mona Bové
Aurélie Crabbé
Laurent R Chiarelli
Silvia Buroni
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
2019
WNT inhibition and increased fibroblast growth factor signaling promotes derivation of less heterogeneous primed human embryonic stem cells, compatible with differentiation
Jasin Taelman
Mina Popovic
Monika Bialecka
Laurentijn Tilleman
Sharat Warrier
Margot Van der Jeught
Björn Menten
Dieter Deforce
Petra De Sutter
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
STEM CELLS AND DEVELOPMENT
2019
YtrA(Sa), a GntR-family transcription factor, represses two genetic loci encoding membrane proteins in Sulfolobus acidocaldarius
Liesbeth Lemmens
Laurentijn Tilleman
Ezra De Koning
Karin Valegard
Ann-Christin Lindas
Filip Van Nieuwerburgh
Dominique Maes
Eveline Peeters
A1
Journal Article
in
FRONTIERS IN MICROBIOLOGY
2019
2018
A different gut microbial community between larvae and adults of a wild bumblebee nest (Bombus pascuorum)
Anneleen Parmentier
Ivan Meeus
Filip Van Nieuwerburgh
Dieter Deforce
Peter Vandamme
Guy Smagghe
A1
Journal Article
in
INSECT SCIENCE
2018
A prokaryotic-eukaryotic relation in the fat body of Bombus terrestris
Anneleen Parmentier
Annelies Billiet
Guy Smagghe
Peter Vandamme
Dieter Deforce
Filip Van Nieuwerburgh
Ivan Meeus
A1
Journal Article
in
ENVIRONMENTAL MICROBIOLOGY REPORTS
2018
Analysis of shared heritability in common disorders of the brain
Verneri Anttila
Brendan Bulik-Sullivan
Hilary K Finucane
Raymond K Walters
Jose Bras
Laramie Duncan
Valentina Escott-Price
Guido J Falcone
Padhraig Gormley
Rainer Malik
et al.
A1
Journal Article
in
SCIENCE
2018
Chromosomal mosaicism in human blastocysts : the ultimate challenge of preimplantation genetic testing?
Mina Popovic
Annelies Dheedene
CHRISTODOULOS CHRISTODOULOU
Jasin Taelman
Lien Dhaenens
Filip Van Nieuwerburgh
Dieter Deforce
Etienne Van den Abbeel
Petra De Sutter
Björn Menten
et al.
A1
Journal Article
in
HUMAN REPRODUCTION
2018
Comparative analysis of naive, primed and ground state pluripotency in mouse embryonic stem cells originating from the same genetic background
Sabitri Ghimire
Margot Van der Jeught
Jitesh Neupane
Matthias S Roost
Jasper Anckaert
Mina Popovic
Filip Van Nieuwerburgh
Pieter Mestdagh
Jo Vandesompele
Dieter Deforce
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
Coumarin reduces virulence and biofilm formation in Pseudomonas aeruginosa by affecting quorum sensing, type III secretion and C-di-GMP levels
Yunhui Zhang
Andrea Sass
Heleen Van Acker
Jasper Wille
Bruno Verhasselt
Filip Van Nieuwerburgh
Volkhard Kaever
Aurélie Crabbé
Tom Coenye
A1
Journal Article
in
FRONTIERS IN MICROBIOLOGY
2018
Crossing borders to mitigate mycotoxins : where microbiology, poly-omics and crop protection meet
Laura De Mets
Leen De Gelder
Filip Van Nieuwerburgh
Kris Audenaert
C3
Conference
2018
Decreased susceptibility of Streptococcus anginosus to vancomycin in a multispecies biofilm is due to increased thickness of the cell wall
Sarah Tavernier
Andrea Sass
Michiel De Bruyne
Femke Baeke
Riet De Rycke
Aurélie Crabbé
Ilse Vandecandelaere
Filip Van Nieuwerburgh
Tom Coenye
A1
Journal Article
in
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
2018
Effect of β-adrenergic receptor agents on cardiac structure and function and whole-body gene expression in Daphnia magna
Tae-Yong Jeong
Jana Asselman
Karel De Schamphelaere
Filip Van Nieuwerburgh
Dieter Deforce
Sang Don Kim
A1
Journal Article
in
ENVIRONMENTAL POLLUTION
2018
Elucidation of the mechanism behind the potentiating activity of baicalin against Burkholderia cenocepacia biofilms
Lisa Slachmuylders
Heleen Van Acker
Gilles Brackman
Andrea Sass
Filip Van Nieuwerburgh
Tom Coenye
A1
Journal Article
in
PLOS ONE
2018
Intraobserver and interobserver agreement on the radiographical diagnosis of canine cranial cruciate ligament rupture
Evelien Bogaerts
Elke Van der Vekens
Geert Verhoeven
Hilde De Rooster
Bernadette Van Ryssen
Yves Samoy
Ingrid Putcuyps
Johan Van Tilburg
Nausikaa Devriendt
Frederik Weekers
et al.
A1
Journal Article
in
VETERINARY RECORD
2018
Massively parallel sequencing of micro-manipulated cells targeting a comprehensive panel of disease-causing genes : a comparative evaluation of upstream whole-genome amplification methods
Lieselot Deleye
Yannick Gansemans
Dieter De Coninck
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
PLOS ONE
2018
Microbial degradation of zearalenone by Actinobacteria : mind the toxicity
Laura De Mets
Kris Audenaert
Marthe De Boevre
Arnau Vidal Corominas
Filip Van Nieuwerburgh
Leen De Gelder
C3
Conference
2018
Multiplex STR amplification sensitivity in a silicon microchip
Senne Cornelis
Maarten Fauvart
Yannick Gansemans
Ann-Sophie Vander Plaetsen
Frederik Colle
Rodrigo S Wiederkehr
Dieter Deforce
Tim Stakenborg
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
PLCz knock-out sperm reveals the sole effect of altering calcium signals during assisted oocyte activation on later mouse embryogenesis
Minerva Ferrer Buitrago
Laurentijn Tilleman
Vanessa Thys
A Hachem
Filip Van Nieuwerburgh
Luc Leybaert
Petra De Sutter
Dieter Deforce
J Parrington
Björn Heindryckx
C3
Conference
2018
Photothermally triggered endosomal escape and its influence on transfection efficiency of gold-functionalized JetPEI/pDNA nanoparticles
Lotte Vermeulen
Juan Fraire
Laurens Raes
Ellen De Meester
Sarah De Keulenaer
Filip Van Nieuwerburgh
Stefaan De Smedt
Katrien Remaut
Kevin Braeckmans
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2018
Positive human health effects of sea spray aerosols : molecular evidence from exposed lung cell lines
Jana Asselman
Emmanuel Van Acker
Maarten De Rijcke
Laurentijn Tilleman
Filip Van Nieuwerburgh
Jan Mees
Karel De Schamphelaere
Colin Janssen
Preprint
2018
Pre-clinical evaluation of second generation PIM inhibitors for the treatment of T-cell acute lymphoblastic leukemia and lymphoma
Renate De Smedt
Sofie Peirs
Julie Morscio
Filip Matthijssens
Juliette Roels
Lindy Reunes
Béatrice Lintermans
Steven Goossens
Tim Lammens
Nadine Van Roy
et al.
A1
Journal Article
in
HAEMATOLOGICA
2018
Proteins involved in embryo-maternal interaction around the signalling of maternal recognition of pregnancy in the horse
Katrien Smits
Sander Willems
Katleen Van Steendam
Margot Van de Velde
Valérie De Lange
Cyrillus Ververs
Kim Roels
Jan Govaere
Filip Van Nieuwerburgh
Luc Peelman
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
Short tandem repeat analysis after whole genome amplification of single B-lymphoblastoid cells
Lieselot Deleye
Ann-Sophie Vander Plaetsen
Jana Weymaere
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
TBX2 is a neuroblastoma core regulatory circuitry component enhancing MYCN/FOXM1 reactivation of DREAM targets
Bieke Decaesteker
Geertrui Denecker
Christophe Van Neste
Emmy M Dolman
Wouter Van Loocke
Moritz Gartlgruber
Carolina de Carvalho Nunes
Fanny De Vloed
Pauline Depuydt
Karen Verboom
et al.
A1
Journal Article
in
NATURE COMMUNICATIONS
2018
The Chara genome : secondary complexity and implications for plant terrestrialization
Tomoaki Nishiyama
Hidetoshi Sakayama
Jan de Vries
Henrik Buschmann
Denis Saint-Marcoux
Kristian K Ullrich
Fabian B Haas
Lisa Vanderstraeten
Dirk Becker
Daniel Lang
et al.
A1
Journal Article
in
CELL
2018
The molecular basis for positive health effects of sea spray on human lung cells
Jana Asselman
Emmanuel Van Acker
Maarten De Rijcke
Laurentijn Tilleman
Filip Van Nieuwerburgh
Jan Mees
Karel De Schamphelaere
Colin Janssen
C3
Conference
2018
The presence of extracellular microRNAs in the media of cultured Drosophila cells
Stijn Van den Brande
Marijke Gijbels
Niels Wynant
Dulce Santos
Lina Mingels
Yannick Gansemans
Filip Van Nieuwerburgh
Jozef Vanden Broeck
A1
Journal Article
in
SCIENTIFIC REPORTS
2018
The small RNA ncS35 regulates growth in Burkholderia cenocepacia J2315
Sanne Kiekens
Andrea Sass
Filip Van Nieuwerburgh
Dieter Deforce
Tom Coenye
A1
Journal Article
in
MSPHERE
2018
Transcriptional landscape changes during human embryonic stem cell derivation
Sharat Warrier
Jasin Taelman
Laurentijn Tilleman
Margot Van der Jeught
Galbha Duggal
Sylvie Lierman
Mina Popovic
Ann Van Soom
Luc Peelman
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
MOLECULAR HUMAN REPRODUCTION
2018
Transgenerational inheritance of DNA hypomethylation in Daphnia magna in response to salinity stress
Guilherme Jeremias
João Barbosa
Sergio Marques
Karel De Schamphelaere
Filip Van Nieuwerburgh
Dieter Deforce
Fernando Gonçalves
Joana Pereira
Jana Asselman
A1
Journal Article
in
ENVIRONMENTAL SCIENCE & TECHNOLOGY
2018
Unravelling the molecular pathways responsible for sex determination in humans
Jasin Taelman
Mina Popovic
Laurentijn Tilleman
Margot Van der Jeught
Dieter Deforce
Petra De Sutter
Filip Van Nieuwerburgh
Björn Heindryckx
S Chuva De Sousa Lopes
C3
Conference
2018
2017
Characterization of the emerging zoonotic pathogen Arcobacter thereius by whole genome sequencing and comparative genomics
Francesca Rovetto
Aurélien Carlier
Anne-Marie Van den Abeele
Koen Illeghems
Filip Van Nieuwerburgh
Luca Cocolin
Kurt Houf
A1
Journal Article
in
PLOS ONE
2017
Colony contact contributes to the diversity of gut bacteria in bumblebees (Bombus terrestris)
Annelies Billiet
Ivan Meeus
Filip Van Nieuwerburgh
Dieter Deforce
Felix Wäckers
Guy Smagghe
A1
Journal Article
in
INSECT SCIENCE
2017
Comprehensive comparison of inner cell mass and trophectoderm reveals the complex nature of chromosomal mosaicism in human embryos
Mina Popovic
Annelies Dheedene
CHRISTODOULOS CHRISTODOULOU
Margot Van der Jeught
Filip Van Nieuwerburgh
Dieter Deforce
Petra De Sutter
Etienne Van den Abbeel
Björn Menten
Björn Heindryckx
C3
Conference
2017
Direct comparison of distinct naive pluripotent states in human embryonic stem cells
Sharat Warrier
Margot Van der Jeught
Galbha Duggal
Laurentijn Tilleman
Ella Sutherland
Jasin Taelman
Mina Popovic
Sylvie Lierman
Susana Marina Chuva de Sousa Lopes
Ann Van Soom
et al.
A1
Journal Article
in
NATURE COMMUNICATIONS
2017
Discovery of the leinamycin family of natural products by mining actinobacterial genomes
Guohui Pan
Zhengren Xu
Zhikai Guo
Hindra Hindra
Ming Ma
Dong Yang
Hao Zhou
Yannick Gansemans
Xiangcheng Zhu
Yong Huang
et al.
A1
Journal Article
in
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
2017
Effect of aleurone on equine fecal microbiome and glucose metabolism in non-training horses
Berit Boshuizen
Constance De meeûs
Filip Van Nieuwerburgh
Dieter Deforce
Jean de Oliviera
Laura Van Hauwe
Catherine Delesalle
C3
Conference
2017
Epigenetic sampling effects : nephrectomy modifies the clear cell renal cell cancer methylome
Christophe Van Neste
Alexander Laird
Fiach O’Mahony
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
Thomas Powles
David J Harrison
Grant D Stewart
Tim De Meyer
A1
Journal Article
in
CELLULAR ONCOLOGY
2017
Flagging false positives following untargeted LCMS characterization of histone PTM combinations
Sander Willems
Maarten Dhaenens
Elisabeth Govaert
Laura De Clerck
Paulien Meert
Christophe Van Neste
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2017
Forensic SNP genotyping using nanopore MinION sequencing
Senne Cornelis
Yannick Gansemans
Lieselot Deleye
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2017
Massively parallel sequencing in preimplantation and prenatal genetic diagnosis
Lieselot Deleye
Filip Van Nieuwerburgh
Dieter Deforce
Dissertation
2017
Metabolic activity, urease production, antibiotic resistance and virulence in dual species biofilms of Staphylococcus epidermidis and Staphylococcus aureus
Ilse Vandecandelaere
Filip Van Nieuwerburgh
Dieter Deforce
Tom Coenye
A1
Journal Article
in
PLOS ONE
2017
Microbial community profiling of fresh basil and pitfalls in taxonomic assignment of enterobacterial pathogenic species based upon 16S rRNA
Siele Ceuppens
Dieter De Coninck
Nadine Bottledoorn
Filip Van Nieuwerburgh
Mieke Uyttendaele
A1
Journal Article
in
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
2017
Oncogenic ZEB2 activation drives sensitivity toward KDM1A inhibition in T-cell acute lymphoblastic leukemia
Steven Goossens
Sofie Peirs
Wouter Van Loocke
Jueqiong Wang
Mina Takawy
Filip Matthijssens
Stefan E Sonderegger
Katharina Haigh
Thao Nguyen
Niels Vandamme
et al.
A1
Journal Article
in
BLOOD
2017
Origins of human embryonic stem cell fate : role of the post inner cell mass intermediate
Sharat Warrier
Mina Popovic
Jasin Taelman
Laurentijn Tilleman
Sylvie Lierman
Minerva Ferrer Buitrago
S. Chuva De Sousa Lopes
Ann Van Soom
Luc Peelman
Filip Van Nieuwerburgh
et al.
C3
Conference
2017
Performance of four modern whole genome amplification methods for copy number variant detection in single cells
Lieselot Deleye
Laurentijn Tilleman
Ann-Sophie Vander Plaetsen
Senne Cornelis
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2017
Preimplantation genetic diagnosis for chromosomal rearrangements with the use of array comparative genomic hybridization at the blastocyst stage
CHRISTODOULOS CHRISTODOULOU
Annelies Dheedene
Björn Heindryckx
Filip Van Nieuwerburgh
Dieter Deforce
Petra De Sutter
Björn Menten
Etienne Van den Abbeel
A1
Journal Article
in
FERTILITY AND STERILITY
2017
RMNE calculation in forensic profiles with a high number of loci and allelic drop-outs using polynomial expansion
Sander Willems
Senne Cornelis
Yannick Gansemans
Bart Broeckx
Dieter De Coninck
Christophe Van Neste
Maarten Dhaenens
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2017
STR profiling and Copy Number Variation analysis on single, preserved cells using current Whole Genome Amplification methods
Ann-Sophie Vander Plaetsen
Lieselot Deleye
Senne Cornelis
Laurentijn Tilleman
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
SCIENTIFIC REPORTS
2017
The transcriptome of Mycobacterium tuberculosis in a lipid-rich dormancy model through RNAseq analysis
Diana Aguilar-Ayala
Laurentijn Tilleman
Filip Van Nieuwerburgh
Dieter Deforce
Juan Carlos Palomino
Peter Vandamme
Jorge A Gonzalez-Y-Merchand
Anandi Martin
A1
Journal Article
in
SCIENTIFIC REPORTS
2017
Unraveling the zearalenone degradation pathway using a poly-omics approach : first results
Laura De Mets
Kris Audenaert
Arnau Vidal Corominas
Filip Van Nieuwerburgh
Leen De Gelder
C3
Conference
2017
Wnt inhibition during hESC culture provides an improved pluripotent state starting point for directed differentiation
Jasin Taelman
Laurentijn Tilleman
Filip Van Nieuwerburgh
Sharat Warrier
Mina Popovic
Margot Van der Jeught
Dieter Deforce
Petra De Sutter
Björn Heindryckx
Susana Marina Chuva de Sousa Lopes
C3
Conference
2017
2016
Assessing the impact of minimizing arginine conversion in fully defined SILAC culture medium in human embryonic stem cells
Ellen Scheerlinck
Katleen Van Steendam
Simon Daled
Elisabeth Govaert
Liesbeth Vossaert
Paulien Meert
Filip Van Nieuwerburgh
Ann Van Soom
Luc Peelman
Petra De Sutter
et al.
A1
Journal Article
in
PROTEOMICS
2016
Divergence between the highly virulent zoonotic pathogen Helicobacter heilmannii and its closest relative, the low-virulence 'Helicobacter ailurogastricus' sp. nov.
Myrthe Joosten
Sara Lindén
Mirko Rossi
Alfred Chin Yen Tay
Emma Skoog
Médea Padra
Fanny Peters
Tim Perkins
Peter Vandamme
Filip Van Nieuwerburgh
et al.
A1
Journal Article
in
INFECTION AND IMMUNITY
2016
Dynamic epigenetic changes to VHL occur with sunitinib in metastatic clear cell renal cancer
Grant D Stewart
Thomas Powles
Christophe Van Neste
Alison Meynert
Fiach O'Mahony
Alexander Laird
Dieter Deforce
Filip Van Nieuwerburgh
Geert Trooskens
Wim Van Criekinge
et al.
A1
Journal Article
in
ONCOTARGET
2016
Forensic Loci Allele Database (FLAD) : automatically generated, permanent identifiers for sequenced forensic alleles
Christophe Van Neste
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2016
Impact of sugar syrup and pollen diet on the bacterial diversity in the gut of indoor-reared bumblebees (Bombus terrestris)
Annelies Billiet
Ivan Meeus
Filip Van Nieuwerburgh
Dieter Deforce
Felix Wäckers
Guy Smagghe
A1
Journal Article
in
APIDOLOGIE
2016
In vivo study of Dicer-2-mediated immune response of the small interfering RNA pathway upon systemic infections of virulent and avirulent viruses in Bombus terrestris
Jinzhi Niu
Guy Smagghe
Dieter De Coninck
Filip Van Nieuwerburgh
Dieter Deforce
Ivan Meeus
A1
Journal Article
in
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY
2016
Massive parallel sequencing uncovers chromosomal mosaicism in human embryonic stem cells in both primed and naive culture conditions
Mina Popovic
Margot Van der Jeught
Franki Speleman
Filip Van Nieuwerburgh
Petra De Sutter
Björn Menten
Björn Heindryckx
C3
Conference
2016
Microbial diversity and metabolite composition of Belgian red-brown acidic ales
Isabel Snauwaert
Sanne Roels
Filip Van Nieuwerburgh
Anita Van Landschoot
Luc De Vuyst
Peter Vandamme
A1
Journal Article
in
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
2016
Performance of a TthPrimPol-based whole genome amplification kit for copy number alteration detection using massively parallel sequencing
Lieselot Deleye
Dieter De Coninck
Annelies Dheedene
Petra De Sutter
Björn Menten
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
SCIENTIFIC REPORTS
2016
Preimplantation genetic diagnosis (PGD) for translocation carriers using whole genome screening by microarray analysis at the blastocyst stage
CHRISTODOULOS CHRISTODOULOU
Annelies Dheedene
Ilse De Croo
Björn Heindryckx
Lieselot Deleye
Filip Van Nieuwerburgh
Dieter Deforce
Petra De Sutter
Björn Menten
Etienne Van den Abbeel
C3
Conference
2016
Statistical framework for detection of genetically modified organisms based on Next Generation Sequencing
Sander Willems
Marie-Alice Fraiture
Dieter Deforce
Sigrid De Keersmaecker
Philippe Herman
Marc De Loose
Tom Ruttink
Filip Van Nieuwerburgh
Nancy Roosens
A1
Journal Article
in
FOOD CHEMISTRY
2016
Strain prioritization and genome mining for enediyne natural products
Xiaohui Yan
Huiming Ge
Tingting Huang
Dong Yang
Qihui Teng
Ivana Crnovčić
Xiuling Li
Jeffrey D Rudolf
Jeremy R Lohman
Yannick Gansemans
et al.
A1
Journal Article
in
MBIO
2016
Suboptimal culture conditions induce more deviations in gene expression in male than female bovine blastocysts
Sonia Heras Garcia
Dieter De Coninck
Mario Van Poucke
Karen Goossens
Osvaldo Américo Bogado Pascottini
Filip Van Nieuwerburgh
Dieter Deforce
Petra De Sutter
Jo Leroy
Alfonso Gutierrez-Adan
et al.
A1
Journal Article
in
BMC GENOMICS
2016
The equine embryo influences immune related gene expression in the oviduct
Katrien Smits
Dieter De Coninck
Filip Van Nieuwerburgh
Jan Govaere
Mario Van Poucke
Luc Peelman
Dieter Deforce
Ann Van Soom
A1
Journal Article
in
BIOLOGY OF REPRODUCTION
2016
The quorum sensing inhibitor hamamelitannin increases antibiotic susceptibility of Staphylococcus aureus biofilms by affecting peptidoglycan biosynthesis and eDNA release
Gilles Brackman
Koen Breyne
Riet De Rycke
Arno Vermote
Filip Van Nieuwerburgh
Evelyne Meyer
Serge Van Calenbergh
Tom Coenye
A1
Journal Article
in
SCIENTIFIC REPORTS
2016
Toward the most ideal case-control design with related and unrelated dogs in whole-exome sequencing studies
Bart Broeckx
Frank Coopman
Geert Verhoeven
Sarah De Keulenaer
Ellen De Meester
Valérie Bavegems
Pascale Smets
Bernadette Van Ryssen
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
ANIMAL GENETICS
2016
Uncovering the novel role of mTORC2 subunit of the PI3K/AKT/mTORC pathway in establishing naive pluripotency in human embryonic stem cells
Sharat Warrier
Margot Van der Jeught
Galbha Duggal
Jasin Taelman
Sylvie Lierman
Susana Marina Chuva de Sousa Lopes
Ann Van Soom
Luc Peelman
Filip Van Nieuwerburgh
Dieter De Coninck
et al.
C3
Conference
2016
Unique long non-coding RNA expression signature in ETV6/RUNX1-Driven B-cell precursor acute lymphoblastic leukemia
Farzaneh Ghazavi
Barbara De Moerloose
Wouter Van Loocke
Annelynn Wallaert
Alina Ferster
Marleen Bakkus
Geneviève Plat
Eric Delabesse
Anne Uyttebroeck
Filip Van Nieuwerburgh
et al.
C3
Conference
2016
Unique long non-coding RNA expression signature in ETV6/RUNX1-driven B-cell precursor acute lymphoblastic leukemia
Farzaneh Ghazavi
Barbara De Moerloose
Wouter Van Loocke
Annelynn Wallaert
Hetty Helsmoortel
Alina Ferster
Marleen Bakkus
Geneviève Plat
Eric Delabesse
Anne Uyttebroeck
et al.
A1
Journal Article
in
ONCOTARGET
2016
2015
16S rRNA Amplicon sequencing demonstrates that indoor-reared bumblebees (Bombus terrestris) harbor a core subset of bacteria normally associated with the wild host
Ivan Meeus
Laurian Parmentier
Annelies Billiet
Kevin Maebe
Filip Van Nieuwerburgh
Dieter Deforce
Felix Wäckers
Peter Vandamme
Guy Smagghe
A1
Journal Article
in
PLOS ONE
2015
A doubling of microphytobenthos biomass coincides with a tenfold increase in denitrifier and total bacterial abundances in intertidal sediments of a temperate estuary
Helen Decleyre
Kim Heylen
Koen Sabbe
Bjorn Tytgat
Dieter Deforce
Filip Van Nieuwerburgh
Carl Van Colen
Anne Willems
A1
Journal Article
in
PLOS ONE
2015
An heuristic filtering tool to identify phenotype-associated genetic variants applied to human intellectual disability and canine coat colors
Bart Broeckx
Frank Coopman
Geert Verhoeven
Tim Bosmans
Ingrid Gielen
Walter Dingemanse
Jimmy Saunders
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
BMC BIOINFORMATICS
2015
Canine whole exome sequencing : hip, hip, hurray?: the quest for genetic solutions for phenotypical problems
Bart Broeckx
Dieter Deforce
Frank Coopman
Geert Verhoeven
Filip Van Nieuwerburgh
Dissertation
2015
Challenges and opportunities in the investigation of unexplained intellectual disability using family-based whole-exome sequencing
C Helsmoortel
G Vandeweyer
P Ordoukhanian
Filip Van Nieuwerburgh
N Van der Aa
RF Kooy
A1
Journal Article
in
CLINICAL GENETICS
2015
Comparative analysis of different culture conditions inducing naive pluripotency in human embryonic stem cells
Sharat Warrier
Galbha Duggal
Jasin Taelman
Sylvie Lierman
S Chuva de Sousa Lopes
Ann Van Soom
Luc Peelman
Filip Van Nieuwerburgh
Dieter De Coninck
Björn Menten
et al.
C3
Conference
2015
Derivation conditions affect pluripotency and differentiation propensity of mouse embryonic stem cells
Sabitri Ghimire
Margot Van der Jeught
Jitesh Neupane
Filip Van Nieuwerburgh
Dieter Deforce
Susana Marina Chuva de Sousa Lopes
Petra De Sutter
Björn Heindryckx
C3
Conference
2015
Differential transcriptome analysis of the common shrimp Crangon crangon: special focus on the nuclear receptors and RNAi-related genes
Olivier Christiaens
Daan Delbare
Christophe Van Neste
Na Yu
Ruben De Wilde
Filip Van Nieuwerburgh
Dieter Deforce
Kris Cooreman
Guy Smagghe
A1
Journal Article
in
GENERAL AND COMPARATIVE ENDOCRINOLOGY
2015
Effect of multiple allelic drop-outs in forensic RMNE calculations
Christophe Van Neste
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2015
Efficiency of exome sequencing for the molecular diagnosis of Pseudoxanthoma Elasticum
Mohammad Jakir Hosen
Filip Van Nieuwerburgh
Wouter Steyaert
Dieter Deforce
Ludovic Martin
Georges Leftheriotis
Anne De Paepe
Paul Coucke
Olivier Vanakker
A1
Journal Article
in
JOURNAL OF INVESTIGATIVE DERMATOLOGY
2015
Forensic massively parallel sequencing data analysis tool: implementation of MyFLq as a standalone web- and Illumina BaseSpace®-application
Christophe Van Neste
Yannick Gansemans
Dieter De Coninck
David Van Hoofstat
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2015
Genome sequence of Devriesea agamarum, isolated from agamid lizards with dermatitis
Roel Haesendonck
Filip Van Nieuwerburgh
Freddy Haesebrouck
Dieter Deforce
Frank Pasmans
An Martel
A2
Journal Article
in
MICROBIOLOGY RESOURCE ANNOUNCEMENTS
2015
Genome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315
Andrea Sass
Heleen Van Acker
Konrad Förstner
Filip Van Nieuwerburgh
Dieter Deforce
Jörg Vogel
Tom Coenye
A1
Journal Article
in
BMC GENOMICS
2015
Heuristic filtering of sequencing variants with the R-package "Mendelian"
Bart Broeckx
Frank Coopman
Geert Verhoeven
Dieter Deforce
Filip Van Nieuwerburgh
C3
Conference
2015
Improved canine exome designs, featuring ncRNAs and increased coverage of protein coding genes
Bart Broeckx
Christophe Hitte
Frank Coopman
Geert Verhoeven
Sarah De Keulenaer
Ellen De Meester
Thomas Derrien
Jessica Alfoldi
Kerstin Lindblad-Toh
Tim Bosmans
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2015
Novel phenotypes and genes in pseudoxanthoma elasticum-related soft tissue mineralization: results of an integrative approach
eva De Vilder
Mohammad Jakir Hosen
Paul Coucke
Anne De Paepe
Ariana Kariminejad
Georges Lefthériotis
Filip Van Nieuwerburgh
Ludovic Martin
Olivier Vanakker
C3
Conference
2015
OSC2 and CYP716A14v2 catalyze the biosynthesis of triterpenoids for the cuticle of aerial organs of Artemisia annua
Tessa Moses
Jacob Pollier
Qian Shen
Sandra Soetaert
James Reed
Marie-Laure Erffelinck
Filip Van Nieuwerburgh
Robin Vanden Bossche
Anne Osbourn
Johan M Thevelein
et al.
A1
Journal Article
in
PLANT CELL
2015
Phospho-iTRAQ : assessing isobaric labels for the large-scale study of phosphopeptide stoichiometry
Pieter Glibert
Paulien Meert
Katleen Van Steendam
Filip Van Nieuwerburgh
Dieter De Coninck
Lennart Martens
Maarten Dhaenens
Dieter Deforce
A1
Journal Article
in
JOURNAL OF PROTEOME RESEARCH
2015
Porting forensic DNA analysis to deep sequencing
Christophe Van Neste
Dieter Deforce
Wim Van Criekinge
Filip Van Nieuwerburgh
Dissertation
2015
Prevalence of gender nonconformity in Flanders, Belgium
Eva Van Caenegem
Katrien Wierckx
Els Elaut
Ann Buysse
Alexis Dewaele
Filip Van Nieuwerburgh
Griet De Cuypere
Guy T'Sjoen
A1
Journal Article
in
ARCHIVES OF SEXUAL BEHAVIOR
2015
Shallow whole genome sequencing is well suited for the detection of chromosomal aberrations in human blastocysts
Lieselot Deleye
Annelies Dheedene
Dieter De Coninck
Tom Sante
CHRISTODOULOS CHRISTODOULOU
Björn Heindryckx
Etienne Van den Abbeel
Petra De Sutter
Dieter Deforce
Björn Menten
et al.
A1
Journal Article
in
FERTILITY AND STERILITY
2015
Transcriptome analysis of Bombyx mori larval midgut during persistent and pathogenic cytoplasmic polyhedrosis virus infection
Anna Kolliopoulou
Filip Van Nieuwerburgh
Dimitrios J Stravopodis
Dieter Deforce
Luc Swevers
Guy Smagghe
A1
Journal Article
in
PLOS ONE
2015
Validation of a sensitive DNA walking strategy to characterise unauthorised GMOs using model food matrices mimicking common rice products
Marie-Alice Fraiture
Philippe Herman
Isabel Taverniers
Marc De Loose
Filip Van Nieuwerburgh
Dieter Deforce
Nancy H. Roosens
A1
Journal Article
in
FOOD CHEMISTRY
2015
Viral small-RNA analysis of Bombyx mori larval midgut during persistent and pathogenic cytoplasmic polyhedrosis virus infection
Aris Zografidis
Filip Van Nieuwerburgh
Anna Kolliopoulou
Konstantinos Apostolou-Karampelis
Steven R Head
Dieter Deforce
Guy Smagghe
Luc Swevers
A1
Journal Article
in
JOURNAL OF VIROLOGY
2015
Whole exome sequencing as a novel tool for the detection of modifier genes in Pseudoxanthoma elasticum
Eva De Vilder
Filip Van Nieuwerburgh
Dieter Deforce
Ludovic Martin
Georges Lefthériotis
Paul Coucke
Anne De Paepe
Olivier Vanakker
C3
Conference
2015
Whole exome sequencing as a novel tool for the detection of modifier genes in pseudoxanthoma elasticum
eva De Vilder
Filip Van Nieuwerburgh
Dieter Deforce
Ludovic Martin
Georges Lefthériotis
Anne De Paepe
Olivier Vanakker
C3
Conference
2015
Whole exome sequencing the dog
Bart Broeckx
Christophe Hitte
Frank Coopman
Geert Verhoeven
Sarah De Keulenaer
Ellen De Meester
Thomas Derrien
Jessica Alfoldi
Kerstin Lindblad-Toh
Tim Bosmans
et al.
C3
Conference
2015
Whole genome amplification with SurePlex results in better copy number alteration detection using sequencing data compared to the MALBAC method
Lieselot Deleye
Dieter De Coninck
CHRISTODOULOS CHRISTODOULOU
Tom Sante
Annelies Dheedene
Björn Heindryckx
Etienne Van den Abbeel
Petra De Sutter
Björn Menten
Dieter Deforce
et al.
A1
Journal Article
in
SCIENTIFIC REPORTS
2015
2014
Autovaccination confers protection against Devriesea agamarum associated septicemia but not dermatitis in bearded dragons (Pogona vitticeps)
Tom Hellebuyck
Katleen Van Steendam
Dieter Deforce
Mark Blooi
Filip Van Nieuwerburgh
Evelien Bullaert
Richard Ducatelle
Freddy Haesebrouck
Frank Pasmans
An Martel
A1
Journal Article
in
PLOS ONE
2014
Detailed method description for noninvasive monitoring of differentiation status of human embryonic stem cells
Ellen Scheerlinck
Katleen Van Steendam
Mado Vandewoestyne
Trees Lepez
Veerle Gobin
Paulien Meert
Liesbeth Vossaert
Filip Van Nieuwerburgh
Ann Van Soom
Luc Peelman
et al.
A1
Journal Article
in
ANALYTICAL BIOCHEMISTRY
2014
Development and performance of a targeted whole exome sequencing enrichment kit for the dog (Canis Familiaris Build 3.1)
Bart Broeckx
Frank Coopman
Geert Verhoeven
Valérie Bavegems
Sarah De Keulenaer
Ellen De Meester
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
SCIENTIFIC REPORTS
2014
Draft genome sequence of methicillin-resistant Staphylococcus epidermidis strain ET-024, isolated from an endotracheal tube biofilm of a mechanically ventilated patient
Ilse Vandecandelaere
Filip Van Nieuwerburgh
Dieter Deforce
Hans Nelis
Tom Coenye
A4
Journal Article
in
GENOME ANNOUNCEMENTS
2014
Illumina sequencing of 15 deafness genes using fragmented amplicons
Filip Van Nieuwerburgh
Sarah De Keulenaer
Joachim De Schrijver
Jo Vandesompele
Wim Van Criekinge
Paul Coucke
Dieter Deforce
A2
Journal Article
in
BMC RESEARCH NOTES
2014
Library construction for next-generation sequencing: overviews and challenges
Steven R Head
H Kiyomi Komori
Sarah A LaMere
Thomas Whisenant
Filip Van Nieuwerburgh
Daniel R Salomon
Phillip Ordoukhanian
A1
Journal Article
in
BIOTECHNIQUES
2014
My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing
Christophe Van Neste
Mado Vandewoestyne
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2014
Perfrin, a novel bacteriocin associated with netB positive Clostridium perfringens strains from broilers with necrotic eneteritis
Leen Timbermont
Lina De Smet
Filip Van Nieuwerburgh
Valeria R Pareira
Gonzalez Van Driessche
Freddy Haesebrouck
Richard Ducatelle
John Prescott
Dieter Deforce
Bart Devreese
et al.
A1
Journal Article
in
VETERINARY RESEARCH
2014
Presence and analysis of plasmids in human and animal associated Arcobacter species
Laid Douidah
Lieven De Zutter
Filip Van Nieuwerburgh
Dieter Deforce
Hanne Ingmer
Olivier Vandenberg
Anne-Marie Van Den Abeele
Kurt Houf
A1
Journal Article
in
PLOS ONE
2014
Quantification of integrated HIV DNA by repetitive-sampling Alu-HIV PCR on the basis of Poisson statistics
Ward De Spiegelaere
Eva Malatinková
Lindsay Lynch
Filip Van Nieuwerburgh
Peter Messiaen
Una O'Doherty
Linos Vandekerckhove
A1
Journal Article
in
CLINICAL CHEMISTRY
2014
Quantitative proteomics to characterize specific histone H2A proteolysis in chronic lymphocytic leukemia and the myeloid THP-1 cell line
Pieter Glibert
Liesbeth Vossaert
Katleen Van Steendam
Stijn Lambrecht
Filip Van Nieuwerburgh
Fritz Offner
Thomas Kipps
Maarten Dhaenens
Dieter Deforce
A1
Journal Article
in
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
2014
Retrospective study of the impact of miniSTRs on forensic DNA profiling of touch DNA samples
Filip Van Nieuwerburgh
David Van Hoofstat
Christophe Van Neste
Dieter Deforce
A1
Journal Article
in
SCIENCE & JUSTICE
2014
Safety assessment of the butyrate-producing Butyricicoccus pullicaecorum strain 25-3T, a potential probiotic for patients with inflammatory bowel disease, based on oral toxicity tests and whole genome sequencing
Marjan Steppe
Filip Van Nieuwerburgh
Griet Vercauteren
Filip Boyen
Venessa Eeckhaut
Dieter Deforce
Freddy Haesebrouck
Richard Ducatelle
Filip Van Immerseel
A1
Journal Article
in
FOOD AND CHEMICAL TOXICOLOGY
2014
The BCESM genomic region contains a regulator involved in quorum sensing and persistence in Burkholderia cenocepacia J2315
Heleen Van Acker
Evelien De Canck
Filip Van Nieuwerburgh
Andrea Sass
Dieter Deforce
Hans Nelis
Tom Coenye
A1
Journal Article
in
FUTURE MICROBIOLOGY
2014
The effects of positioning, reason for screening and the referring veterinarian on prevalence estimates of canine hip dysplasia
Bart Broeckx
Geert Verhoeven
Frank Coopman
Wim Van Haeringen
Tim Bosmans
Ingrid Gielen
Sara Henckens
Jimmy Saunders
Henri van Bree
Bernadette Van Ryssen
et al.
A1
Journal Article
in
VETERINARY JOURNAL
2014
2013
Ancient dispersal of the human fungal pathogen Cryptococcus gattii from the Amazon rainforest
Ferry Hagen
Paulo C Ceresini
Itzhack Polacheck
Hansong Ma
Filip Van Nieuwerburgh
Toni Gabaldón
Sarah Kagan
E Rhiannon Pursall
Hans L Hoogveld
Leo JJ van Iersel
et al.
A1
Journal Article
in
PLOS ONE
2013
Caspase-14-deficient mice are more prone to the development of parakeratosis
Esther Hoste
Geertrui Denecker
Barbara Gilbert
Filip Van Nieuwerburgh
Leslie van der Fits
Bob Asselbergh
Riet De Rycke
Jean-Pierre Hachem
Dieter Deforce
Errol P Prens
et al.
A1
Journal Article
in
JOURNAL OF INVESTIGATIVE DERMATOLOGY
2013
Differential transcriptome analysis of glandular and filamentous trichomes in Artemisia annua
Sandra Soetaert
Christophe Van Neste
Mado Vandewoestyne
Steven R Head
Alain Goossens
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
BMC PLANT BIOLOGY
2013
Genome sequence of Helicobacter heilmannii sensu stricto ASB1 isolated from the gastric mucosa of a kitten with severe gastritis
Annemieke Smet
Filip Van Nieuwerburgh
Jesica Ledesma
Bram Flahou
Dieter Deforce
Richard Ducatelle
Freddy Haesebrouck
A4
Journal Article
in
GENOME ANNOUNCEMENTS
2013
Genome-wide association study of obsessive-compulsive disorder
SE Stewart
D Yu
JM Scharf
BM Neale
JA Fagerness
CA Mathews
PD Arnold
PD Evans
ER Gamazon
L Osiecki
et al.
A1
Journal Article
in
MOLECULAR PSYCHIATRY
2013
Partitioning the heritability of Tourette syndrome and obsessive compulsive disorder reveals differences in genetic architecture
Lea K Davis
Dongmei Yu
Clare L Keenan
Eric R Gamazon
Anuar I Konkashbaev
Eske M Derks
Benjamin M Neale
Jian Yang
S Hong Lee
Patrick Evans
et al.
A1
Journal Article
in
PLOS GENETICS
2013
PiTRAQ, a strategy to simultaneously correlate protein expression and phosphorylation stoichiometry between different samples : evaluation on different mass spectrometers
Pieter Glibert
Maarten Dhaenens
Paulien Meert
Niklaas Colaert
Filip Van Nieuwerburgh
Lennart Martens
Dieter Deforce
C3
Conference
2013
Presence and potential of cell free DNA in different types of forensic samples
Mado Vandewoestyne
David Van Hoofstat
Aimee Franssen
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2013
Prevalence of genetic disorders in dogs from Belgium, the Netherlands and Germany
Bart Broeckx
Frank Coopman
Geert Verhoeven
Wim Van Haeringen
Tim Bosmans
Ingrid Gielen
Jimmy Saunders
Henri van Bree
Filip Van Nieuwerburgh
Bernadette Van Ryssen
et al.
C3
Conference
2013
Quantification of integrated HIV DNA by repetitive sampling Alu-HIV PCR and Poisson statistics
Ward De Spiegelaere
Eva Malatinková
Filip Van Nieuwerburgh
Una O'Doherty
Linos Vandekerckhove
C3
Conference
2013
The prevalence of nine genetic disorders in a dog population from Belgium, the Netherlands and Germany
Bart Broeckx
Frank Coopman
Geert Verhoeven
Wim Van Haeringen
Leanne van de Goor
Tim Bosmans
Ingrid Gielen
Jimmy Saunders
Sandra Soetaert
Henri van Bree
et al.
A1
Journal Article
in
PLOS ONE
2013
Transcriptome and small RNA analysis of larval midgut tissue persistently and acutely infected by cytoplasmic polyhedrosis virus (CPV) in the silkmoth Bombyx mori
L Swevers
Filip Van Nieuwerburgh
A Kolliopoulou
J Sun
Guy Smagghe
C3
Conference
2013
Trichomes, the key to an increased production of artemisinin in Artemisia annua
Sandra Soetaert
Dieter Deforce
Alain Goossens
Filip Van Nieuwerburgh
Dissertation
2013
2012
Assessment of microbial diversity in biofilms recovered from endotracheal tubes using culture dependent and independent approaches
Ilse Vandecandelaere
Nele Matthijs
Filip Van Nieuwerburgh
Dieter Deforce
PETER VOSTERS
Liesbet De Bus
Hans Nelis
Pieter Depuydt
Tom Coenye
A1
Journal Article
in
PLOS ONE
2012
Catechol-O-methyltranferase gene expression is associated with response to citalopram in obsessive-compulsive disorder
Nienke CC Vulink
Herman GM Westenberg
Filip Van Nieuwerburgh
Dieter Deforce
Sjoerd BAHA Fluitman
Jantien SC Meinardi
Damiaan Denys
A1
Journal Article
in
INTERNATIONAL JOURNAL OF PSYCHIATRY IN CLINICAL PRACTICE
2012
Evaluation of a strategy for parallel protein phosphorylation and expression analysis
Pieter Glibert
Maarten Dhaenens
Paulien Meert
Niklaas Colaert
Filip Van Nieuwerburgh
Lennart Martens
Dieter Deforce
C3
Conference
2012
Evaluation of three DNA extraction protocols for forensic STR typing after laser capture microdissection
Mado Vandewoestyne
Filip Van Nieuwerburgh
David Van Hoofstat
Dieter Deforce
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2012
Fetal microchimeric cells in the blood of women with an autoimmune thyroid disease
Trees Lepez
Mado Vandewoestyne
Filip Van Nieuwerburgh
Kris Poppe
Brigit Velkeniers
Dieter Deforce
C3
Conference
2012
Forensic STR analysis using massive parallel sequencing
Christophe Van Neste
Filip Van Nieuwerburgh
David Van Hoofstat
Dieter Deforce
A1
Journal Article
in
FORENSIC SCIENCE INTERNATIONAL-GENETICS
2012
Full genome sequences of all nine Chlamydia psittaci genotype reference strains
Sarah Van Lent
Jurgen R Piet
Delphine Sylvie Anne Beeckman
Arie van der Ende
Filip Van Nieuwerburgh
Patrik Bavoil
Garry Myers
Daisy Vanrompay
Yvonne Pannekoek
A1
Journal Article
in
JOURNAL OF BACTERIOLOGY
2012
Illumina mate-paired DNA sequencing-library preparation using Cre-Lox recombination
Filip Van Nieuwerburgh
Ryan C Thompson
Jessica Ledesma
Dieter Deforce
Terry Gaasterland
Phillip Ordoukhanian
Steven R Head
A1
Journal Article
in
NUCLEIC ACIDS RESEARCH
2012
Laser capture microdissection in forensics
Mado Vandewoestyne
David Van Hoofstat
Filip Van Nieuwerburgh
Dieter Deforce
C3
Conference
2012
Molecular diagnostics for congenital hearing loss including 15 deafness genes using a next generation sequencing platform
Sarah De Keulenaer
Jan Hellemans
Steve Lefever
Jean-Pierre Renard
Joachim De Schrijver
Hendrik Van de Voorde
Mohammad Amin Tabatabaiefar
Filip Van Nieuwerburgh
Daisy Flamez
Filip Pattyn
et al.
A1
Journal Article
in
BMC MEDICAL GENOMICS
2012
Perfrin, a novel bacteriocin from a necrotic enteritis associated Clostridium perfringens strain
Leen Timbermont
Sofie Geeraerts
Lina De Smet
Filip Van Nieuwerburgh
Valeria R Parreira
Gonzalez Van Driessche
Freddy Haesebrouck
Richard Ducatelle
John Prescott
Dieter Deforce
et al.
C3
Conference
2012
Purification and characterization of Perfrin, a novel bacteriocin from a virulent Clostridium perfringens strain
Leen Timbermont
Lina De Smet
Anouk Lanckriet
Filip Van Nieuwerburgh
Valeria R Parreira
Gonzalez Van Driessche
Freddy Haesebrouck
Richard Ducatelle
John Prescott
Dieter Deforce
et al.
C3
Conference
2012
Relation between the FBN2 haplotype and phenotypical hip dysplasia
Bart Broeckx
Frank Coopman
Geert Verhoeven
Tim Bosmans
Ann CC Criel
Ingrid Gielen
Jimmy Saunders
Sandra Soetaert
Henri van Bree
Wim Van Haeringen
et al.
C3
Conference
2012
Variations in the exome of the LNCaP prostate cancer cell line
Lien Spans
Zeynep Kalender Atak
Filip Van Nieuwerburgh
Dieter Deforce
Evelyne Lerut
Stein Aerts
Frank Claessens
A1
Journal Article
in
PROSTATE
2012
2011
Directional RNA deep sequencing sheds new light on the transcriptional response of Anabaena sp strain PCC 7120 to combined-nitrogen deprivation
Britt L Flaherty
Filip Van Nieuwerburgh
Steven R Head
James W Golden
A1
Journal Article
in
BMC GENOMICS
2011
Dissection of the phytohormonal regulation of trichome formation and biosynthesis of the antimalarial compound artemisinin in Artemisia annua plants
Lies Maes
Filip Van Nieuwerburgh
Yansheng Zhang
Darwin W Reed
Jacob Pollier
Sofie Vande Casteele
Dirk Inzé
Patrick S Covello
Dieter Deforce
Alain Goossens
A1
Journal Article
in
NEW PHYTOLOGIST
2011
Fetal microchimeric cells in blood of women with an autoimmune thyroid disease
Trees Lepez
Mado Vandewoestyne
Shahid Hussain
Filip Van Nieuwerburgh
Kris Poppe
Brigitte Velkeniers
Jean Kaufman
Dieter Deforce
A1
Journal Article
in
PLOS ONE
2011
Modification of citrulline residues with 2,3-butanedione facilitates their detection by liquid chromatography/mass spectrometry
Marlies De Ceuleneer
Vanessa De Wit
Katleen Van Steendam
Filip Van Nieuwerburgh
Kelly Tilleman
Dieter Deforce
A1
Journal Article
in
RAPID COMMUNICATIONS IN MASS SPECTROMETRY
2011
Practical tools to implement massive parallel pyrosequencing of PCR products in next generation molecular diagnostics
Kim De Leeneer
Joachim De Schrijver
Lieven Clement
Machteld Baetens
Steve Lefever
Sarah De Keulenaer
Wim Van Criekinge
Dieter Deforce
Filip Van Nieuwerburgh
Sofie Bekaert
et al.
A1
Journal Article
in
PLOS ONE
2011
Quantitative bias in Illumina TruSeq and a novel post amplification barcoding strategy for multiplexed DNA and small RNA deep sequencing
Filip Van Nieuwerburgh
Sandra Soetaert
Katie Podshivalova
Eileen Ay-Lin Wang
Lana Schaffer
Dieter Deforce
Daniel R Salomon
Steven R Head
Phillip Ordoukhanian
A1
Journal Article
in
PLOS ONE
2011
Sources of DNA contamination and decontamination procedures in the forensic laboratory
Mado Vandewoestyne
David Van Hoofstat
Sabine De Groote
Nicky Van Thuyne
Saskia Haerinck
Filip Van Nieuwerburgh
Dieter Deforce
A2
Journal Article
in
INTERNATIONAL JOURNAL OF FORENSIC PRACTICE AND RESEARCH
2011
Transcriptome analysis of apical and sub-apical cells of Artemisia annua trichomes with next-generation-sequencing
Sandra Soetaert
Filip Van Nieuwerburgh
Peter Brodelius
Alain Goossens
Dieter Deforce
C3
Conference
2011
Whole genome sequence analysis of Helicobacter heilmannii
Annemieke Smet
Filip Van Nieuwerburgh
Bram Flahou
Frank Pasmans
Dieter Deforce
Richard Ducatelle
Freddy Haesebrouck
C3
Conference
2011
2010
Analysing 454 amplicon resequencing experiments using the modular and database oriented Variant Identification Pipeline
Joachim De Schrijver
Kim De Leeneer
Steve Lefever
Nick Sabbe
Filip Pattyn
Filip Van Nieuwerburgh
Paul Coucke
Dieter Deforce
Jo Vandesompele
Sofie Bekaert
et al.
A1
Journal Article
in
BMC BIOINFORMATICS
2010
Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences
Annemieke Smet
Filip Van Nieuwerburgh
Tom Vandekerckhove
An Martel
Dieter Deforce
Patrick Butaye
Freddy Haesebrouck
A1
Journal Article
in
PLOS ONE
2010
Compulsivity in mouse strains homologous with chromosomes 7p and 15q linked tot obsessive-compulsive disorder
Martien JH Kas
Cigdem Gelegen
Filip Van Nieuwerburgh
Herman GM Westenberg
Dieter Deforce
Damiaan Denys
A1
Journal Article
in
AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS
2010
The role of the COMT Val158Met polymorphism in the phenotypic expression of obsessive-compulsive disorder
Hilga Katerberg
Danielle C Cath
Damiaan AJP Denys
Peter Heutink
Annemiek Polman
Filip Van Nieuwerburgh
Dieter Deforce
Zoltán Bochdanovits
Anton JLM van Balkom
Johan A den Boer
A1
Journal Article
in
AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS
2010
2009
Automatic detection of spermatozoa for laser capture microdissection
Mado Vandewoestyne
David Van Hoofstat
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
INTERNATIONAL JOURNAL OF LEGAL MEDICINE
2009
Impact of allelic dropout on evidential value of forensic DNA profiles
Filip Van Nieuwerburgh
Els Goetghebeur
Mado Vandewoestyne
Dieter Deforce
A1
Journal Article
in
BIOINFORMATICS
2009
Metabolite analysis of laser captured apical and subapical cells of Artemisia annua trichomes
Sandra Soetaert
Filip Van Nieuwerburgh
Sofie Vande Casteele
Mikael E Olsson
Mado Vandewoestyne
Peter E Brodelius
Alain Goossens
Dieter Deforce
C3
Conference
2009
Phytohormonal regulation of gland formation and artemisinin biosynthesis in Artemisia annua
Filip Van Nieuwerburgh
Lies Maes
Sofie Vande Casteele
Sandra Soetaert
Marc Van Montagu
Dirk Inzé
Dieter Deforce
Alain Goossens
C3
Conference
2009
RMNE probability of Forensic DNA profiles with allelic drop-out
Filip Van Nieuwerburgh
Els Goetghebeur
Mado Vandewoestyne
Dieter Deforce
A2
Journal Article
in
Forensic science international. Genetics
2009
Response to serotonin reuptake inhibitors in OCD is not influenced by common CYP2D6 polymorphisms
Filip Van Nieuwerburgh
Damiaan Denys
Herman Westenberg
Dieter Deforce
A1
Journal Article
in
INTERNATIONAL JOURNAL OF PSYCHIATRY IN CLINICAL PRACTICE
2009
Suspension fluorescence in situ hybridization (S-FISH) combined with automatic detection and laser microdissection for STR profiling of male cells in male/female mixtures
Mado Vandewoestyne
David Van Hoofstat
Filip Van Nieuwerburgh
Dieter Deforce
A1
Journal Article
in
INTERNATIONAL JOURNAL OF LEGAL MEDICINE
2009
2008
Automatic detection of spermatozoa for laser capture microdissection
Mado Vandewoestyne
David Van Hoofstat
Filip Van Nieuwerburgh
Dieter Deforce
C3
Conference
2008
Response to paroxetine and venlafaxine in OCD is not determined by common CYP2D6 polymorphisms
Filip Van Nieuwerburgh
D. Denys
Dieter Deforce
C3
Conference
2008
Serotonin Related Genes Affect Antidepressant Treatment in Obsessive-Compulsive Disorder
Filip Van Nieuwerburgh
Dieter Deforce
D DENYS
A2
Journal Article
in
Progress in Neurotherapeutics and Neuropsychopharmacology
2008
Serotonin related genes affect antidepressant treatment in obsessive-compulsive disorder
Filip Van Nieuwerburgh
Dieter Deforce
Damiaan Denys
Bookchapter
in
Progress in Neurotherapeutics and Neuropsychopharmacology
2008
Shorter CAG repeats in the androgen receptor gene may enhance hyperandrogenicity in polycystic ovary syndrome
Filip Van Nieuwerburgh
Dominic Stoop
Patrick Cabri
Marc Dhont
Dieter Deforce
Petra De Sutter
A1
Journal Article
in
GYNECOLOGICAL ENDOCRINOLOGY
2008
Shorter CAG repeats in the androgen receptor gene may enhance hyperandrogenicity in polycystic ovary syndrome (PCOS)
Filip Van Nieuwerburgh
Dominic Stoop
Patrick Cabri
Marc Dhont
Petra De Sutter
Dieter Deforce
C3
Conference
2008
2007
Gene discovery: Polymorphism association with obsessive-compulsive disorder and proteome analysis of Artemisia annua.
Filip Van Nieuwerburgh
D Deforce
Dissertation
2007
Prediction of response to paroxetine and venlafaxine by serotonin-related genes in obsessive-compulsive disorder in a randomized, double-blind trial
Damiaan Denys
Filip Van Nieuwerburgh
Dieter Deforce
Herman GM Westenberg
A1
Journal Article
in
JOURNAL OF CLINICAL PSYCHIATRY
2007
Virilizing clinical features of PCO patients with normal androgen levels may result from a shorter CAG repeat length of the androgen receptor gene
D STOOP
Filip Van Nieuwerburgh
Y ZAHN
LENKA GALAJDOVA
KAATJE DIRCKX
P CABRI
EVA VERSCHUEREN
Jan Gerris
Marc Dhont
Dieter Deforce
et al.
C3
Conference
2007
2006
Association between serotonergic candidate genes and specific phenotypes of obsessive compulsive disorder
D DENYS
Filip Van Nieuwerburgh
Dieter Deforce
HGM WESTENBERG
A1
Journal Article
in
JOURNAL OF AFFECTIVE DISORDERS
2006
Association between the dopamine D-2 receptor TaqI A2 allele and low activity COMT allele with obsessive-compulsive disorder in males
D DENYS
Filip Van Nieuwerburgh
Dieter Deforce
H WESTENBERG
A1
Journal Article
in
EUROPEAN NEUROPSYCHOPHARMACOLOGY
2006
Development and evaluation of different normalization strategies for gene expression studies in Candida albicans biofilms by real-time PCR
Heleen Nailis
Tom Coenye
Filip Van Nieuwerburgh
Dieter Deforce
Hans Nelis
A1
Journal Article
in
BMC MOLECULAR BIOLOGY
2006
Quantitation of artemisinin and its biosynthetic precursors in Artemisia annua L. by high performance liquid chromatography - electrospray quadrupole time-of-flight tandem mass spectrometry
Filip Van Nieuwerburgh
Sofie Vande Casteele
Lies Maes
Alain Goossens
Dirk Inzé
Jan Van Bocxlaer
Dieter Deforce
A1
Journal Article
in
JOURNAL OF CHROMATOGRAPHY A
2006
2005
Prediction of response to paroxetine and venlafaxine by serotonin related genes in obsessive-compulsive disorder
Damiaan Denys
Filip Van Nieuwerburgh
Dieter Deforce
Herman Westenberg
C3
Conference
2005