Research Explorer

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Researcher

Dries Decap

Awards & Distinctions

14 Results

2022

BLSSpeller to discover novel regulatory motifs in maize

Razgar Seyed RahmaniDries DecapJan FostierKathleen Marchal

A1 Journal Article in DNA RESEARCH

Halvade somatic : somatic variant calling with Apache Spark

Dries DecapLouise de Schaetzen van BrienenMaarten LarmuseauPascal CostanzaCharlotte HerzeelRoel WuytsKathleen MarchalJan Fostier

A1 Journal Article in GIGASCIENCE

2021

Multithreaded variant calling in elPrep 5

Charlotte HerzeelPascal CostanzaDries DecapJan FostierRoel WuytsWilfried Verachtert

A1 Journal Article in PLOS ONE

2019

IAMBEE : a web-service for the identification of adaptive pathways from parallel evolved clonal populations

Camilo Andrés Pérez RomeroBram WeytjensDries DecapToon SwingsJan MichielsDries De MaeyerKathleen Marchal

A1 Journal Article in NUCLEIC ACIDS RESEARCH

elPrep 4 : a multithreaded framework for sequence analysis

Charlotte HerzeelPascal CostanzaDries DecapJan FostierWilfried Verachtert

A1 Journal Article in PLOS ONE

2017

Hadoop-based solutions for variant calling and variant analysis

Dries DecapJan Fostier

Halvade-RNA : parallel variant calling from transcriptomic data using MapReduce

Dries DecapJoke ReumersCharlotte HerzeelPascal CostanzaJan Fostier

A1 Journal Article in PLOS ONE

2016

Performance analysis of a parallel, multi-node pipeline for DNA sequencing

Dries DecapJoke ReumersCharlotte HerzeelPascal CostanzaJan Fostier

2015

BLSSpeller : exhaustive comparative discovery of conserved cis-regulatory elements

Dieter De WitteJan Van de VeldeDries DecapMichiel Van BelPieter AudenaertPiet DemeesterBart DhoedtKlaas VandepoeleJan Fostier

A1 Journal Article in BIOINFORMATICS

Halvade: scalable sequence analysis with MapReduce

Dries DecapJoke ReumersCharlotte HerzeelPascal CostanzaJan Fostier

A1 Journal Article in BIOINFORMATICS

elPrep: high-performance preparation of sequence alignment/map files for variant calling

Charlotte HerzeelPascal CostanzaDries DecapJan FostierJoke Reumers

A1 Journal Article in PLOS ONE

2014

Halvade: whole genome analysis with MapReduce

Dries DecapJ ReumersC HerzeelP CostanzaJan Fostier

2012

Flexible motif discovery using feature selection trees: a high performance computing approach

Dries DecapBart DhoedtJan FostierYvan Saeys

Flexible motif discovery using feature selection trees: a high performance computing approach (poster)

Dries DecapBart DhoedtJan FostierYvan Saeys