Research Explorer

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Researcher

Dominique Eeckhout

Awards & Distinctions

60 Results

2025

Pupylation-based proximity labeling reveals regulatory factors in cellulose biosynthesis in Arabidopsis

Shuai ZhengLise C. NoackOuda KhammyAndreas De MeyerGhazanfar Abbas KhanNancy De WinneDominique EeckhoutDaniël Van DammeStaffan Persson

U Journal Article in Nature Communications

2024

A nitrogen-specific interactome analysis sheds light on the role of the SnRK1 and TOR kinases in plant nitrogen signaling

Freya PersynWouter SmaggheDominique EeckhoutToon MertensThomas SmorscekNancy De WinneGeert PersiauEveline Van De SlijkeNathalie CrepinAstrid Gadeyne et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

Biomolecular condensation orchestrates clathrin-mediated endocytosis in plants

Jonathan DragwidgeYanning WangLysiane BrocardAndreas De MeyerRoman HudečekDominique EeckhoutPeter GronesMatthieu BuridanClément ChambaudPřemysl Pejchar et al.

A1 Journal Article in NATURE CELL BIOLOGY

2023

Adaptor protein complex interaction map in Arabidopsis identifies P34 as a common stability regulator

Peng WangWei SiaoXiuyang ZhaoDeepanksha AroraRen WangDominique EeckhoutJelle Van LeeneRahul KumarAnaxi HoubaertNancy De Winne et al.

A1 Journal Article in NATURE PLANTS

Phase separation-based visualization of protein-protein interactions and kinase activities in plants (vol 35, pg 3280, 2023)

Alaeddine SafiWouter SmaggheAmanda GonçalvesQing WangKe XuAna Fernandez SalinaBenjamin CappeFranck RiquetEvelien MylleDominique Eeckhout et al.

Phase separation-based visualization of protein-protein interactions and kinase activities in plants

Alaeddine SafiWouter SmaggheAmanda GonçalvesQing WangKe XuAna Fernandez SalinaBenjamin CappeFranck RiquetEvelien MylleDominique Eeckhout et al.

A1 Journal Article in PLANT CELL

The endocytic TPLATE complex internalizes ubiquitinated plasma membrane cargo (vol 8, pg 1467, 2022)

Peter GronesAndreas De MeyerRoman PleskotEvelien MylleMichael KrausMichaël VandorpeKlaas YpermanDominique EeckhoutJonathan DragwidgeQihang Jiang et al.

2022

Mapping of the plant SnRK1 kinase signalling network reveals a key regulatory role for the class II T6P synthase-like proteins

Jelle Van LeeneDominique EeckhoutAstrid GadeyneCaroline MatthijsChao HanNancy De WinneGeert PersiauEveline Van De SlijkeFreya PersynToon Mertens et al.

A1 Journal Article in NATURE PLANTS

Mapping the adaptor protein complex interaction network in Arabidopsis identifies P34 as a common stability regulator

Peng WangWei SiaoXiuyang ZhaoDeepanksha AroraRen WangDominique EeckhoutJelle Van LeeneRahul KumarAnaxi HoubaertNancy De Winne et al.

Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components

Dana A. DahhanGregory D. ReynoldsJessica J. CárdenasDominique EeckhoutAlexander JohnsonKlaas YpermanWalter A. KaufmannNou VangXu YanInhwan Hwang et al.

A1 Journal Article in PLANT CELL

ROPGAP-dependent interaction between brassinosteroid and ROP2-GTPase signaling controls pavement cell shape in Arabidopsis

Cheng ZhangTheresa LausterWenxin TangAnaxi HoubaertShanshuo ZhuDominique EeckhoutIve De SmetGeert De JaegerThomas B. JacobsTongda Xu et al.

A1 Journal Article in CURRENT BIOLOGY

SAMBA controls cell division rate during maize development

Pan GongMichiel BontinckKirin DemuynckJolien De BlockKris GevaertDominique EeckhoutGeert PersiauStijn AesaertGriet CoussensMaria Van Lijsebettens et al.

A1 Journal Article in PLANT PHYSIOLOGY

The endocytic TPLATE complex internalizes ubiquitinated plasma membrane cargo

Peter GronesAndreas De MeyerRoman PleskotEvelien MylleMichael KrausMichaël VandorpeKlaas YpermanDominique EeckhoutJonathan DragwidgeQihang Jiang et al.

A1 Journal Article in NATURE PLANTS

2021

Arabidopsis casein kinase 2 triggers stem cell exhaustion under Al toxicity and phosphate deficiency through activating the DNA damage response pathway

Pengliang WeiManon DemulderPascale DavidThomas EekhoutKaoru Okamoto YoshiyamaLong NguyenIlse VercauterenDominique EeckhoutMargot GalleGeert De Jaeger et al.

A1 Journal Article in PLANT CELL

Conditional destabilization of the TPLATE complex impairs endocytic internalization

Jie WangKlaas YpermanPeter GronesQihang JiangJonathan DragwidgeEvelien MylleEliana MorJonah NolfDominique EeckhoutGeert De Jaeger et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct EH domains of the endocytic TPLATE complex confer lipid and protein binding

Klaas YpermanAnna PapageorgiouRomain MerceronSteven De MunckYehudi BlochDominique EeckhoutQihang JiangPieter TackRosa GrigoryanThomas Evangelidis et al.

A1 Journal Article in NATURE COMMUNICATIONS

Molecular architecture of the endocytic TPLATE complex

Klaas YpermanJie WangDominique EeckhoutJoanna WinklerLam Dai VuMichaël VandorpePeter GronesEvelien MylleMichael KrausRomain Merceron et al.

A1 Journal Article in SCIENCE ADVANCES

The DREAM complex represses growth in response to DNA damage in Arabidopsis

Lucas LangAladár Pettkó-SzandtnerHasibe Tunçay ElbaşıHirotomo TakatsukaYuji NomotoAhmad ZakiStefan DorokhovGeert De JaegerDominique EeckhoutMasaki Ito et al.

A1 Journal Article in LIFE SCIENCE ALLIANCE

Unraveling the MAX2 protein network in Arabidopsis thaliana : identification of the protein phosphatase PAPP5 as a novel MAX2 interactor

Sylwia Magdalena StrukCarolien De CuyperAnse JacobsLukas BraemAlan WaltonAnnick De KeyserStephen DepuydtLam Dai VuIve De SmetFrançois-Didier Boyer et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

2020

Establishment of proximity-dependent biotinylation approaches in different plant model systems

Deepanksha AroraNikolaj B. AbelChen LiuPetra Van DammeKlaas YpermanDominique EeckhoutLam Dai VuJie WangAnna TornkvistFrancis Impens et al.

A1 Journal Article in PLANT CELL

FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes

Patricia Fernandez CalvoSabrina IñigoGaétan GlauserRobin Vanden BosscheMichelle TangBaohua LiRebecca De ClercqAstrid Nagels DurandDominique EeckhoutKris Gevaert et al.

A1 Journal Article in NEW PHYTOLOGIST

UBP12 and UBP13 negatively regulate the activity of the ubiquitin-dependent peptidases DA1, DAR1 and DAR2

Hannes VanhaerenYing ChenMattias VermeerschLiesbeth De MildeValerie De VleeschhauwerAnnelore NatranGeert PersiauDominique EeckhoutGeert De JaegerKris Gevaert et al.

A1 Journal Article in eLife

2019

Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase

Jelle Van LeeneChao HanAstrid GadeyneDominique EeckhoutCaroline MatthijsBernard CannootNancy De WinneGeert PersiauEveline Van De SlijkeBrigitte Van De Cotte et al.

A1 Journal Article in NATURE PLANTS

TPX2-LIKE PROTEIN 3 is the primary activator of α-Aurora kinases and is essential for embryogenesis

Joanna BorucXing-Guang DengEvelien MylleNienke BesbruggeMatthias Van DurmeDmitri DemidovEva Dvorak TomastikovaTon-Reen Connie TanMichaël VandorpeDominique Eeckhout et al.

A1 Journal Article in PLANT PHYSIOLOGY

2018

DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis

Amr NassrallahMartin RougéeClara BourbousseStephanie DrevensekSandra FonsecaElisa IniestoOuardia Ait-MohamedAnne-Flore Deton-CabanillasGerald ZabulonIkhlak Ahmed et al.

A1 Journal Article in ELIFE

GSyellow, a multifaceted tag for functional protein analysis in monocot and dicot plants

Nienke BesbruggeJelle Van LeeneDominique EeckhoutBernard CannootShubhada Rajabhau KulkarniNancy De WinneGeert PersiauEveline Van De SlijkeMichiel BontinckStijn Aesaert et al.

A1 Journal Article in PLANT PHYSIOLOGY

POLAR-guided signalling complex assembly and localization drive asymmetric cell division

Anaxi HoubaertCheng ZhangManish TiwariKun WangAlberto de Marcos SerranoDaniel SavatinMounashree J UrsMiroslava ZhiponovaGustavo GudesblatIsabelle Vanhoutte et al.

A1 Journal Article in NATURE

Recent trends in plant protein complex analysis in a developmental context

Michiel BontinckJelle Van LeeneAstrid GadeyneBert De RybelDominique EeckhoutHilde NelissenGeert De Jaeger

A1 Journal Article in FRONTIERS IN PLANT SCIENCE

2017

Identification of factors required for m6A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI

Kamil RůžičkaMi ZhangAna CampilhoZsuzsanna BodiMuhammad KashifMária SalehDominique EeckhoutSedeer El-ShowkHongying LiSilin Zhong et al.

A1 Journal Article in NEW PHYTOLOGIST

The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis

Andrés Ritter TraubSabrina IñigoPatricia Fernandez CalvoKen HeyndrickxStijn DhondtHua ShiLiesbeth De MildeRobin Vanden BosscheRebecca De ClercqDominique Eeckhout et al.

A1 Journal Article in NATURE COMMUNICATIONS

2016

Functional characterization of the Arabidopsis transcription factor bZIP29 reveals its role in leaf and root development

Jelle Van LeeneJonas BlommeShubhada Rajabhau KulkarniBernard CannootNancy De WinneDominique EeckhoutGeert PersiauEveline Van De SlijkeLeen VercruysseRobin Vanden Bossche et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Isolation of protein complexes from the model legume Medicago truncatula by tandem affinity purification in hairy root cultures

Jonas GoossensNathan De GeyterAlan WaltonDominique EeckhoutJan MertensJacob PollierJennifer Liliana Fiallos JuradoAnnick De KeyserRebecca De ClercqJelle Van Leene et al.

A1 Journal Article in PLANT JOURNAL

The SBT6.1 subtilase processes the GOLVEN1 peptide controlling cell elongation

Sarieh GhorbaniKurt HoogewijsTamara PecenkovaAna Fernandez SalinaAnnelies InzéDominique EeckhoutDorota KawaGeert De JaegerTom BeeckmanAnnemieke Madder et al.

A1 Journal Article in JOURNAL OF EXPERIMENTAL BOTANY

Transferring an optimized TAP-toolbox for the isolation of protein complexes to a portfolio of rice tissues

Maarten DedeckerJelle Van LeeneNancy De WinneDominique EeckhoutGeert PersiauEveline Van De SlijkeBernard CannootLeen VercruysseLies DumoulinNathalie Wojsznis et al.

A1 Journal Article in PLANT MOLECULAR BIOLOGY

2015

A repressor protein complex regulates leaf growth in Arabidopsis

Nathalie Gonzalez SanchezLaurens PauwelsAlexandra BaekelandtLiesbeth De MildeJelle Van LeeneNienke BesbruggeKen HeyndrickxAmparo Cuéllar PérezAstrid Nagels DurandRebecca De Clercq et al.

A1 Journal Article in PLANT CELL

An improved toolbox to unravel the plant cellular machinery by tandem affinity purification of Arabidopsis protein complexes

Jelle Van LeeneDominique EeckhoutBernard CannootNancy De WinneGeert PersiauEveline Van De SlijkeLeen VercruysseMaarten DedeckerAurine VerkestKlaas Vandepoele et al.

A1 Journal Article in NATURE PROTOCOLS

Dynamic changes in ANGUSTIFOLIA3 complex composition reveal a growth regulatory mechanism in the maize leaf

Hilde NelissenDominique EeckhoutKirin DemuynckGeert PersiauAlan WaltonMichiel Van BelMarieke VervoortJasper CandaeleJolien De BlockStijn Aesaert et al.

A1 Journal Article in PLANT CELL

2014

A generic tool for transcription factor target gene discovery in Arabidopsis cell suspension cultures based on tandem chromatin affinity purification

Aurine VerkestThomas AbeelKen HeyndrickxJelle Van LeeneChrista LanzEveline Van De SlijkeNancy De WinneDominique EeckhoutGeert PersiauFrank Van Breusegem et al.

A1 Journal Article in PLANT PHYSIOLOGY

ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development

Liesbeth VercruyssenAurine VerkestNathalie Gonzalez SanchezKen HeyndrickxDominique EeckhoutSoon-Ki HanTeddy JéguRafal ArchackiJelle Van LeeneMegan Andriankaja et al.

A1 Journal Article in PLANT CELL

Generation of VHH antibodies against the Arabidopsis thaliana seed storage proteins

Thomas De MeyerDominique EeckhoutRiet De RyckeSylvie De BuckSerge MuyldermansAnna Depicker

A1 Journal Article in PLANT MOLECULAR BIOLOGY

Sulfenome mining in Arabidopsis thaliana

Cezary WaszczakMosammat Salma AkterDominique EeckhoutGeert PersiauKhadija WahniNandita BodraInge Van MolleBarbara De SmetDidier VertommenKris Gevaert et al.

A1 Journal Article in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants

Astrid GadeyneClara Sánchez-RodríguezSteffen VannesteSimone Di RubboHenrik ZauberKevin VannesteJelle Van LeeneNancy De WinneDominique EeckhoutGeert Persiau et al.

A1 Journal Article in CELL

The cyclin-dependent kinase inhibitor KRP6 induces mitosis and impairs cytokinesis in giant cells induced by plant-parasitic nematodes in Arabidopsis

Paulo VieiraAnnelies De ClercqHilde StalsJelle Van LeeneEveline Van De SlijkeGert Van IsterdaelDominique EeckhoutGeert PersiauDaniël Van DammeAurine Verkest et al.

A1 Journal Article in PLANT CELL

2013

A protein phosphatase 2A complex spatially controls plant cell division

Lara SpinnerAstrid GadeyneKatia BelcramMagali GoussotMichael MoisonYann DurocDominique EeckhoutNancy De WinneEstelle SchaeferEveline Van De Slijke et al.

A1 Journal Article in NATURE COMMUNICATIONS

Clathrin adaptor complex AP-2 mediates endocytosis of BRASSINOSTEROID INSENSITIVE1 in Arabidopsis

Simone Di RubboNiloufer IraniSoo Youn KimZheng-Yi XuAstrid GadeyneWim DejongheIsabelle VanhoutteGeert PersiauDominique EeckhoutSibu Simon et al.

A1 Journal Article in PLANT CELL

2012

Selection of scFv phages specific for chloramphenicol acetyl transferase (CAT), as alternatives for antibodies in CAT detection assays

Bieke Van DorstJaytry MehtaElsa Rouah-MartinJelke BackeljauWim De CoenDominique EeckhoutGeert De JaegerRonny BlustJohan Robbens

A1 Journal Article in JOURNAL OF APPLIED TOXICOLOGY

2011

Isolation of transcription factor complexes from Arabidopsis cell suspension cultures by tandem affinity purification

Jelle Van LeeneDominique EeckhoutGeert PersiauEveline Van De SlijkeJan GeerinckGert Van IsterdaelErwin WittersGeert De Jaeger

Bookchapter in Plant transcription factors : methods and procotols

The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses

Patricia Fernández-CalvoAndrea ChiniGemma Fernández-BarberoJosé-Manuel ChicoSelena Gímenez-IbanezJan GeerinckDominique EeckhoutFabian SchweizerMarta GodoyJosé Manuel Franco-Zorrilla et al.

A1 Journal Article in PLANT CELL

2010

Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana

Jelle Van LeeneJens HollunderDominique EeckhoutGeert PersiauEveline Van De SlijkeHilde StalsGert Van IsterdaelAurine VerkestSandy NeirynckYelle Buffel et al.

A1 Journal Article in MOLECULAR SYSTEMS BIOLOGY

2009

A bioanalytical method for the proteome wide display and analysis of protein complexes from whole plant cell lysates

Noor RemmerieLuc RoefEveline Van De SlijkeJelle Van LeeneGeert PersiauDominique EeckhoutHilde StalsKris LaukensFilip LemièreEddy Esmans et al.

A1 Journal Article in PROTEOMICS

2007

A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana

Jelle Van LeeneHilde StalsDominique EeckhoutGeert PersiauEveline Van De SlijkeGert Van IsterdaelAnnelies De ClercqEric BonnetKris LaukensNoor Remmerie et al.

A1 Journal Article in MOLECULAR & CELLULAR PROTEOMICS

Mitochondrial type-I prohibitins of Arabidopsis thaliana are required for supporting proficient meristem development

Olivier Van AkenTamara PecenkovaBrigitte Van De CotteRiet De RyckeDominique EeckhoutHillel FrommGeert De JaegerErwin WittersGerrit BeemsterDirk Inzé et al.

A1 Journal Article in PLANT JOURNAL

2005

CD3 x CD28 cross-interacting bispecific antibodies improve tumor cell dependent T-cell activation

An WillemsSteve SchoonoogheDominique EeckhoutGeert De JaegerJohan GrootenNico Mertens

A1 Journal Article in CANCER IMMUNOLOGY IMMUNOTHERAPY

2004

A technology platform for the fast production of monoclonal recombinant antibodies against plant proteins and peptides

Dominique EeckhoutAnnelies De ClercqEveline Van De SlijkeJelle Van LeeneHilde StalsPeter CasteelsGeert PersiauDominique VercammenFrank Van BreusegemMarc Zabeau et al.

A1 Journal Article in JOURNAL OF IMMUNOLOGICAL METHODS

Type II metacaspases Atmc4 and Atmc9 of Arabidopsis thaliana cleave substrates after arginine and lysine

Dominique VercammenBrigitte Van De CotteGeert De JaegerDominique EeckhoutPeter CasteelsKlaas VandepoeleIsabel VandenbergheJozef Van BeeumenDirk InzéFrank Van Breusegem

A1 Journal Article in JOURNAL OF BIOLOGICAL CHEMISTRY

2000

Analysis of the interaction between single-chain variable fragments and their antigen in a reducing intracellular environment using the two-hybrid system

Geert De JaegerEsbjörn FiersDominique EeckhoutAnna Depicker

A1 Journal Article in FEBS LETTERS

Isolation and characterization of recombinant antibody fragments against CDC2a from Arabidopsis thaliana

Dominique EeckhoutEsbjörn FiersRebecca SienaertVeerle SnoeckAnna DepickerGeert De Jaeger

A1 Journal Article in EUROPEAN JOURNAL OF BIOCHEMISTRY

The plantibody approach: expression of antibody genes in plants to modulate plant metabolism or to obtain pathogen resistance

Geert De JaegerChris De WildeDominique EeckhoutEsbjörn FiersAnna Depicker

A1 Journal Article in PLANT MOLECULAR BIOLOGY

1999

High level accumulation of single-chain variable fragments in the cytosol of transgenic Petunia hybrida

Geert De JaegerEmmanuel BuysDominique EeckhoutChris De WildeAnni JacobsJyoti KapilaGeert AngenonMarc Van MontaguTom GeratsAnna Depicker

A1 Journal Article in EUROPEAN JOURNAL OF BIOCHEMISTRY

1997

Use of phage display for isolation and characterization of single-chain variable fragments against dihydroflavonol 4-reductase from Petunia hybrida

Geert De JaegerEmmanuel BuysDominique EeckhoutAnne-Marie BruynsMyriam De NeveChris De WildeTom GeratsMarc Van MontaguRainer FischerAnna Depicker

A1 Journal Article in FEBS LETTERS