Research Explorer

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Researcher

Danilo Babin

Publications & Research Data

Awards & Distinctions

77 Results

2026

Graph-theoretic detection and topology-preserving correction of false vessel merges in 3D neurovascular segmentations

Mohammadjavad SedghizadehJessie DuquesneElisabeth DhondtVincent KeeremanPeter VanlangenhoveCharlotte DebbautDanilo Babin

Influence of onyx injection rate during endovascular embolization of cerebral arteriovenous malformations : a computational fluid dynamics study

Kaat WilleJessie DuquesneMohammadjavad SedghizadehDanilo BabinVincent KeeremanElisabeth DhondtPeter VanlangenhoveCharlotte Debbaut

Modeling endovascular embolization for cerebral arteriovenous malformations : a review from lumped parameters models to patient-specific CFD

Jessie DuquesnePeter VanlangenhoveElisabeth DhondtVincent KeeremanDanilo BabinCharlotte Debbaut

A2 Journal Article in BIOPHYSICS REVIEWS

Multi-phase CFD simulations of cAVM embolizations : impact of catheter location on liquid embolic agent transport

Jessie DuquesneElisabeth DhondtMohammadjavad SedghizadehVincent KeeremanDanilo BabinPeter VanlangenhoveCharlotte Debbaut

2025

Artificial intelligence algorithm for detection of erosions and ankylosis on CT scans including the sacroiliac joints : multicentre development and validation of real-world detection performance

Thomas Van Den BergheDanilo BabinMin ChenVictor MylleAxel VlaminckRuben VerhackLarsen D'hietMartijn CallensDenim BrackHelena Maes et al.

Artificial intelligence outperforms humans in morphology-based oocyte selection in cattle

Annelies RaesDanilo BabinOsvaldo Américo Bogado PascottiniGeert OpsomerAnn Van SoomKatrien Smits

A1 Journal Article in SCIENTIFIC REPORTS

Clinical validation of deep learning for real-time tissue oxygenation estimation using spectral imaging

Jens De WinneSiri WillemsSiri LuthmanDanilo BabinHiep LuongWim Ceelen

Influence of onyx injection rate on hemodynamics during endovascular embolization of cerebral arteriovenous malformations : a computational fluid dynamics study

Kaat WilleJessie DuquesneMohammadjavad SedghizadehDanilo BabinVincent KeeremanElisabeth DhondtPeter VanlangenhoveCharlotte Debbaut

Large scale in vivo acquisition, segmentation and 3D reconstruction of cortical vasculature using μDoppler ultrasound imaging

Anoek StrumaneThéo LambertJan AeltermanDanilo BabinGabriel MontaldoWilfried PhilipsClément BrunnerAlan Urban

A1 Journal Article in NEUROINFORMATICS

Microcatheter tracking in the cerebral circulation for planning of arteriovenous malformation embolization using CNN

Mohammadjavad SedghizadehJessie DuquesneElisabeth DhondtLuc DefreyneUri SingferVincent KeeremanPeter VanlangenhoveCharlotte DebbautDanilo Babin

Multiphase modelling of liquid embolic agent injection for AVM embolization : a feasibility study

Jessie DuquesneKaat WilleMohammadjavad SedghizadehDanilo BabinVincent KeeremanLuc DefreyneElisabeth DhondtPeter VanlangenhoveCharlotte Debbaut

Real-time assessment of graft oxygenation and perfusion using spectral imaging for improved outcome in esophageal cancer surgery

Jens De WinneDanilo BabinHiep LuongSiri LuthmanElke Van DaeleHanne VanommeslaegheWim Ceelen

Real-time multispectral imaging for intraoperative monitoring of coronary artery bypass graft patency

Jens De WinneDanilo BabinHiep LuongSiri LuthmanAleksandar M. MilosavljevićŽivojin JonjevJan HrubikLazar Velicki

A1 Journal Article in JOURNAL OF BIOMEDICAL OPTICS

Towards real-time automatic microcatheter localization in cerebral X-ray angiography using patch-based CNNs

Mohammadjavad SedghizadehJessie DuquesneElisabeth DhondtVincent KeeremanPETER VANLANGENHOVECharlotte DebbautDanilo Babin

2024

Data efficient deep learning models for biomedical image segmentation

Marin BenčevićIrena GalićAleksandra PizuricaDanilo Babin

Deep learning-based microcatheter localization in the brain for pretreatment planning of arteriovenous malformation embolization

Mohammadjavad SedghizadehJessie DuquesneElisabeth DhondtLuc DefreyneUri SingferVincent KeeremanPeter VanlangenhoveCharlotte DebbautDanilo Babin

Directed graph analysis on theta-gamma phase-amplitude coupling : insights into Parkinson disease EEG data

Mohammadjavad SedghizadehMohammad Hossein HeydariHamid AghajanDanilo BabinWilfried Philips

Hyperspectral imaging reveals myocardial ischemia

Jens De WinneDanilo BabinHiep LuongSiri LuthmanA MilosavljevicZ JonjevLazar Velicki

Multispectral indices for real-time and non-invasive tissue ischemia monitoring using snapshot cameras

Jens De WinneAnoek StrumaneDanilo BabinSiri LuthmanHiep LuongWilfried Philips

A1 Journal Article in BIOMEDICAL OPTICS EXPRESS

Preoperative endovascular embolization planning for cerebral arteriovenous malformations : patient-specific compartmentalisation identification

Jessie DuquesneSaar VermijsMohammadjavad SedghizadehElisabeth DhondtLuc DefreyneUri SingferVincent KeeremanPeter VanlangenhoveDanilo BabinCharlotte Debbaut

Understanding skin color bias in deep learning-based skin lesion segmentation

Marin BenčevićMarija HabijanIrena GalićDanilo BabinAleksandra Pizurica

A1 Journal Article in COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

2023

Deep-learning based quantification of bovine oocyte quality from microscopy images

Matilde CostaAnoek StrumaneAnnelies RaesAnn Van SoomDanilo BabinJan Aelterman

Neural network algorithm for detection of erosions and ankylosis on CT of the sacroiliac joints : multicentre development and validation of diagnostic accuracy

Thomas Van Den BergheDanilo BabinMin ChenMartijn CallensDenim BrackHelena MaesJan LievensMarie LammensMaxime Van SumereLieve Morbée et al.

A1 Journal Article in EUROPEAN RADIOLOGY

Neural network algorithm for detection of erosions and ankylosis on CT of the sacroiliac joints : multicentre development and validation of diagnostic accuracy

Thomas Van Den BergheDanilo BabinMin ChenMartijn CallensDenim BrackHelena MaesJan LievensMarie LammensMaxime Van SumereLieve Morbée et al.

Real-time hyperspectral imaging for non-invasive monitoring of tissue ischemia

Anoek StrumaneJens De WinneDanilo BabinJan AeltermanHiep LuongWilfried Philips

2022

3D U-Net based method for fast segmentation of whole heart from CT images

Filip NovoselnikHrvoje LeventicIrena GalicDanilo Babin

An AI-based algorithm for automatic detection of erosion and ankylosis on CT images of the sacroiliac joints : multicentre development and validation

Thomas Van Den BergheMin ChenDanilo BabinNele HerregodsWouter HuysseJacob JaremkoFrederiek LalooAnn-Sophie De CraemerPhilippe CarronFilip Van den Bosch et al.

An AI-based algorithm for automatic detection of erosion and ankylosis on CT images of the sacroiliac joints : multicentre development and validation

Thomas Van Den BergheMin ChenDanilo BabinNele HerregodsWouter HuysseJacob JaremkoFrederiek LalooAnn-Sophie De CraemerPhilippe CarronFilip Van den Bosch et al.

Neural network based algorithm pipeline for automatic detection of erosions and ankylosis of the sacroiliac joints : development and validation using multicentre CT images

Thomas Van Den BergheMin ChenDanilo BabinNele HerregodsWouter HuysseJacob JaremkoFrederiek LalooAnn-Sophie De CraemerPhilippe CarronFilip Van den Bosch et al.

Optimization of deep learning algorithms for the cardiovascular system image processing using residual units

Marija HabijanIrena GalićAleksandra PizuricaDanilo Babin

Segmentation and quantification of bi-ventricles and myocardium using 3D SERes-U-Net

Marija HabijanIrena GalicHrvoje LeventicKresimir RomicDanilo Babin

Using the polar transform for efficient deep learning-based aorta segmentation in CTA images

Marin BenčevićMarija HabijanIrena GalićDanilo Babin

2021

A review on digital image processing techniques for in-vivo confocal images of the cornea

Raidel Herrera PeredaAlberto Taboada CrispiDanilo BabinWilfried PhilipsMárcio Holsbach Costa

A1 Journal Article in MEDICAL IMAGE ANALYSIS

A survey of left atrial appendage segmentation and analysis in 3D and 4D medical images

Hrvoje LeventicMarin BencevicDanilo BabinMarija HabijanIrena Galić

Guiding myocardial revascularization by algorithmic interpretation of FFR pullback curves : a proof of concept study

Jean-François ArgachaJean DecampBert VandelooDanilo BabinStijn LochyKaren Van den BusscheQuentin de HemptinnePanagiotis XaplanterisJulien MagnePatrick Segers et al.

A1 Journal Article in FRONTIERS IN CARDIOVASCULAR MEDICINE

Segmentation of endothelial cells of the cornea from the distance map of confocal microscope images

Raidel Herrera PeredaAlberto Taboada CrispiDanilo BabinWilfried Philips

A1 Journal Article in COMPUTERS IN BIOLOGY AND MEDICINE

Spatio-temporal algorithm for 3D sequences noise reduction

Ljubomir JovanovDanilo BabinWilfried Philips

Training on polar image transformations improves biomedical image segmentation

Marin BenčevićIrena GalicMarija HabijanDanilo Babin

A1 Journal Article in IEEE ACCESS

2020

Abdominal aortic aneurysm segmentation from CT images using modified 3D U-Net with deep supervision

Marija HabijanIrena GalicHrvoje LeventicKresimir RomicDanilo Babin

Centerline tracking of the single coronary artery from X-ray angiograms

Marija HabijanDanilo BabinIrena GalicHrvoje LeventicLazar VelickiMilenko Cankovic

Myocardial disease and ventricular arrhythmia in Marfan syndrome : a prospective study

Laura Muiño MosqueraHans De WildeDaniel DevosDanilo BabinLuc JordaensAnthony DemolderKatya De GrooteDaniël De WolfJulie De Backer

A1 Journal Article in ORPHANET JOURNAL OF RARE DISEASES

Neural network based whole heart segmentation from 3D CT images

Marija HabijanHrvoje LeventićIrena GalićDanilo Babin

A2 Journal Article in INTERNATIONAL JOURNAL OF ELECTRICAL AND COMPUTER ENGINEERING SYSTEMS

Overview of the whole heart and heart chamber segmentation methods

Marija HabijanDanilo BabinIrena GalićHrvoje LeventićKrešimir RomićLazar VelickiAleksandra Pizurica

A1 Journal Article in CARDIOVASCULAR ENGINEERING AND TECHNOLOGY

Segmentation of phase-contrast MR images for aortic pulse wave velocity measurements

Danilo BabinDaniel DevosLjiljana PlatisaLjubomir JovanovMarija HabijanHrvoje LeventićWilfried Philips

2019

Development of a planning tool for robot-assisted partial nephrectomy surgery based on 3D reconstructions of kidneys

Sarah VandenbulckePieter De BackerDanilo BabinPatrick SegersKarel DecaesteckerCharlotte Debbaut

Development of a planning tool for robot-assisted partial nephrectomy surgery based on 3D reconstructions of kidneys

Sarah VandenbulckePieter De BackerDanilo BabinPatrick SegersKarel DecaesteckerCharlotte Debbaut

Estimation of the left ventricle volume using semantic segmentation

Marija HabijanHrvoje LeventicIrena GalicDanilo Babin

Left atrial appendage segmentation and analysis in cardiovascular CT images

Hrvoje LeventićAleksandra PizuricaIrena GalicDanilo Babin

Left atrial appendage segmentation from 3D CCTA images for occluder placement procedure

Hrvoje LeventićDanilo BabinLazar VelickiDaniel DevosIrena GalićVladimir ZlokolicaKrešimir RomićAleksandra Pizurica

A1 Journal Article in COMPUTERS IN BIOLOGY AND MEDICINE

Virtual clamping tool for RAPN

Pieter De BackerSarah VandenbulckeMaryse LejolyStefanie VanderscheldenCharles Van PraetDanilo BabinCharlotte DebbautKarel Decaestecker

Whole heart segmentation from CT images using 3D U-Net architecture

Marija HabijanHrvoje LeventicIrena GalicDanilo Babin

2018

Left Atrial Appendage Segmentation in 3D CCTA Images

Hrvoje LeventićIrena GalićDanilo BabinAleksandra Pizurica

Left atrial appendage segmentation software with detection of occluder placement location

Hrvoje LeventićDanilo BabinLazar VelickiDaniel DevosIrena GalićAleksandra Pizurica

Skeletonization method for vessel delineation of arteriovenous malformation

Danilo BabinAleksandra PizuricaLazar VelickiVladimir MatićIrena GalićHrvoje LeventićVladimir ZlokolicaWilfried Philips

A1 Journal Article in COMPUTERS IN BIOLOGY AND MEDICINE

2017

Proximal aortic stiffening in Turner patients may be present before dilation can be detected : a segmental functional MRI study

Daniel DevosKatya De GrooteDanilo BabinLAURENT DEMULIERYvo TaeymansJos J WestenbergLucas Van BortelPatrick SegersEric AchtenJean De Schepper et al.

A1 Journal Article in JOURNAL OF CARDIOVASCULAR MAGNETIC RESONANCE

Semi-automatic left atrial appendage segmentation from 3D CCTA images

Hrvoje LeventićDanilo BabinLazar VelickiIrena GalićVladimir Zlokolica

Semiautomatic epicardial fat segmentation based on fuzzy c-means clustering and geometric ellipse fitting

Vladimir ZlokolicaLidija KrstanovićLazar VelickiBranislav PopovićMarko JanevRatko ObradovićNebojsa M. RalevićLjubomir JovanovDanilo Babin

A1 Journal Article in JOURNAL OF HEALTHCARE ENGINEERING

2016

Proximal aortic stiffening in Turner patients is more pronounced in the presence of a bicuspid valve : a segmental functional MRI study

Daniel DevosKatya De GrooteDanilo BabinLAURENT DEMULIERYvo TaeymansJos WestenbergLucas Van BortelPatrick SegersEric AchtenJean De Schepper et al.

Validation of 'WaVelocity' image analysis toolbox for cardiac magnetic resonance pulse wave velocity measurements

Danilo BabinDaniel DevosPatrick Segers

2015

4D CT Cardiac image enhancement for Subjective Medical Quality Perception of the Left Ventricle

Hrvoje LeventićČaslav LivadaIrena GalićVladimir ZlokolicaLazar VelickiDanilo BabinRatko ObradovićBogoljub Mihajlović

MR pulse wave velocity increases with age faster in the thoracic aorta than in the abdominal aorta

Daniel DevosErnst RietzschelCATHERINE HEYSEPieter VandemaeleLucas Van BortelDanilo BabinPatrick SegersJos WestenbergEric Achten

A1 Journal Article in JOURNAL OF MAGNETIC RESONANCE IMAGING

2014

Epicardial fat registration by local adaptive morphology-thresholding based 2D segmentation

Vladimir ZlokolicaLazar VelickiMarko JanevDavid MitrinovicDanilo BabinNebojsa RalevicNada Cemerlic-AdicRatko ObradovicIrena Galic

Pixel profiling for extraction of arteriovenous malformation in 3-D CTA images

Danilo BabinMichail SpyrantisAleksandra PizuricaWilfried PhilipsLazar VelickiVladimir Zlokolica

Robust segmentation methods with an application to aortic pulse wave velocity calculation

Danilo BabinDaniel DevosAleksandra PizuricaJos WestenbergEwout VansteenkisteWilfried Philips

A1 Journal Article in COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

Skeleton calculation for automatic extraction of arteriovenous malformation in 3-D CTA images

Danilo BabinMichail SpyrantisAleksandra PizuricaWilfried Philips

2013

Brain blood vessel segmentation using line-shaped profiles

Danilo BabinAleksandra PizuricaJonas De VylderEwout VansteenkisteWilfried Philips

A1 Journal Article in PHYSICS IN MEDICINE AND BIOLOGY

Segmentation and skeletonization techniques for cardiovascular image analysis

Danilo BabinWilfried PhilipsAleksandra Pizurica

2012

A novel dictionary based detection method for cell nuclei

Jonas De VylderJan AeltermanDanilo BabinMado VandewoestyneTrees LepezDieter DeforceWilfried Philips

Centerline calculation for extracting abdominal aorta in 3-D MRI images

Danilo BabinEwout VansteenkisteAleksandra PizuricaWilfried Philips

Generalized pixel profiling and comparative segmentation with application to arteriovenous malformation segmentation

Danilo BabinAleksandra PizuricaRik BellensJohan De BockYanfeng ShangBart GoossensEwout VansteenkisteWilfried Philips

A1 Journal Article in MEDICAL IMAGE ANALYSIS

2011

Robust segmentation methods for aortic pulse wave velocity measurement

Danilo BabinAleksandra PizuricaWilfried Philips

Segmentation of abdominal aorta for pulse wave velocity calculation

Danilo BabinAleksandra PizuricaWilfried Philips

Segmentation of brain blood vessels using projections in 3-D CT angiography images

Danilo BabinEwout VansteenkisteAleksandra PizuricaWilfried Philips

2010

Segmentation of airways in lungs using projections in 3-D CT angiography images

Danilo BabinEwout VansteenkisteAleksandra PizuricaWilfried Philips

2009

Length measurement of abdominal blood vessels through segmentation and skeletonization

Danilo BabinAleksandra PizuricaWilfried Philips

Segmentation and length measurement of the abdominal blood vessels in 3-D MRI images

Danilo BabinEwout VansteenkisteAleksandra PizuricaWilfried Philips

2008

The shortest path calculation between points of interest in 3-D MRI images of blood vessels

Danilo BabinJohan De BockAleksandra PizuricaWilfried Philips