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Researcher
Charlotte Vandeputte
Profile
Projects
Publications
Activities
Awards & Distinctions
22
Results
2023
Cell-free DNA as a diagnostic and prognostic biomarker in pediatric rhabdomyosarcoma
Nathalie S.M. Lak
Lieke M.J. van Zogchel
Lily Zappeij-Kannegieter
Ahmad Javadi
Ruben Van Paemel
Charlotte Vandeputte
Katleen De Preter
Bram De Wilde
Mathieu Chicard
Yasmine Iddir
et al.
A1
Journal Article
in
JCO PRECISION ONCOLOGY
2023
2022
The feasibility of using liquid biopsies as a complementary assay for copy number aberration profiling in routinely collected paediatric cancer patient samples
Ruben Van Paemel
Charlotte Vandeputte
Lennart Raman
Jolien Van Thorre
Leen Willems
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Andries De Koker
Björn Menten
et al.
A1
Journal Article
in
EUROPEAN JOURNAL OF CANCER
2022
2021
Evaluation of a marker independent isolation method for circulating tumor cells in esophageal adenocarcinoma
Annouck Philippron
Lieven Depypere
Steffi Oeyen
Bram De Laere
Charlotte Vandeputte
Philippe Nafteux
Katleen De Preter
Piet Pattyn
A1
Journal Article
in
PLOS ONE
2021
Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
Ruben Van Paemel
Andries De Koker
Charlotte Vandeputte
Lieke van Zogchel
Tim Lammens
Genevieve Laureys
Jo Vandesompele
Gudrun Schleiermacher
Mathieu Chicard
Nadine Van Roy
et al.
A1
Journal Article
in
EPIGENETICS
2021
2020
Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA
Ruben Van Paemel
Andries De Koker
Charlotte Vandeputte
Lieke Van Zogchel
Tim Lammens
Genevieve Laureys
Jo Vandesompele
Gudrun Schleiermacher
Matthieu Chicard
Nadine Van Roy
et al.
C3
Conference
2020
2019
A fast, affordable and minimally-invasive diagnostic test for Cancer of Unknown Primary (CUP) using DNA methylation profiling
Jilke De Wilde
Ruben Van Paemel
Charlotte Vandeputte
Andries De Koker
Joni Van der Meulen
Malaïka Van der Linden
Nico Callewaert
Jo Van Dorpe
David Creytens
Bram De Wilde
et al.
C3
Conference
2019
Faster, cheaper and more accurate diagnosis of cancer of unknown primary (CUP) by using methylation profiling.
Jilke De Wilde
Ruben Van Paemel
Charlotte Vandeputte
Andries De Koker
Joni Van der Meulen
Malaïka Van der Linden
Nico Callewaert
Jo Van Dorpe
David Creytens
Bram De Wilde
et al.
C3
Conference
2019
Minimally invasive classification of pediatric solid tumors using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
Ruben Van Paemel
Andries De Koker
Charlotte Vandeputte
Lieke van Zogchel
Tim Lammens
Genevieve Laureys
Jo Vandesompele
Gudrun Schleiermacher
Mathieu Chicard
Nadine Van Roy
et al.
Preprint
2019
Non-invasive classification of pediatric tumor types using reduced representation bisulfite sequencing of cell-free DNA : a proof-of-principle study
Ruben Van Paemel
A. De Koker
Charlotte Vandeputte
L. M. J. van Zogchel
M. Chicard
Tim Lammens
Jo Vandesompele
Nadine Van Roy
G. Schleiermacher
G. A. M. Tytgat
et al.
C3
Conference
2019
Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
Charlotte Vandeputte
Jolien Van Thorre
Ruben Van Paemel
Andries De Koker
Leen Willems
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
L. van Zogchel
et al.
C3
Conference
2019
Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
Charlotte Vandeputte
Jolien Van Thorre
Ruben Van Paemel
Andries De Koker
Leen Willems
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Lieke van Zogchel
et al.
C3
Conference
2019
Shallow whole genome sequencing on circulating cell-free DNA in pediatric cancer patients
Charlotte Vandeputte
Jolien Van Thorre
Ruben Van Paemel
Andries De Koker
Leen Willems
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Lieke van Zogchel
et al.
C3
Conference
2019
Successful copy number alteration profiling using circulating cell-free tumor DNA as a non-invasive alternative for tissue biopsies in pediatric cancer patients
Charlotte Vandeputte
Jolien Van Thorre
Ruben Van Paemel
Andries De Koker
Leen Willems
Jo Van Dorpe
Malaïka Van der Linden
Jilke De Wilde
Björn Menten
Lieke van Zogchel
et al.
C3
Conference
2019
2018
Non-invasive differential diagnosis of neuroblastoma with other paediatric solid tumors using methylation profiling of circulating cell-free DNA
Ruben Van Paemel
Anneleen Decock
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Franki Speleman
Wim Van Criekinge
Nadine Van Roy
Jo Vandesompele
Katleen De Preter
et al.
C3
Conference
2018
Non-invasive differential diagnosis of neuroblastoma with other paediatric solid tumors using methylation profiling of circulating cell-free DNA
Ruben Van Paemel
Anneleen Decock
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Franki Speleman
Wim Van Criekinge
Nadine Van Roy
Jo Vandesompele
Katleen De Preter
et al.
C3
Conference
2018
Non-invasive differential diagnosis of neuroblastoma with other paediatric solid tumors using methylation profiling of circulating cell-free DNA
Ruben Van Paemel
Anneleen Decock
Charlotte Vandeputte
Tim Lammens
Genevieve Laureys
Franki Speleman
Wim Van Criekinge
Nadine Van Roy
Jo Vandesompele
Katleen De Preter
et al.
C3
Conference
2018
Shallow whole genome sequencing allows successful copy number profiling in formalin-fixed paraffin-embedded material in neuroblastoma patients
Charlotte Vandeputte
Ruben Van Paemel
Bram De Wilde
Malaïka Van der Linden
Jo Van Dorpe
Björn Menten
Franki Speleman
Nadine Van Roy
Katleen De Preter
C3
Conference
2018
The potential of methylome sequencing in the diagnostic work : up of pediatric solid tumors
Ruben Van Paemel
Charlotte Vandeputte
Bram De Wilde
Katleen De Preter
Nadine Van Roy
Jo Vandesompele
Tim Lammens
Wim Van Criekinge
P. Ultz
Nico Callewaert
et al.
C3
Conference
2018
2017
Optimizing a workflow for transcriptome analysis of CTCs isolated from venous blood
Charlotte Vandeputte
Annouck Philippron
Nadine Van Roy
Piet Pattyn
Katleen De Preter
C3
Conference
2017
Optimizing a workflow for transcriptome analysis of CTCs isolated from venous blood
Annouck Philippron
Charlotte Vandeputte
Nadine Van Roy
Piet Pattyn
Katleen De Preter
C3
Conference
2017
Shallow whole genome sequencing on circulating cell-free DNA allows reliable non-invasive copy number profiling in neuroblastoma patients
Nadine Van Roy
Malaïka Van der Linden
Pauline Depuydt
Björn Menten
Annelies Dheedene
Charlotte Vandeputte
Jo Van Dorpe
Genevieve Laureys
Marjolijn Renard
Tom Sante
et al.
C3
Conference
2017
Shallow whole genome sequencing on circulating cell-free DNA allows reliable noninvasive copy-number profiling in neuroblastoma patients
Nadine Van Roy
Malaïka Van der Linden
Björn Menten
Annelies Dheedene
Charlotte Vandeputte
Jo Van Dorpe
Genevieve Laureys
Marleen Renard
Tom Sante
Tim Lammens
et al.
A1
Journal Article
in
CLINICAL CANCER RESEARCH
2017