Research Explorer

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Researcher

Charlotte Peeters

Awards & Distinctions

52 Results

2025

Bridging the diversity between 16S rRNA amplicon sequencing and cultivation studies

Michiel Van de VlietCharlotte PeetersMargo CnockaertLisa JoosMarie JoossensPeter Vandamme

Identification and functional genomic analyses of Bartonella isolates from honey bees, and reassessment of the taxonomy of the genus Bartonella

Juliana Botero CardonaNikolas BaslerMargo CnockaertCharlotte PeetersMaria SchreiberManja MarzDirk de GraafJelle MatthijnssensPeter Vandamme

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Unravelling Listeria monocytogenes persistence in frozen potato processing : insights from whole genome sequencing analysis

Tessa TuytschaeverMarieke MispelaereCharlotte PeetersEvelien De CanckPeter VandammeKatleen RaesPaco HulpiauImca Sampers

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

2024

A comparative genomic analysis of Fructobacillus evanidus sp. nov. from bumble bees

Juliana Botero CardonaCharlotte PeetersEvelien De CanckDavid LaureysAnneleen WiemeIlse CleenwerckEliza DepoorterJessy PraetDenis MichezGuy Smagghe et al.

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Accurate Strain Identification and Characterization are Essential for an Optimal Valorization Trajectory.

Anneleen WiemeEliza DepoorterIlse CleenwerckCharlotte PeetersAnn HellemansPeter Vandamme

Eupransor demetentiae gen. nov., sp. nov., a novel fructophilic lactic acid bacterium from bumble bees

Juliana Botero CardonaCharlotte PeetersEvelien De CanckDavid LaureysPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Novel Ralstonia species from human infections : improved matrix-assisted laser desorption/ionization time-of-flight mass spectrometry-based identification and analysis of antimicrobial resistance patterns

Stephanie SteyaertCharlotte PeetersAnneleen WiemeAstrid MuyldermansKristof VandoorslaerTheodore SpilkerIngrid WyboDenis PiérardJohn J. LiPumaPeter Vandamme

A1 Journal Article in MICROBIOLOGY SPECTRUM

StrainInSight: a Unique Private Strain Collection and Innovative Tools to Facilitate Novel Strain Discovery.

Eliza DepoorterAnneleen WiemeCharlotte PeetersIlse CleenwerckAnn HellemansPeter Vandamme

StrainInSight: a unique private strain collection and innovative tools for novel strain discovery.

Charlotte PeetersAnneleen WiemeMaaike PerneelEliza DepoorterIlse CleenwerckAnn HellemansPeter Vandamme

2023

A phylogenomic and comparative genomic analysis of Commensalibacter, a versatile insect symbiont

Juliana Botero CardonaAtena Sadat SombolestaniMargo CnockaertCharlotte PeetersWim BorremansLuc De VuystNicolas J. VereeckenDenis MichezGuy SmaggheGerman Bonilla-Rosso et al.

A2 Journal Article in ANIMAL MICROBIOME

Govania unica gen. nov., sp. nov., a rare biosphere bacterium that represents a novel family in the class Alphaproteobacteria

Peter VandammeCharlotte PeetersGowri Amanda HettiarachchiMargo CnockaertAurélien Carlier

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

In vitro susceptibility of Achromobacter species isolated from cystic fibrosis patients : a 6-year survey

Margo OlbrechtFedoua EchahidiDenis PiérardCharlotte PeetersPeter VandammeIngrid WyboThomas Demuyser

A1 Journal Article in ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Search for novel bacteria to valorize in the food industry : a culturomics approach

Anneleen WiemeCharlotte PeetersEliza DepoorterPeter Vandamme

StrainInSight : a unique genome database to facilitate novel strain discovery for the food industry

Eliza DepoorterAnneleen WiemeCharlotte PeetersVimac Nolla ArdèvolAnn HellemansFabienne VertéPeter Vandamme

StrainInSight : a unique private strain collection and innovative tools to facilitate novel strain discovery in the food and feed industry

Charlotte PeetersEliza DepoorterAnneleen WiemeIlse CleenwerckAnn HellemansPeter Vandamme

2022

Campylobacter majalis sp. nov. and Campylobacter suis sp. nov., novel Campylobacter species isolated from porcine gastrointestinal mucosa

Caoimhe LynchCharlotte PeetersNiamh WalshConor McCarthyAidan CoffeyBrigid LuceyPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Description of Pseudoclavibacter triregionum sp. nov. from human blood and Pseudoclavibacter albus comb. nov., and revised classification of the genus Pseudoclavibacter : proposal of Caespitibacter gen. nov., with Caespitibacter soli comb. nov. and Caespitibacter caeni comb. nov

Peter VandammeCharlotte PeetersHelena M. B. Seth-SmithHanna SchmidMargo CnockaertAdrian EgliDaniel Goldenberger

A1 Journal Article in ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Paraburkholderia gardini sp. nov. and Paraburkholderia saeva sp. nov. : novel aromatic compound degrading bacteria isolated from garden and forest soil samples

Sarah VanwijnsbergheCharlotte PeetersMargo CnockaertEvelien De CanckPeter Vandamme

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

2021

Burkholderia perseverans sp. nov., a bacterium isolated from the Restinga ecosystem, is a producer of volatile and diffusible compounds that inhibit plant pathogens

Jackeline Pereira AndradeHarisson Guimarães de SouzaLarissa Carvalho FerreiraMargo CnockaertEvelien De CanckAnneleen WiemeCharlotte PeetersEduardo GrossJorge Teodoro De SouzaPhellippe Arthur Santos Marbach et al.

A1 Journal Article in BRAZILIAN JOURNAL OF MICROBIOLOGY

Development of a database for the rapid and accurate routine identification of Achromobacter species by matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS)

T GarrigosC NeuwirthA ChapuisJ BadorL AmoureuxE BarbierJ CaillonE Cardot-MartinV CattoirA Doléans-Jordheim et al.

A1 Journal Article in CLINICAL MICROBIOLOGY AND INFECTION

Genomic aromatic compound degradation potential of novel Paraburkholderia species : Paraburkholderia domus sp. nov., Paraburkholderia haematera sp. nov. and Paraburkholderia nemoris sp. nov.

Sarah VanwijnsbergheCharlotte PeetersEmmelie De RidderCharles DumolinAnneleen WiemeNico BoonPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity

Cédric LoodCharlotte PeetersQuentin Lamy-BesnierJeroen WagemansDaniel De VosMarijke ProesmansJean-Paul PirnayFedoua EchahidiDenis PiérardMatthieu Thimmesch et al.

A1 Journal Article in PLOS PATHOGENS

Gulosibacter hominis sp. nov. : a novel human microbiome bacterium that may cause opportunistic infections

Peter VandammeCharlotte PeetersHelena M. B. Seth-SmithLukas GrafMargo CnockaertAdrian EgliDaniel Goldenberger

A1 Journal Article in ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Matrix-assisted laser desorption ionization–time of flight mass spectrometry for rapid detection of isolates belonging to the epidemic clones Achromobacter xylosoxidans ST137 and Achromobacter ruhlandii DES from cystic fibrosis patients

Thomas GarrigosManon DollatArnaud MagallonAngélique ChapuisVéronique VarinJulien BadorNadia MakkiLise CremetElise PersynEmilie Cardot-Martin et al.

A1 Journal Article in JOURNAL OF CLINICAL MICROBIOLOGY

Network analysis based on unique spectral features enables an efficient selection of genomically diverse operational isolation units

Charles DumolinCharlotte PeetersEvelien De CanckNico BoonPeter Vandamme

A1 Journal Article in MICROORGANISMS

Paraburkholderia dioscoreae sp. nov. : a novel plant associated growth promotor

Johannes B.. HerpellSarah VanwijnsbergheCharlotte PeetersFlorian SchindlerLena FragnerMersad BejtovićWolfram WeckwerthPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

2020

Achromobacter veterisilvae sp. nov., from a mixed hydrogen-oxidizing bacteria enrichment reactor for microbial protein production

Charles DumolinCharlotte PeetersElham EhsaniGuillaume TahonEvelien De CanckMargo CnockaertNico BoonPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Burkholderia cepacia complex taxon K : where to split?

Eliza DepoorterEvelien De CanckCharlotte PeetersAnneleen WiemeMargo CnockaertJames E. A. ZlosnikJohn J. LiPumaTom CoenyePeter Vandamme

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

Genome sequence-based curation of PubMLST data challenges interspecies recombination in the Burkholderia cepacia complex

Charlotte PeetersEliza DepoorterEvelien De CanckPeter Vandamme

Editorial material

Micromonospora fluminis sp. nov., isolated from mountain river sediment

Miladis Isabel Camacho PozoAnneleen WiemeSuyén Rodríguez PérezGabriel Llauradó MauryCharlotte PeetersCindy SnauwaertYaneisy Lescaylle VeranesLeonor Peña ZamoraPeter SchumannPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

2019

Comparative genomics of Pandoraea, a genus enriched in xenobiotic biodegradation and metabolism

Charlotte PeetersEvelien De CanckMargo CnockaertEvie De BrandtCindy SnauwaertBart VerheydeEliza DepoorterTheodore SpilkerJohn J LiPumaPeter Vandamme

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

2018

Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean bug Riptortus pedestris

Kazutaka TakeshitaHideyuki TamakiTsubasa OhbayashiXian-Ying MengTeruo SoneYasuo MitaniCharlotte PeetersYoshitomo KikuchiPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

In vitro susceptibility of Burkholderia cepacia complex isolated from cystic fibrosis patients to ceftazidime-avibactam and ceftolozane-tazobactam

A Van DalemM HerpolF EchahidiCharlotte PeetersI WyboE De WachterPeter VandammeD Piérard

A1 Journal Article in ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

2017

Comparative genomics of Burkholderia multivorans, a ubiquitous pathogen with a highly conserved genomic structure

Charlotte PeetersVaughn S CooperPhilip J HatcherBart VerheydeAurélien CarlierPeter Vandamme

A1 Journal Article in PLOS ONE

Comparative genomics of Burkholderia singularis sp. nov., a low G+C content, free-living bacterium that defies taxonomic dissection of the genus Burkholderia

Peter VandammeCharlotte PeetersBirgit De SmetErin P PriceDerek S SarovichDeborah A HenryTrevor J HirdJames EA ZlosnikMark MayoJeffrey Warner et al.

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

2016

Burkholderia : an update on taxonomy and biotechnological potential as antibiotic producers

Eliza DepoorterMatt J BullCharlotte PeetersTom CoenyePeter VandammeEshwar Mahenthiralingam

A1 Journal Article in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Burkholderia multivorans and beyond : epidemiology, genomics and taxonomy of opportunistic pathogens in cystic fibrosis patients

Charlotte PeetersPeter Vandamme

Extensive cultivation of soil and water samples yields various pathogens in patients with cystic fibrosis but not Burkholderia multivorans

Charlotte PeetersEliza DepoorterJessy PraetPeter Vandamme

A1 Journal Article in JOURNAL OF CYSTIC FIBROSIS

PCR detection of Burkholderia multivorans in water and soil samples

Charlotte PeetersStijn DaenekindtPeter Vandamme

A1 Journal Article in BMC MICROBIOLOGY

Phylogenomic study of Burkholderia glathei-like organisms, proposal of 13 novel Burkholderia species and emended descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae

Charlotte PeetersJan P Meier-KolthoffBart VerheydeEvie De BrandtVaughn S CooperPeter Vandamme

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

Reclassification of Achromobacter spiritinus Vandamme et al. 2013 as a later heterotypic synonym of Achromobacter marplatensis Gomila et al. 2011

Peter VandammeCharlotte PeetersMargo CnockaertMargarita GomilaEdward RB MooreTheodore SpilkerJohn J LiPuma

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Taxonomic dissection of Achromobacter denitrificans Coenye et al. 2003 and proposal of Achromobacter agilis sp. nov., nom. rev., Achromobacter pestifer sp. nov., nom. rev., Achromobacter kerstersii sp. nov. and Achromobacter deleyi sp. nov.

Peter VandammeCharlotte PeetersElisabeth InganäsMargo CnockaertKurt HoufTheodore SpilkerEdward RB MooreJohn J LiPuma

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

2015

Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov.

Peter VandammeCharlotte PeetersMargo CnockaertElisabeth InganäsEnevold FalsenEdward RB MooreOlga C NunesCélia M ManaiaTheodore SpilkerJohn J LiPuma

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Burkholderia stagnalis sp. nov. and Burkholderia territorii sp. nov., two novel Burkholderia cepacia complex species from environmental and human sources

Birgit De SmetMark MayoCharlotte PeetersJames EA ZlosnikTheodore SpilkerTrevor J HirdJohn J LiPumaTimothy J KiddMirjam KaestliJennifer L Ginther et al.

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

2014

Burkholderia cordobensis sp. nov., from agricultural soils

Walter O DraghiCharlotte PeetersMargo CnockaertCindy SnauwaertLuis G WallAngeles ZorreguietaPeter Vandamme

A1 Journal Article in INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genomic taxonomy and biodiversity of the Burkholderia cepacia complex

Peter VandammeBart VerheydeCharlotte PeetersPeter Dawyndt

Bookchapter in Burkholderia : from genomes to function

Intraspecific variation in Burkholderia caledonica: Europe vs. Africa and soil vs. endophytic isolates

Brecht VerstraeteCharlotte PeetersBraam van WykErik SmetsSteven DesseinPeter Vandamme

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Time to revisit polyphasic taxonomy

Peter VandammeCharlotte Peeters

A1 Journal Article in ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

2013

Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere

Charlotte PeetersJames EA ZlosnikTheodore SpilkerTrevor J HirdJohn J LipumaPeter Vandamme

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Classification of Achromobacter genogroups 2, 5, 7 and 14 as Achromobacter insuavis sp. nov., Achromobacter aegrifaciens sp. nov., Achromobacter anxifer sp. nov. and Achromobacter dolens sp. nov., respectively

Peter VandammeEdward RB MooreMargo CnockaertCharlotte PeetersLiselott Svensson-StadlerKurt HoufTheodore SpilkerJohn J Lipuma

A1 Journal Article in SYSTEMATIC AND APPLIED MICROBIOLOGY

Outbreak of Burkholderia cepacia bloodstream infections traced to the use of Ringer lactate solution as multiple-dose vial for catheter flushing, Phnom Penh, Cambodia

B De SmetC VengL KruyC KhamJ van GriensvenCharlotte PeetersS IengT PheE VlieghePeter Vandamme et al.

A1 Journal Article in CLINICAL MICROBIOLOGY AND INFECTION

2011

Polyphasic identification of Staphylococcus species isolated from raw milk cheeses: matrix-assisted laser desorption/ionization-time of flight mass spectrometry as an alternative identification tool

Koenraad Van HoordeCharlotte PeetersPeter VandammeAnita Van Landschoot