Research Explorer

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Researcher

Bavo Verhaegen

Awards & Distinctions

12 Results

2024

Strain-level characterization of foodborne pathogens without culture enrichment for outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

Florence BuytaersBavo VerhaegenTom Van NieuwenhuysenNancy H. C. RoosensKevin VannesteKathleen MarchalSigrid C. J. De Keersmaecker

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

2023

Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices

Stéphanie NouwsBavo VerhaegenSarah DenayerFlorence CrombéDenis PiérardBert BogaertsKevin VannesteKathleen MarchalNancy H. C. RoosensSigrid C. J. De Keersmaecker

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

2022

Metagenomics to detect and characterize viruses in food samples at genome level? Lessons learnt from a norovirus study

Florence BuytaersBavo VerhaegenMathieu GandJolien D'aesKevin VannesteNancy H. C. RoosensKathleen MarchalSarah DenayerSigrid C. J. De Keersmaecker

A1 Journal Article in FOODS

2021

Towards real-time and affordable strain-level metagenomics-based foodborne outbreak investigations using Oxford nanopore sequencing technologies

Florence BuytaersAssia SaltykovaSarah DenayerBavo VerhaegenKevin VannesteNancy H. C. RoosensDenis PierardKathleen MarchalSigrid C. J. De Keersmaecker

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

Whole genome sequencing provides an added value to the investigation of staphylococcal food poisoning outbreaks

Stéphanie NouwsBert BogaertsBavo VerhaegenSarah DenayerLasse LaeremansKathleen MarchalNancy H. C. RoosensKevin VannesteSigrid C. J. De Keersmaecker

A1 Journal Article in FRONTIERS IN MICROBIOLOGY

2016

Comparison of droplet digital PCR and qPCR for the quantification of Shiga toxin-producing Escherichia coli in bovine feces

Bavo VerhaegenKoen De ReuLieven De ZutterKaren VerstraeteMarc HeyndrickxEls Van Coillie

A1 Journal Article in TOXINS

Detection and isolation of human pathogenic non-O157 Shiga toxin-producing Escherichia coli (STEC) in food : a needle in a haystack

Bavo VerhaegenLieven De ZutterKoen De ReuMarc Heyndrickx

Evaluation of detection methods for non-O157 Shiga toxin-producing Escherichia coli from food

Bavo VerhaegenInge Van DammeMarc HeyndrickxNadine BotteldoornMohamed ElhadidyKaren VerstraeteKatelijne DierickSarah DenayerLieven De ZutterKoen De Reu

A1 Journal Article in INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

2015

Comparison of six chromogenic agar media for the isolation of a broad variety of non-O157 shigatoxin-producing Escherichia coli (STEC) serogroups

Bavo VerhaegenKoen De ReuMarc HeyndrickxLieven De Zutter

A1 Journal Article in INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH

Genetic diversity of Shiga toxin-producing Escherichia coli O157: H7 recovered from human and food sources

Mohamed ElhadidyWalid F ElkhatibEman A Abo ElfadlKaren VerstraeteSarah DenayerElodie Barbau-PiednoirLieven De ZutterBavo VerhaegenKlara De RauwDenis Pierard et al.

A1 Journal Article in MICROBIOLOGY-SGM

Growth of stressed strains of four non-O157 Shiga toxin–producing Escherichia coli serogroups in five enrichment broths

Bavo VerhaegenKoen De ReuMarc HeyndrickxInge Van DammeLieven De Zutter

A1 Journal Article in JOURNAL OF FOOD PROTECTION

2014

Evaluation of a new chromogenic medium for direct enumeration of Campylobacter in poultry meat samples

Tomasz SeliwiorstowJulie BaréBavo VerhaegenMieke UyttendaeleLieven De Zutter

A1 Journal Article in JOURNAL OF FOOD PROTECTION