Research Explorer

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Researcher

Annelies Emmaneel

Publications & Research Data

Awards & Distinctions

11 Results

2026

PIDgeon : an explainable AI model for improved flow cytometry-based screening of lymphoid primary immunodeficiencies

Annelies EmmaneelJana NeirinckAlba Torres-ValleSofie Van GassenSarah BonteMalicorne BuysseJacques J. M. Van DongenAlberto OrfaoMirjam Van Der BurgTomas Kalina et al.

A1 Journal Article in CLINICAL CHEMISTRY

2025

Unraveling genotype–phenotype associations and predictive modeling of outcome in acute myeloid leukemia

Artuur CouckuytSofie Van GassenAnnelies EmmaneelVince JandaMalicorne BuysseIne MoorsJan PhilippéMattias HofmansTessa KerreYvan Saeys et al.

A1 Journal Article in CYTOMETRY PART B-CLINICAL CYTOMETRY

2023

LXR signaling controls homeostatic dendritic cell maturation

Victor BosteelsSandra MaréchalClint De NolfSofie RennenJonathan MaelfaitSimon TavernierJessica VettersEvelien Van De VeldeFarzaneh FayazpourKim Deswarte et al.

A1 Journal Article in SCIENCE IMMUNOLOGY

2022

Challenges in translational machine learning

Artuur CouckuytRuth SeurinckAnnelies EmmaneelKatrien QuintelierDavid NovákSofie Van GassenYvan Saeys

A1 Journal Article in HUMAN GENETICS

Improving diagnosis of primary immunodeficiencies using computional cytometry

Annelies EmmaneelYvan SaeysSofie Van Gassen

PeacoQC : peak-based selection of high quality cytometry data

Annelies EmmaneelKatrien QuintelierDorine SichienPaulina RybakowskaConcepcion MaranonMarta E. Alarcon-RiquelmeGert Van IsterdaelSofie Van GassenYvan Saeys

A1 Journal Article in CYTOMETRY PART A

The Euroflow PID Orientation Tube in the diagnostic workup of primary immunodeficiency : daily practice performance in a tertiary university hospital

Jana NeirinckAnnelies EmmaneelMalicorne BuysseJan PhilippéSofie Van GassenYvan SaeysXavier BossuytStefanie De BuyserMirjam van der BurgMartin Perez-Andres et al.

A1 Journal Article in FRONTIERS IN IMMUNOLOGY

2021

Analyzing high-dimensional cytometry data using FlowSOM

Katrien QuintelierArtuur CouckuytAnnelies EmmaneelJoachim AertsYvan SaeysSofie Van Gassen

A1 Journal Article in NATURE PROTOCOLS

High dimensional profiling identifies specific immune types along the recovery trajectories of critically ill COVID19 patients

P. A. PenttilaSofie Van GassenD. PanovskaL. VanderbekeY. Van HerckKatrien QuintelierAnnelies EmmaneelJ. FiltjensB. Malengier-DevliesK. Ahmadzadeh et al.

A1 Journal Article in CELLULAR AND MOLECULAR LIFE SCIENCES

Monocyte-driven atypical cytokine storm and aberrant neutrophil activation as key mediators of COVID-19 disease severity

L. VanderbekeP. Van MolY. Van HerckF. De SmetS. Humblet-BaronK. MartinodA. AntoranzI. ArijsB. BoeckxF. M. Bosisio et al.

A1 Journal Article in NATURE COMMUNICATIONS

2019

A computational pipeline for the diagnosis of CVID patients

Annelies EmmaneelDelfien BogaertSofie Van GassenSimon TavernierMelissa DullaersFilomeen HaerynckYvan Saeys

A1 Journal Article in FRONTIERS IN IMMUNOLOGY